RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SCN7AQ01118 1682 aa25.82■■□□□ 1.72
SORT1-203ENST00000471996 SLX4Q8IY92 1834 aa25.81■■□□□ 1.72
SORT1-203ENST00000471996 ABHD8Q96I13 439 aa25.81■■□□□ 1.72
SORT1-203ENST00000471996 SCN4AP35499 1836 aa25.8■■□□□ 1.72
SORT1-203ENST00000471996 RASSF10A6NK89 507 aa25.8■■□□□ 1.72
SORT1-203ENST00000471996 HSPA8P11142 646 aaKnown RBP25.8■■□□□ 1.72
SORT1-203ENST00000471996 CCDC93Q567U6 631 aa25.8■■□□□ 1.72
SORT1-203ENST00000471996 ZNF790Q6PG37 636 aa25.8■■□□□ 1.72
SORT1-203ENST00000471996 HACL1Q9UJ83 578 aa25.8■■□□□ 1.72
SORT1-203ENST00000471996 CLEC11AQ9Y240 323 aa25.8■■□□□ 1.72
SORT1-203ENST00000471996 EIF4G2P78344 907 aaKnown RBP eCLIP25.79■■□□□ 1.72
SORT1-203ENST00000471996 DEFB115Q30KQ5 88 aa25.79■■□□□ 1.72
SORT1-203ENST00000471996 NPM2Q86SE8 214 aaKnown RBP25.79■■□□□ 1.72
SORT1-203ENST00000471996 EPHX2P34913 555 aa25.78■■□□□ 1.72
SORT1-203ENST00000471996 FAM161AQ3B820 660 aa25.78■■□□□ 1.72
SORT1-203ENST00000471996 ZNF541Q9H0D2 1346 aa25.78■■□□□ 1.72
SORT1-203ENST00000471996 A1BGP04217 495 aa25.77■■□□□ 1.72
SORT1-203ENST00000471996 HSPA5P11021 654 aaKnown RBP25.77■■□□□ 1.72
SORT1-203ENST00000471996 FKBP4Q02790 459 aaKnown RBP eCLIP25.77■■□□□ 1.72
SORT1-203ENST00000471996 MAP2K1Q02750 393 aaPredicted RBP25.76■■□□□ 1.71
SORT1-203ENST00000471996 TEFQ10587 303 aa25.76■■□□□ 1.71
SORT1-203ENST00000471996 PNMA8AQ86V59 439 aaPredicted RBP25.76■■□□□ 1.71
SORT1-203ENST00000471996 CNTROBQ8N137 903 aa25.76■■□□□ 1.71
SORT1-203ENST00000471996 ZNF277Q9NRM2 450 aaPredicted RBP25.76■■□□□ 1.71
SORT1-203ENST00000471996 VIRMAQ69YN4 1812 aaKnown RBP25.76■■□□□ 1.71
SORT1-203ENST00000471996 AMER1Q5JTC6 1135 aaPredicted RBP25.75■■□□□ 1.71
SORT1-203ENST00000471996 IL17REQ8NFR9 667 aa25.75■■□□□ 1.71
SORT1-203ENST00000471996 WDR33Q9C0J8 1336 aaKnown RBP25.74■■□□□ 1.71
SORT1-203ENST00000471996 DIAPH1O60610 1272 aaKnown RBP25.74■■□□□ 1.71
SORT1-203ENST00000471996 NPR1P16066 1061 aa25.74■■□□□ 1.71
SORT1-203ENST00000471996 MAP1SQ66K74 1059 aaPredicted RBP25.74■■□□□ 1.71
SORT1-203ENST00000471996 DZIP3Q86Y13 1208 aaKnown RBP25.74■■□□□ 1.71
SORT1-203ENST00000471996 FMNL2Q96PY5 1086 aa25.74■■□□□ 1.71
SORT1-203ENST00000471996 NBPF5PQ86XG9 351 aaPredicted RBP25.73■■□□□ 1.71
SORT1-203ENST00000471996 ARFGEF2Q9Y6D5 1785 aa25.73■■□□□ 1.71
SORT1-203ENST00000471996 ADAMTSL1Q8N6G6 1762 aa25.72■■□□□ 1.71
SORT1-203ENST00000471996 RNF123Q5XPI4 1314 aa25.72■■□□□ 1.71
SORT1-203ENST00000471996 KLRG2A4D1S0 409 aaPredicted RBP25.72■■□□□ 1.71
SORT1-203ENST00000471996 RTKN2Q8IZC4 609 aa25.72■■□□□ 1.71
SORT1-203ENST00000471996 GNAT3A8MTJ3 354 aa25.71■■□□□ 1.71
SORT1-203ENST00000471996 FZD9O00144 591 aa25.71■■□□□ 1.71
SORT1-203ENST00000471996 CLEC4GQ6UXB4 293 aa25.71■■□□□ 1.71
SORT1-203ENST00000471996 ABT1Q9ULW3 272 aaKnown RBP25.71■■□□□ 1.71
SORT1-203ENST00000471996 OLFM4Q6UX06 510 aa25.7■■□□□ 1.7
SORT1-203ENST00000471996 CACNA1SQ13698 1873 aa25.69■■□□□ 1.7
SORT1-203ENST00000471996 IARSP41252 1262 aaKnown RBP25.69■■□□□ 1.7
SORT1-203ENST00000471996 GPC2Q8N158 579 aa25.68■■□□□ 1.7
SORT1-203ENST00000471996 GAS2L2Q8NHY3 880 aa25.68■■□□□ 1.7
SORT1-203ENST00000471996 DDX21Q9NR30 783 aaKnown RBP eCLIP25.68■■□□□ 1.7
SORT1-203ENST00000471996 SYNE4Q8N205 404 aa25.67■■□□□ 1.7
SORT1-203ENST00000471996 ZNF652Q9Y2D9 606 aa25.67■■□□□ 1.7
SORT1-203ENST00000471996 KCNQ3O43525 872 aa25.66■■□□□ 1.7
SORT1-203ENST00000471996 MLLT1Q03111 559 aaPredicted RBP25.66■■□□□ 1.7
SORT1-203ENST00000471996 TPTE2Q6XPS3 522 aa25.66■■□□□ 1.7
SORT1-203ENST00000471996 USP16Q9Y5T5 823 aa25.66■■□□□ 1.7
SORT1-203ENST00000471996 BCORQ6W2J9 1755 aa25.65■■□□□ 1.7
SORT1-203ENST00000471996 PIP4K2AP48426 406 aaPredicted RBP25.65■■□□□ 1.7
SORT1-203ENST00000471996 RGS19P49795 217 aa25.65■■□□□ 1.7
SORT1-203ENST00000471996 CCDC85CA6NKD9 419 aa25.64■■□□□ 1.7
SORT1-203ENST00000471996 ALDH1B1P30837 517 aa25.64■■□□□ 1.7
SORT1-203ENST00000471996 CEMIPQ8WUJ3 1361 aa25.64■■□□□ 1.69
SORT1-203ENST00000471996 BTBD11A6QL63 1104 aa25.63■■□□□ 1.69
SORT1-203ENST00000471996 CAPNS2Q96L46 248 aa25.63■■□□□ 1.69
SORT1-203ENST00000471996 BEGAINQ9BUH8 593 aa25.63■■□□□ 1.69
SORT1-203ENST00000471996 ECE1P42892 770 aa25.62■■□□□ 1.69
SORT1-203ENST00000471996 JDP2Q8WYK2 163 aa25.62■■□□□ 1.69
SORT1-203ENST00000471996 NIP7Q9Y221 180 aaKnown RBP eCLIP25.62■■□□□ 1.69
SORT1-203ENST00000471996 SIPA1L3O60292 1781 aaPredicted RBP25.61■■□□□ 1.69
SORT1-203ENST00000471996 RGL2O15211 777 aa25.61■■□□□ 1.69
SORT1-203ENST00000471996 GPR101Q96P66 508 aaPredicted RBP25.61■■□□□ 1.69
SORT1-203ENST00000471996 PSMD1Q99460 953 aa25.61■■□□□ 1.69
SORT1-203ENST00000471996 U2SURPO15042 1029 aaKnown RBP25.6■■□□□ 1.69
SORT1-203ENST00000471996 PRAMEF22A3QJZ6 481 aa25.59■■□□□ 1.69
SORT1-203ENST00000471996 LMOD1P29536 600 aaPredicted RBP25.59■■□□□ 1.69
SORT1-203ENST00000471996 EIF6P56537 245 aaKnown RBP25.59■■□□□ 1.69
SORT1-203ENST00000471996 FMR1Q06787 632 aaKnown RBP eCLIP25.59■■□□□ 1.69
SORT1-203ENST00000471996 CYP4F22Q6NT55 531 aa25.59■■□□□ 1.69
SORT1-203ENST00000471996 PAXIP1Q6ZW49 1069 aaPredicted RBP25.59■■□□□ 1.69
SORT1-203ENST00000471996 PCDH10Q9P2E7 1040 aa25.59■■□□□ 1.69
SORT1-203ENST00000471996 GJA3Q9Y6H8 435 aa25.59■■□□□ 1.69
SORT1-203ENST00000471996 SNED1Q8TER0 1413 aa25.59■■□□□ 1.69
SORT1-203ENST00000471996 CLSPNQ9HAW4 1339 aa25.59■■□□□ 1.69
SORT1-203ENST00000471996 THSD7BQ9C0I4 1608 aa25.59■■□□□ 1.69
SORT1-203ENST00000471996 FAM177BA6PVY3 158 aa25.58■■□□□ 1.69
SORT1-203ENST00000471996 SNRPA1P09661 255 aaKnown RBP25.57■■□□□ 1.68
SORT1-203ENST00000471996 COL3A1P02461 1466 aaPredicted RBP25.56■■□□□ 1.68
SORT1-203ENST00000471996 SCNN1DP51172 638 aa25.56■■□□□ 1.68
SORT1-203ENST00000471996 GRM1Q13255 1194 aa25.56■■□□□ 1.68
SORT1-203ENST00000471996 CC2D1BQ5T0F9 858 aaKnown RBP25.56■■□□□ 1.68
SORT1-203ENST00000471996 CST9Q5W186 159 aa25.56■■□□□ 1.68
SORT1-203ENST00000471996 CC2D2BQ6DHV5 1058 aa25.56■■□□□ 1.68
SORT1-203ENST00000471996 NBPF26B4DH59 902 aa25.55■■□□□ 1.68
SORT1-203ENST00000471996 PER1O15534 1290 aaPredicted RBP25.55■■□□□ 1.68
SORT1-203ENST00000471996 GTF2E1P29083 439 aaPredicted RBP25.55■■□□□ 1.68
SORT1-203ENST00000471996 EPS15P42566 896 aa25.55■■□□□ 1.68
SORT1-203ENST00000471996 NBPF10Q6P3W6 841 aaKnown RBP25.55■■□□□ 1.68
SORT1-203ENST00000471996 NBPF15Q8N660 670 aa25.55■■□□□ 1.68
SORT1-203ENST00000471996 TLL2Q9Y6L7 1015 aa25.55■■□□□ 1.68
SORT1-203ENST00000471996 MAP2K2P36507 400 aa25.54■■□□□ 1.68
SORT1-203ENST00000471996 TRIM26Q12899 539 aaPredicted RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms