RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 DEFB115Q30KQ5 88 aa18.91■□□□□ 0.62
SMURF1-203ENST00000472627 RASSF10A6NK89 507 aa18.9■□□□□ 0.62
SMURF1-203ENST00000472627 CCDC24Q8N4L8 307 aa18.9■□□□□ 0.62
SMURF1-203ENST00000472627 ABT1Q9ULW3 272 aaKnown RBP18.9■□□□□ 0.62
SMURF1-203ENST00000472627 TBC1D2BQ9UPU7 963 aa18.9■□□□□ 0.62
SMURF1-203ENST00000472627 KNSTRNQ9Y448 316 aa18.9■□□□□ 0.62
SMURF1-203ENST00000472627 ITGBL1O95965 494 aaPredicted RBP18.89■□□□□ 0.61
SMURF1-203ENST00000472627 HSPA8P11142 646 aaKnown RBP18.89■□□□□ 0.61
SMURF1-203ENST00000472627 EPHX2P34913 555 aa18.89■□□□□ 0.61
SMURF1-203ENST00000472627 TEFQ10587 303 aa18.89■□□□□ 0.61
SMURF1-203ENST00000472627 PCDH10Q9P2E7 1040 aa18.89■□□□□ 0.61
SMURF1-203ENST00000472627 UBR2Q8IWV8 1755 aa18.88■□□□□ 0.61
SMURF1-203ENST00000472627 HMOX1P09601 288 aa18.88■□□□□ 0.61
SMURF1-203ENST00000472627 FKBP4Q02790 459 aaKnown RBP eCLIP18.88■□□□□ 0.61
SMURF1-203ENST00000472627 MLLT1Q03111 559 aaPredicted RBP18.88■□□□□ 0.61
SMURF1-203ENST00000472627 RTKN2Q8IZC4 609 aa18.88■□□□□ 0.61
SMURF1-203ENST00000472627 MTHFSDQ2M296 383 aaKnown RBP18.87■□□□□ 0.61
SMURF1-203ENST00000472627 CNTROBQ8N137 903 aa18.87■□□□□ 0.61
SMURF1-203ENST00000472627 WDR33Q9C0J8 1336 aaKnown RBP18.87■□□□□ 0.61
SMURF1-203ENST00000472627 HEG1Q9ULI3 1381 aa18.87■□□□□ 0.61
SMURF1-203ENST00000472627 ZNF652Q9Y2D9 606 aa18.87■□□□□ 0.61
SMURF1-203ENST00000472627 ARFGEF2Q9Y6D5 1785 aa18.87■□□□□ 0.61
SMURF1-203ENST00000472627 VIRMAQ69YN4 1812 aaKnown RBP18.86■□□□□ 0.61
SMURF1-203ENST00000472627 NPR1P16066 1061 aa18.86■□□□□ 0.61
SMURF1-203ENST00000472627 ECE1P42892 770 aa18.86■□□□□ 0.61
SMURF1-203ENST00000472627 NBPF5PQ86XG9 351 aaPredicted RBP18.86■□□□□ 0.61
SMURF1-203ENST00000472627 FMNL2Q96PY5 1086 aa18.86■□□□□ 0.61
SMURF1-203ENST00000472627 SLX4Q8IY92 1834 aa18.86■□□□□ 0.61
SMURF1-203ENST00000472627 CCDC85CA6NKD9 419 aa18.85■□□□□ 0.61
SMURF1-203ENST00000472627 ZNF790Q6PG37 636 aa18.85■□□□□ 0.61
SMURF1-203ENST00000472627 ZNF496Q96IT1 587 aaPredicted RBP18.85■□□□□ 0.61
SMURF1-203ENST00000472627 ZNF541Q9H0D2 1346 aa18.84■□□□□ 0.61
SMURF1-203ENST00000472627 CAMTA2O94983 1202 aa18.84■□□□□ 0.61
SMURF1-203ENST00000472627 EIF4G2P78344 907 aaKnown RBP eCLIP18.84■□□□□ 0.61
SMURF1-203ENST00000472627 MAP1SQ66K74 1059 aaPredicted RBP18.84■□□□□ 0.61
SMURF1-203ENST00000472627 PAXIP1Q6ZW49 1069 aaPredicted RBP18.84■□□□□ 0.61
SMURF1-203ENST00000472627 DZIP3Q86Y13 1208 aaKnown RBP18.84■□□□□ 0.61
SMURF1-203ENST00000472627 GPC2Q8N158 579 aa18.84■□□□□ 0.61
SMURF1-203ENST00000472627 ZNF277Q9NRM2 450 aaPredicted RBP18.84■□□□□ 0.61
SMURF1-203ENST00000472627 CACNA1SQ13698 1873 aa18.84■□□□□ 0.61
SMURF1-203ENST00000472627 RNF123Q5XPI4 1314 aa18.83■□□□□ 0.61
SMURF1-203ENST00000472627 LMOD1P29536 600 aaPredicted RBP18.83■□□□□ 0.6
SMURF1-203ENST00000472627 JDP2Q8WYK2 163 aa18.83■□□□□ 0.6
SMURF1-203ENST00000472627 DIAPH1O60610 1272 aaKnown RBP18.82■□□□□ 0.6
SMURF1-203ENST00000472627 CLEC4GQ6UXB4 293 aa18.82■□□□□ 0.6
SMURF1-203ENST00000472627 TPTE2Q6XPS3 522 aa18.82■□□□□ 0.6
SMURF1-203ENST00000472627 GAS2L2Q8NHY3 880 aa18.82■□□□□ 0.6
SMURF1-203ENST00000472627 C7orf43Q8WVR3 580 aa18.82■□□□□ 0.6
SMURF1-203ENST00000472627 GNAT3A8MTJ3 354 aa18.81■□□□□ 0.6
SMURF1-203ENST00000472627 ALDH1B1P30837 517 aa18.81■□□□□ 0.6
SMURF1-203ENST00000472627 IARSP41252 1262 aaKnown RBP18.81■□□□□ 0.6
SMURF1-203ENST00000472627 EIF6P56537 245 aaKnown RBP18.8■□□□□ 0.6
SMURF1-203ENST00000472627 DDX21Q9NR30 783 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMURF1-203ENST00000472627 ADAMTSL1Q8N6G6 1762 aa18.8■□□□□ 0.6
SMURF1-203ENST00000472627 FZD9O00144 591 aa18.79■□□□□ 0.6
SMURF1-203ENST00000472627 A1BGP04217 495 aa18.79■□□□□ 0.6
SMURF1-203ENST00000472627 CAPNS2Q96L46 248 aa18.79■□□□□ 0.6
SMURF1-203ENST00000472627 GTF2E1P29083 439 aaPredicted RBP18.78■□□□□ 0.6
SMURF1-203ENST00000472627 RGS19P49795 217 aa18.78■□□□□ 0.6
SMURF1-203ENST00000472627 CFAP44Q96MT7 982 aa18.78■□□□□ 0.6
SMURF1-203ENST00000472627 GPR101Q96P66 508 aaPredicted RBP18.78■□□□□ 0.6
SMURF1-203ENST00000472627 RGL2O15211 777 aa18.77■□□□□ 0.6
SMURF1-203ENST00000472627 CA12O43570 354 aa18.77■□□□□ 0.6
SMURF1-203ENST00000472627 GRM1Q13255 1194 aa18.77■□□□□ 0.6
SMURF1-203ENST00000472627 CC2D2BQ6DHV5 1058 aa18.77■□□□□ 0.6
SMURF1-203ENST00000472627 SYNE4Q8N205 404 aa18.77■□□□□ 0.6
SMURF1-203ENST00000472627 BCORQ6W2J9 1755 aa18.77■□□□□ 0.6
SMURF1-203ENST00000472627 KLRG2A4D1S0 409 aaPredicted RBP18.76■□□□□ 0.59
SMURF1-203ENST00000472627 GRIPAP1Q4V328 841 aa18.76■□□□□ 0.59
SMURF1-203ENST00000472627 PSMD1Q99460 953 aa18.76■□□□□ 0.59
SMURF1-203ENST00000472627 NIP7Q9Y221 180 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMURF1-203ENST00000472627 GJA3Q9Y6H8 435 aa18.76■□□□□ 0.59
SMURF1-203ENST00000472627 THSD7BQ9C0I4 1608 aa18.75■□□□□ 0.59
SMURF1-203ENST00000472627 BTBD11A6QL63 1104 aa18.75■□□□□ 0.59
SMURF1-203ENST00000472627 HSPA5P11021 654 aaKnown RBP18.75■□□□□ 0.59
SMURF1-203ENST00000472627 MAP2K2P36507 400 aa18.75■□□□□ 0.59
SMURF1-203ENST00000472627 AMER1Q5JTC6 1135 aaPredicted RBP18.74■□□□□ 0.59
SMURF1-203ENST00000472627 USP50Q70EL3 339 aaPredicted RBP18.74■□□□□ 0.59
SMURF1-203ENST00000472627 IL17REQ8NFR9 667 aa18.74■□□□□ 0.59
SMURF1-203ENST00000472627 U2SURPO15042 1029 aaKnown RBP18.73■□□□□ 0.59
SMURF1-203ENST00000472627 CYP4F22Q6NT55 531 aa18.73■□□□□ 0.59
SMURF1-203ENST00000472627 SNRPA1P09661 255 aaKnown RBP18.71■□□□□ 0.59
SMURF1-203ENST00000472627 OLFM4Q6UX06 510 aa18.71■□□□□ 0.59
SMURF1-203ENST00000472627 LARGE2Q8N3Y3 721 aa18.71■□□□□ 0.59
SMURF1-203ENST00000472627 NYXQ9GZU5 481 aa18.71■□□□□ 0.59
SMURF1-203ENST00000472627 TMX4Q9H1E5 349 aaPredicted RBP18.71■□□□□ 0.59
SMURF1-203ENST00000472627 TLL2Q9Y6L7 1015 aa18.71■□□□□ 0.59
SMURF1-203ENST00000472627 CLSPNQ9HAW4 1339 aa18.71■□□□□ 0.59
SMURF1-203ENST00000472627 SIPA1L3O60292 1781 aaPredicted RBP18.7■□□□□ 0.58
SMURF1-203ENST00000472627 FAM177BA6PVY3 158 aa18.7■□□□□ 0.58
SMURF1-203ENST00000472627 RPGRQ92834 1020 aaKnown RBP18.7■□□□□ 0.58
SMURF1-203ENST00000472627 CEMIPQ8WUJ3 1361 aa18.69■□□□□ 0.58
SMURF1-203ENST00000472627 USP16Q9Y5T5 823 aa18.69■□□□□ 0.58
SMURF1-203ENST00000472627 PIP4K2AP48426 406 aaPredicted RBP18.68■□□□□ 0.58
SMURF1-203ENST00000472627 SCNN1DP51172 638 aa18.68■□□□□ 0.58
SMURF1-203ENST00000472627 NIM1KQ8IY84 436 aa18.68■□□□□ 0.58
SMURF1-203ENST00000472627 RTF1Q92541 710 aaKnown RBP18.68■□□□□ 0.58
SMURF1-203ENST00000472627 MCOLN1Q9GZU1 580 aa18.68■□□□□ 0.58
SMURF1-203ENST00000472627 BRPF1P55201 1214 aaPredicted RBP18.67■□□□□ 0.58
SMURF1-203ENST00000472627 HHIPL1Q96JK4 782 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms