RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 CHD1LQ86WJ1 897 aa18.2■□□□□ 0.5
HIF3A-206ENST00000472815 NBPF15Q8N660 670 aa18.2■□□□□ 0.5
HIF3A-206ENST00000472815 LRRFIP2Q9Y608 721 aaKnown RBP18.2■□□□□ 0.5
HIF3A-206ENST00000472815 CICQ96RK0 1608 aaPredicted RBP18.2■□□□□ 0.5
HIF3A-206ENST00000472815 ATP8B2P98198 1209 aa18.2■□□□□ 0.5
HIF3A-206ENST00000472815 ANKRD45Q5TZF3 282 aa18.2■□□□□ 0.5
HIF3A-206ENST00000472815 GRM8O00222 908 aa18.19■□□□□ 0.5
HIF3A-206ENST00000472815 PIP4K2AP48426 406 aaPredicted RBP18.19■□□□□ 0.5
HIF3A-206ENST00000472815 MYD88Q99836 296 aa18.19■□□□□ 0.5
HIF3A-206ENST00000472815 EP400Q96L91 3159 aa18.19■□□□□ 0.5
HIF3A-206ENST00000472815 TJP1Q07157 1748 aa18.19■□□□□ 0.5
HIF3A-206ENST00000472815 NUP188Q5SRE5 1749 aa18.19■□□□□ 0.5
HIF3A-206ENST00000472815 ZNF831Q5JPB2 1677 aa18.18■□□□□ 0.5
HIF3A-206ENST00000472815 KIF6Q6ZMV9 814 aa18.18■□□□□ 0.5
HIF3A-206ENST00000472815 UTYO14607 1347 aa18.18■□□□□ 0.5
HIF3A-206ENST00000472815 PALLDQ8WX93 1383 aa18.18■□□□□ 0.5
HIF3A-206ENST00000472815 NEURL1BA8MQ27 555 aa18.18■□□□□ 0.5
HIF3A-206ENST00000472815 CWF19L2Q2TBE0 894 aaKnown RBP18.18■□□□□ 0.5
HIF3A-206ENST00000472815 SKAP1Q86WV1 359 aa18.18■□□□□ 0.5
HIF3A-206ENST00000472815 NBPF7P0C2Y1 421 aaPredicted RBP18.17■□□□□ 0.5
HIF3A-206ENST00000472815 CYP19A1P11511 503 aaPredicted RBP18.17■□□□□ 0.5
HIF3A-206ENST00000472815 NHSQ6T4R5 1651 aa18.17■□□□□ 0.5
HIF3A-206ENST00000472815 LOC102724428A0A0B4J2F2 783 aa18.16■□□□□ 0.5
HIF3A-206ENST00000472815 PDE4AP27815 886 aa18.16■□□□□ 0.5
HIF3A-206ENST00000472815 ATP6V1AP38606 617 aa18.16■□□□□ 0.5
HIF3A-206ENST00000472815 SIK1P57059 783 aa18.16■□□□□ 0.5
HIF3A-206ENST00000472815 GCKRQ14397 625 aa18.16■□□□□ 0.5
HIF3A-206ENST00000472815 FAM161AQ3B820 660 aa18.16■□□□□ 0.5
HIF3A-206ENST00000472815 LNPKQ9C0E8 428 aa18.16■□□□□ 0.5
HIF3A-206ENST00000472815 IGKV5-2P06315 115 aa18.15■□□□□ 0.5
HIF3A-206ENST00000472815 FAM196AQ6ZSG2 479 aa18.15■□□□□ 0.5
HIF3A-206ENST00000472815 IL6STP40189 918 aaPredicted RBP18.15■□□□□ 0.5
HIF3A-206ENST00000472815 ZNF330Q9Y3S2 320 aaPredicted RBP18.15■□□□□ 0.5
HIF3A-206ENST00000472815 MTX1Q13505 466 aa18.14■□□□□ 0.49
HIF3A-206ENST00000472815 HSP90AB4PQ58FF6 505 aa18.14■□□□□ 0.49
HIF3A-206ENST00000472815 TTLL7Q6ZT98 887 aa18.14■□□□□ 0.49
HIF3A-206ENST00000472815 SSH3Q8TE77 659 aa18.14■□□□□ 0.49
HIF3A-206ENST00000472815 SLC4A9Q96Q91 983 aa18.14■□□□□ 0.49
HIF3A-206ENST00000472815 BACH2Q9BYV9 841 aa18.14■□□□□ 0.49
HIF3A-206ENST00000472815 RBM19Q9Y4C8 960 aaKnown RBP18.14■□□□□ 0.49
HIF3A-206ENST00000472815 SRGAP3O43295 1099 aa18.13■□□□□ 0.49
HIF3A-206ENST00000472815 HSP90AB3PQ58FF7 597 aa18.13■□□□□ 0.49
HIF3A-206ENST00000472815 FAM182BQ5T319 152 aa18.13■□□□□ 0.49
HIF3A-206ENST00000472815 CCDC191Q8NCU4 936 aa18.13■□□□□ 0.49
HIF3A-206ENST00000472815 BTAF1O14981 1849 aa18.12■□□□□ 0.49
HIF3A-206ENST00000472815 PPP1R42Q7Z4L9 355 aa18.12■□□□□ 0.49
HIF3A-206ENST00000472815 ZBTB3Q9H5J0 574 aa18.12■□□□□ 0.49
HIF3A-206ENST00000472815 CCDC87Q9NVE4 849 aa18.12■□□□□ 0.49
HIF3A-206ENST00000472815 CWC25Q9NXE8 425 aaPredicted RBP18.12■□□□□ 0.49
HIF3A-206ENST00000472815 COL15A1P39059 1388 aa18.12■□□□□ 0.49
HIF3A-206ENST00000472815 PNMA6EA0A0J9YXQ4 647 aa18.12■□□□□ 0.49
HIF3A-206ENST00000472815 KCNQ2O43526 872 aa18.12■□□□□ 0.49
HIF3A-206ENST00000472815 RAB11FIP3O75154 756 aa18.12■□□□□ 0.49
HIF3A-206ENST00000472815 MAP3K15Q6ZN16 1313 aa18.12■□□□□ 0.49
HIF3A-206ENST00000472815 POLA2Q14181 598 aa18.11■□□□□ 0.49
HIF3A-206ENST00000472815 LRRCC1Q9C099 1032 aa18.11■□□□□ 0.49
HIF3A-206ENST00000472815 RREB1Q92766 1687 aa18.11■□□□□ 0.49
HIF3A-206ENST00000472815 COL5A3P25940 1745 aaPredicted RBP18.1■□□□□ 0.49
HIF3A-206ENST00000472815 A0A087WZG4 1122 aa18.1■□□□□ 0.49
HIF3A-206ENST00000472815 ARXQ96QS3 562 aa18.1■□□□□ 0.49
HIF3A-206ENST00000472815 ZBTB1Q9Y2K1 713 aa18.1■□□□□ 0.49
HIF3A-206ENST00000472815 ATP5J2-PTCD1G3V325 749 aa18.09■□□□□ 0.49
HIF3A-206ENST00000472815 TCIRG1Q13488 830 aa18.09■□□□□ 0.49
HIF3A-206ENST00000472815 ANKRD36CQ5JPF3 1778 aa18.09■□□□□ 0.49
HIF3A-206ENST00000472815 ERVV-1B6SEH8 477 aa18.09■□□□□ 0.49
HIF3A-206ENST00000472815 CRKLP46109 303 aaKnown RBP18.09■□□□□ 0.49
HIF3A-206ENST00000472815 TRIM28Q13263 835 aaKnown RBP18.09■□□□□ 0.49
HIF3A-206ENST00000472815 GIGYF2Q6Y7W6 1299 aaKnown RBP18.09■□□□□ 0.49
HIF3A-206ENST00000472815 SUCLG2Q96I99 432 aa18.08■□□□□ 0.48
HIF3A-206ENST00000472815 EXOC6BQ9Y2D4 811 aa18.08■□□□□ 0.48
HIF3A-206ENST00000472815 SURF6O75683 361 aaKnown RBP18.07■□□□□ 0.48
HIF3A-206ENST00000472815 UBE3BQ7Z3V4 1068 aa18.07■□□□□ 0.48
HIF3A-206ENST00000472815 DZIP3Q86Y13 1208 aaKnown RBP18.07■□□□□ 0.48
HIF3A-206ENST00000472815 ERC1Q8IUD2 1116 aa18.07■□□□□ 0.48
HIF3A-206ENST00000472815 BICC1Q9H694 974 aaKnown RBP18.07■□□□□ 0.48
HIF3A-206ENST00000472815 TNS1Q9HBL0 1735 aaKnown RBP18.07■□□□□ 0.48
HIF3A-206ENST00000472815 APBB1O00213 710 aa18.06■□□□□ 0.48
HIF3A-206ENST00000472815 HMGB2P26583 209 aaKnown RBP18.06■□□□□ 0.48
HIF3A-206ENST00000472815 C8orf34Q49A92 452 aa18.06■□□□□ 0.48
HIF3A-206ENST00000472815 ISCA1Q9BUE6 129 aa18.06■□□□□ 0.48
HIF3A-206ENST00000472815 NUP98P52948 1817 aa18.06■□□□□ 0.48
HIF3A-206ENST00000472815 EIF5P55010 431 aaKnown RBP18.06■□□□□ 0.48
HIF3A-206ENST00000472815 ITPK1Q13572 414 aa18.06■□□□□ 0.48
HIF3A-206ENST00000472815 KIF1BPQ96EK5 621 aa18.06■□□□□ 0.48
HIF3A-206ENST00000472815 BCL11BQ9C0K0 894 aaPredicted RBP18.06■□□□□ 0.48
HIF3A-206ENST00000472815 H7C1W4 665 aa18.05■□□□□ 0.48
HIF3A-206ENST00000472815 OS9Q13438 667 aaPredicted RBP18.05■□□□□ 0.48
HIF3A-206ENST00000472815 BMP2KLQ5H9B9 411 aa18.05■□□□□ 0.48
HIF3A-206ENST00000472815 INTS5Q6P9B9 1019 aaKnown RBP18.05■□□□□ 0.48
HIF3A-206ENST00000472815 NOP58Q9Y2X3 529 aaKnown RBP18.05■□□□□ 0.48
HIF3A-206ENST00000472815 LY75O60449 1722 aa18.04■□□□□ 0.48
HIF3A-206ENST00000472815 CNTNAP4Q9C0A0 1308 aa18.04■□□□□ 0.48
HIF3A-206ENST00000472815 MYH14Q7Z406 1995 aaKnown RBP18.04■□□□□ 0.48
HIF3A-206ENST00000472815 EIF5BO60841 1220 aaKnown RBP18.03■□□□□ 0.48
HIF3A-206ENST00000472815 TRIM37O94972 964 aa18.03■□□□□ 0.48
HIF3A-206ENST00000472815 RABL6Q3YEC7 729 aaPredicted RBP18.03■□□□□ 0.48
HIF3A-206ENST00000472815 RC3H1Q5TC82 1133 aaKnown RBP18.03■□□□□ 0.48
HIF3A-206ENST00000472815 PLEKHM2Q8IWE5 1019 aa18.03■□□□□ 0.48
HIF3A-206ENST00000472815 KAZALD1Q96I82 304 aa18.03■□□□□ 0.48
HIF3A-206ENST00000472815 ZNF652Q9Y2D9 606 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms