RNA–Protein interactions for RNA: ENST00000472637.5

NEPRO-211, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 1 (best)

Gene NEPRO, Length 2,179 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-211ENST00000472637 SHANK3Q9BYB0 1731 aa17.6■□□□□ 0.41
NEPRO-211ENST00000472637 MCM4P33991 863 aa17.6■□□□□ 0.41
NEPRO-211ENST00000472637 GCKRQ14397 625 aa17.6■□□□□ 0.41
NEPRO-211ENST00000472637 HSP90AB4PQ58FF6 505 aa17.6■□□□□ 0.41
NEPRO-211ENST00000472637 CARD10Q9BWT7 1032 aa17.6■□□□□ 0.41
NEPRO-211ENST00000472637 NHSL1Q5SYE7 1610 aa17.59■□□□□ 0.41
NEPRO-211ENST00000472637 OS9Q13438 667 aaPredicted RBP17.59■□□□□ 0.41
NEPRO-211ENST00000472637 IL2RBP14784 551 aa17.59■□□□□ 0.41
NEPRO-211ENST00000472637 EPHA10Q5JZY3 1008 aa17.59■□□□□ 0.41
NEPRO-211ENST00000472637 JARID2Q92833 1246 aaPredicted RBP17.58■□□□□ 0.4
NEPRO-211ENST00000472637 PALD1Q9ULE6 856 aa17.58■□□□□ 0.4
NEPRO-211ENST00000472637 USP42Q9H9J4 1324 aaKnown RBP17.58■□□□□ 0.4
NEPRO-211ENST00000472637 NBPF26B4DH59 902 aa17.57■□□□□ 0.4
NEPRO-211ENST00000472637 SASH1O94885 1247 aa17.57■□□□□ 0.4
NEPRO-211ENST00000472637 NEXNQ0ZGT2 675 aa17.57■□□□□ 0.4
NEPRO-211ENST00000472637 NKX1-1Q15270 411 aaPredicted RBP17.57■□□□□ 0.4
NEPRO-211ENST00000472637 NBPF14Q5TI25 921 aa17.57■□□□□ 0.4
NEPRO-211ENST00000472637 NBPF10Q6P3W6 841 aaKnown RBP17.57■□□□□ 0.4
NEPRO-211ENST00000472637 NBPF15Q8N660 670 aa17.57■□□□□ 0.4
NEPRO-211ENST00000472637 DDX54Q8TDD1 881 aaKnown RBP17.57■□□□□ 0.4
NEPRO-211ENST00000472637 HSP90AA1P07900 732 aaKnown RBP17.57■□□□□ 0.4
NEPRO-211ENST00000472637 HDAC5Q9UQL6 1122 aa17.57■□□□□ 0.4
NEPRO-211ENST00000472637 LAMB4A4D0S4 1761 aa17.57■□□□□ 0.4
NEPRO-211ENST00000472637 UBR2Q8IWV8 1755 aa17.56■□□□□ 0.4
NEPRO-211ENST00000472637 ARFGEF2Q9Y6D5 1785 aa17.56■□□□□ 0.4
NEPRO-211ENST00000472637 ERVV-2B6SEH9 535 aa17.56■□□□□ 0.4
NEPRO-211ENST00000472637 KLHDC4Q8TBB5 520 aa17.56■□□□□ 0.4
NEPRO-211ENST00000472637 TNPO1Q92973 898 aaKnown RBP17.56■□□□□ 0.4
NEPRO-211ENST00000472637 ANO2Q9NQ90 1003 aa17.56■□□□□ 0.4
NEPRO-211ENST00000472637 CIZ1Q9ULV3 898 aaPredicted RBP17.56■□□□□ 0.4
NEPRO-211ENST00000472637 CLASRPQ8N2M8 674 aaKnown RBP17.56■□□□□ 0.4
NEPRO-211ENST00000472637 AFDNP55196 1824 aaKnown RBP17.55■□□□□ 0.4
NEPRO-211ENST00000472637 EVA1CP58658 441 aa17.55■□□□□ 0.4
NEPRO-211ENST00000472637 RAB3GAP1Q15042 981 aa17.55■□□□□ 0.4
NEPRO-211ENST00000472637 KCPQ6ZWJ8 1503 aa17.55■□□□□ 0.4
NEPRO-211ENST00000472637 ATP5J2-PTCD1G3V325 749 aa17.55■□□□□ 0.4
NEPRO-211ENST00000472637 PTCD1O75127 700 aaKnown RBP17.55■□□□□ 0.4
NEPRO-211ENST00000472637 SIL1Q9H173 461 aa17.54■□□□□ 0.4
NEPRO-211ENST00000472637 TTC41PQ6P2S7 1318 aa17.54■□□□□ 0.4
NEPRO-211ENST00000472637 ERC1Q8IUD2 1116 aa17.53■□□□□ 0.4
NEPRO-211ENST00000472637 EAF2Q96CJ1 260 aaPredicted RBP17.53■□□□□ 0.4
NEPRO-211ENST00000472637 PAPPAQ13219 1627 aa17.53■□□□□ 0.4
NEPRO-211ENST00000472637 ST18O60284 1047 aa17.53■□□□□ 0.4
NEPRO-211ENST00000472637 TOGARAM1Q9Y4F4 1720 aa17.52■□□□□ 0.4
NEPRO-211ENST00000472637 GLRX3O76003 335 aaKnown RBP17.52■□□□□ 0.4
NEPRO-211ENST00000472637 A1BGP04217 495 aa17.52■□□□□ 0.4
NEPRO-211ENST00000472637 TTLL7Q6ZT98 887 aa17.52■□□□□ 0.4
NEPRO-211ENST00000472637 AACSQ86V21 672 aa17.52■□□□□ 0.4
NEPRO-211ENST00000472637 CNTROBQ8N137 903 aa17.52■□□□□ 0.4
NEPRO-211ENST00000472637 PLBD2Q8NHP8 589 aa17.52■□□□□ 0.4
NEPRO-211ENST00000472637 ECHDC1Q9NTX5 307 aa17.52■□□□□ 0.4
NEPRO-211ENST00000472637 SGSM2O43147 1006 aa17.52■□□□□ 0.39
NEPRO-211ENST00000472637 G3BP1Q13283 466 aaKnown RBP eCLIP17.52■□□□□ 0.39
NEPRO-211ENST00000472637 UBE3BQ7Z3V4 1068 aa17.52■□□□□ 0.39
NEPRO-211ENST00000472637 IFIT2P09913 472 aaKnown RBP17.51■□□□□ 0.39
NEPRO-211ENST00000472637 NEK4P51957 841 aa17.51■□□□□ 0.39
NEPRO-211ENST00000472637 CASP7P55210 303 aa17.51■□□□□ 0.39
NEPRO-211ENST00000472637 BTG4Q9NY30 223 aa17.51■□□□□ 0.39
NEPRO-211ENST00000472637 TLR7Q9NYK1 1049 aaKnown RBP17.51■□□□□ 0.39
NEPRO-211ENST00000472637 SSFA2P28290 1259 aa17.5■□□□□ 0.39
NEPRO-211ENST00000472637 CCDC8Q9H0W5 538 aaPredicted RBP17.5■□□□□ 0.39
NEPRO-211ENST00000472637 A0A087WZG4 1122 aa17.5■□□□□ 0.39
NEPRO-211ENST00000472637 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
NEPRO-211ENST00000472637 ZGPATQ8N5A5 531 aaKnown RBP17.5■□□□□ 0.39
NEPRO-211ENST00000472637 TNS2Q63HR2 1409 aa17.5■□□□□ 0.39
NEPRO-211ENST00000472637 ANAPC15P60006 121 aa17.49■□□□□ 0.39
NEPRO-211ENST00000472637 CWC27Q6UX04 472 aaKnown RBP17.49■□□□□ 0.39
NEPRO-211ENST00000472637 IL17RAQ96F46 866 aa17.49■□□□□ 0.39
NEPRO-211ENST00000472637 ERBB4Q15303 1308 aa17.49■□□□□ 0.39
NEPRO-211ENST00000472637 RABL6Q3YEC7 729 aaPredicted RBP17.49■□□□□ 0.39
NEPRO-211ENST00000472637 LSG1Q9H089 658 aaKnown RBP17.49■□□□□ 0.39
NEPRO-211ENST00000472637 NUP188Q5SRE5 1749 aa17.48■□□□□ 0.39
NEPRO-211ENST00000472637 MCCP23508 829 aa17.48■□□□□ 0.39
NEPRO-211ENST00000472637 HSPA4P34932 840 aa17.48■□□□□ 0.39
NEPRO-211ENST00000472637 PTPN12Q05209 780 aaKnown RBP17.48■□□□□ 0.39
NEPRO-211ENST00000472637 TRAK2O60296 914 aa17.47■□□□□ 0.39
NEPRO-211ENST00000472637 PKP1Q13835 747 aa17.47■□□□□ 0.39
NEPRO-211ENST00000472637 COPRSQ9NQ92 184 aa17.47■□□□□ 0.39
NEPRO-211ENST00000472637 COL15A1P39059 1388 aa17.47■□□□□ 0.39
NEPRO-211ENST00000472637 RAD50Q92878 1312 aa17.47■□□□□ 0.39
NEPRO-211ENST00000472637 UPF3BQ9BZI7 483 aaKnown RBP17.47■□□□□ 0.39
NEPRO-211ENST00000472637 GPATCH3Q96I76 525 aa17.46■□□□□ 0.39
NEPRO-211ENST00000472637 TMX3Q96JJ7 454 aa17.46■□□□□ 0.39
NEPRO-211ENST00000472637 H7C1W4 665 aa17.46■□□□□ 0.39
NEPRO-211ENST00000472637 EPB41L2O43491 1005 aaKnown RBP17.46■□□□□ 0.39
NEPRO-211ENST00000472637 ZBTB3Q9H5J0 574 aa17.46■□□□□ 0.39
NEPRO-211ENST00000472637 ASAP1Q9ULH1 1129 aa17.46■□□□□ 0.39
NEPRO-211ENST00000472637 DDX11L8A8MPP1 907 aa17.45■□□□□ 0.38
NEPRO-211ENST00000472637 CYP2E1P05181 493 aaPredicted RBP17.45■□□□□ 0.38
NEPRO-211ENST00000472637 FOXO4P98177 505 aa17.45■□□□□ 0.38
NEPRO-211ENST00000472637 PIGBQ92521 554 aa17.45■□□□□ 0.38
NEPRO-211ENST00000472637 TMOD3Q9NYL9 352 aa17.45■□□□□ 0.38
NEPRO-211ENST00000472637 RASEFQ8IZ41 740 aa17.45■□□□□ 0.38
NEPRO-211ENST00000472637 GZF1Q9H116 711 aaPredicted RBP17.45■□□□□ 0.38
NEPRO-211ENST00000472637 TJP1Q07157 1748 aa17.44■□□□□ 0.38
NEPRO-211ENST00000472637 KAT6BQ8WYB5 2073 aa17.44■□□□□ 0.38
NEPRO-211ENST00000472637 LMBR1LQ6UX01 489 aa17.44■□□□□ 0.38
NEPRO-211ENST00000472637 EVI5LQ96CN4 794 aa17.44■□□□□ 0.38
NEPRO-211ENST00000472637 BOLA2Q9H3K6 86 aa17.44■□□□□ 0.38
NEPRO-211ENST00000472637 ROBO1Q9Y6N7 1651 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms