RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 VASPP50552 380 aaPredicted RBP9.38□□□□□ -0.91
CKS1B-205ENST00000473344 HTRA3P83110 453 aa9.38□□□□□ -0.91
CKS1B-205ENST00000473344 DNAJC10Q8IXB1 793 aa9.38□□□□□ -0.91
CKS1B-205ENST00000473344 SMC1BQ8NDV3 1235 aa9.38□□□□□ -0.91
CKS1B-205ENST00000473344 KLRG1Q96E93 195 aa9.38□□□□□ -0.91
CKS1B-205ENST00000473344 SOS1Q07889 1333 aaPredicted RBP9.37□□□□□ -0.91
CKS1B-205ENST00000473344 ZC3H4Q9UPT8 1303 aaKnown RBP9.37□□□□□ -0.91
CKS1B-205ENST00000473344 CYP19A1P11511 503 aaPredicted RBP9.37□□□□□ -0.91
CKS1B-205ENST00000473344 LMNB1P20700 586 aa9.37□□□□□ -0.91
CKS1B-205ENST00000473344 TMEM121BQ9BXQ6 578 aaPredicted RBP9.37□□□□□ -0.91
CKS1B-205ENST00000473344 LGR6Q9HBX8 967 aa9.37□□□□□ -0.91
CKS1B-205ENST00000473344 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.37□□□□□ -0.91
CKS1B-205ENST00000473344 NARFQ9UHQ1 456 aa9.37□□□□□ -0.91
CKS1B-205ENST00000473344 COL15A1P39059 1388 aa9.37□□□□□ -0.91
CKS1B-205ENST00000473344 H0YIN7 160 aa9.36□□□□□ -0.91
CKS1B-205ENST00000473344 SERPINB2P05120 415 aa9.36□□□□□ -0.91
CKS1B-205ENST00000473344 HMOX1P09601 288 aa9.36□□□□□ -0.91
CKS1B-205ENST00000473344 RASSF7Q02833 373 aa9.36□□□□□ -0.91
CKS1B-205ENST00000473344 GOLGA2Q08379 1002 aa9.36□□□□□ -0.91
CKS1B-205ENST00000473344 SLC39A6Q13433 755 aa9.36□□□□□ -0.91
CKS1B-205ENST00000473344 NFIXQ14938 502 aa9.36□□□□□ -0.91
CKS1B-205ENST00000473344 NPM2Q86SE8 214 aaKnown RBP9.36□□□□□ -0.91
CKS1B-205ENST00000473344 TTC5Q8N0Z6 440 aa9.36□□□□□ -0.91
CKS1B-205ENST00000473344 TTLL6Q8N841 843 aa9.36□□□□□ -0.91
CKS1B-205ENST00000473344 TJP1Q07157 1748 aa9.36□□□□□ -0.91
CKS1B-205ENST00000473344 WDR90Q96KV7 1748 aa9.36□□□□□ -0.91
CKS1B-205ENST00000473344 GLTPD2A6NH11 291 aa9.35□□□□□ -0.91
CKS1B-205ENST00000473344 RNMTO43148 476 aaKnown RBP9.35□□□□□ -0.91
CKS1B-205ENST00000473344 STARD3NLO95772 234 aa9.35□□□□□ -0.91
CKS1B-205ENST00000473344 VEGFAP15692 232 aaPredicted RBP9.35□□□□□ -0.91
CKS1B-205ENST00000473344 CANXP27824 592 aaKnown RBP9.35□□□□□ -0.91
CKS1B-205ENST00000473344 BRCA1P38398 1863 aaKnown RBP9.35□□□□□ -0.91
CKS1B-205ENST00000473344 BICDL1Q6ZP65 573 aa9.35□□□□□ -0.91
CKS1B-205ENST00000473344 C2CD5Q86YS7 1000 aa9.35□□□□□ -0.91
CKS1B-205ENST00000473344 VSIG10Q8N0Z9 540 aa9.35□□□□□ -0.91
CKS1B-205ENST00000473344 JMYQ8N9B5 988 aa9.35□□□□□ -0.91
CKS1B-205ENST00000473344 PCDHB8Q9UN66 801 aa9.35□□□□□ -0.91
CKS1B-205ENST00000473344 ZBTB1Q9Y2K1 713 aa9.35□□□□□ -0.91
CKS1B-205ENST00000473344 ARFGEF1Q9Y6D6 1849 aa9.35□□□□□ -0.91
CKS1B-205ENST00000473344 A0A087WZG4 1122 aa9.34□□□□□ -0.91
CKS1B-205ENST00000473344 NPHP1O15259 732 aa9.34□□□□□ -0.91
CKS1B-205ENST00000473344 ST18O60284 1047 aa9.34□□□□□ -0.91
CKS1B-205ENST00000473344 DIAPH1O60610 1272 aaKnown RBP9.34□□□□□ -0.91
CKS1B-205ENST00000473344 MTHFSDQ2M296 383 aaKnown RBP9.34□□□□□ -0.91
CKS1B-205ENST00000473344 DPY19L2Q6NUT2 758 aa9.34□□□□□ -0.91
CKS1B-205ENST00000473344 CDAN1Q8IWY9 1227 aa9.34□□□□□ -0.91
CKS1B-205ENST00000473344 ZNF330Q9Y3S2 320 aaPredicted RBP9.34□□□□□ -0.91
CKS1B-205ENST00000473344 MYH14Q7Z406 1995 aaKnown RBP9.33□□□□□ -0.92
CKS1B-205ENST00000473344 TNRC6CQ9HCJ0 1690 aaKnown RBP9.33□□□□□ -0.92
CKS1B-205ENST00000473344 TEFQ10587 303 aa9.33□□□□□ -0.92
CKS1B-205ENST00000473344 MKRN3Q13064 507 aaKnown RBP9.33□□□□□ -0.92
CKS1B-205ENST00000473344 COL13A1Q5TAT6 717 aaPredicted RBP9.33□□□□□ -0.92
CKS1B-205ENST00000473344 ZNF622Q969S3 477 aaKnown RBP eCLIP9.33□□□□□ -0.92
CKS1B-205ENST00000473344 L3MBTL3Q96JM7 780 aaPredicted RBP9.33□□□□□ -0.92
CKS1B-205ENST00000473344 CENPBP07199 599 aaPredicted RBP9.32□□□□□ -0.92
CKS1B-205ENST00000473344 PDE6BP35913 854 aa9.32□□□□□ -0.92
CKS1B-205ENST00000473344 AMER1Q5JTC6 1135 aaPredicted RBP9.32□□□□□ -0.92
CKS1B-205ENST00000473344 TNS4Q8IZW8 715 aa9.32□□□□□ -0.92
CKS1B-205ENST00000473344 CCER1Q8TC90 406 aaPredicted RBP9.32□□□□□ -0.92
CKS1B-205ENST00000473344 TEX13AQ9BXU3 409 aaPredicted RBP9.32□□□□□ -0.92
CKS1B-205ENST00000473344 BCL2L12Q9HB09 334 aa9.32□□□□□ -0.92
CKS1B-205ENST00000473344 PDZRN3Q9UPQ7 1066 aa9.32□□□□□ -0.92
CKS1B-205ENST00000473344 MRC1P22897 1456 aa9.32□□□□□ -0.92
CKS1B-205ENST00000473344 SCN11AQ9UI33 1791 aa9.32□□□□□ -0.92
CKS1B-205ENST00000473344 U2SURPO15042 1029 aaKnown RBP9.31□□□□□ -0.92
CKS1B-205ENST00000473344 C21orf2O43822 256 aa9.31□□□□□ -0.92
CKS1B-205ENST00000473344 EIF5P55010 431 aaKnown RBP9.31□□□□□ -0.92
CKS1B-205ENST00000473344 ERFEQ4G0M1 354 aa9.31□□□□□ -0.92
CKS1B-205ENST00000473344 CC2D1BQ5T0F9 858 aaKnown RBP9.31□□□□□ -0.92
CKS1B-205ENST00000473344 BRIP1Q9BX63 1249 aa9.31□□□□□ -0.92
CKS1B-205ENST00000473344 ADAMTS7Q9UKP4 1686 aa9.31□□□□□ -0.92
CKS1B-205ENST00000473344 CARMIL3Q8ND23 1372 aa9.3□□□□□ -0.92
CKS1B-205ENST00000473344 GNAT3A8MTJ3 354 aa9.3□□□□□ -0.92
CKS1B-205ENST00000473344 NFKBIEO00221 500 aa9.3□□□□□ -0.92
CKS1B-205ENST00000473344 PRELPP51888 382 aa9.3□□□□□ -0.92
CKS1B-205ENST00000473344 CNGB1Q14028 1251 aaPredicted RBP9.3□□□□□ -0.92
CKS1B-205ENST00000473344 TBC1D9BQ66K14 1250 aa9.3□□□□□ -0.92
CKS1B-205ENST00000473344 ZNF790Q6PG37 636 aa9.3□□□□□ -0.92
CKS1B-205ENST00000473344 GAS2L2Q8NHY3 880 aa9.3□□□□□ -0.92
CKS1B-205ENST00000473344 SETDB2Q96T68 719 aa9.3□□□□□ -0.92
CKS1B-205ENST00000473344 TBC1D2BQ9UPU7 963 aa9.3□□□□□ -0.92
CKS1B-205ENST00000473344 HEG1Q9ULI3 1381 aa9.29□□□□□ -0.92
CKS1B-205ENST00000473344 HSPA1AP0DMV8 641 aaKnown RBP9.29□□□□□ -0.92
CKS1B-205ENST00000473344 HSPA1BP0DMV9 641 aaKnown RBP9.29□□□□□ -0.92
CKS1B-205ENST00000473344 IL6STP40189 918 aaPredicted RBP9.29□□□□□ -0.92
CKS1B-205ENST00000473344 ST5P78524 1137 aa9.29□□□□□ -0.92
CKS1B-205ENST00000473344 CCDC24Q8N4L8 307 aa9.29□□□□□ -0.92
CKS1B-205ENST00000473344 CNBD1Q8NA66 436 aa9.29□□□□□ -0.92
CKS1B-205ENST00000473344 ZNF496Q96IT1 587 aaPredicted RBP9.29□□□□□ -0.92
CKS1B-205ENST00000473344 FMNL2Q96PY5 1086 aa9.29□□□□□ -0.92
CKS1B-205ENST00000473344 TAOK3Q9H2K8 898 aa9.29□□□□□ -0.92
CKS1B-205ENST00000473344 KIF7Q2M1P5 1343 aa9.29□□□□□ -0.92
CKS1B-205ENST00000473344 NRXN2Q9P2S2 1712 aa9.28□□□□□ -0.92
CKS1B-205ENST00000473344 SOGA3Q5TF21 947 aa9.28□□□□□ -0.92
CKS1B-205ENST00000473344 PRR5LQ6MZQ0 368 aa9.28□□□□□ -0.92
CKS1B-205ENST00000473344 C3orf67Q6ZVT6 689 aa9.28□□□□□ -0.92
CKS1B-205ENST00000473344 CNKSR1Q969H4 720 aa9.28□□□□□ -0.92
CKS1B-205ENST00000473344 AFDNP55196 1824 aaKnown RBP9.27□□□□□ -0.93
CKS1B-205ENST00000473344 BTBD11A6QL63 1104 aa9.27□□□□□ -0.93
CKS1B-205ENST00000473344 A1BGP04217 495 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms