RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 WWC1Q8IX03 1113 aa12.89□□□□□ -0.35
CHMP2B-203ENST00000471660 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
CHMP2B-203ENST00000471660 NOL10Q9BSC4 688 aaKnown RBP12.89□□□□□ -0.35
CHMP2B-203ENST00000471660 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
CHMP2B-203ENST00000471660 PYCARDQ9ULZ3 195 aa12.89□□□□□ -0.35
CHMP2B-203ENST00000471660 CPSF1Q10570 1443 aaKnown RBP12.89□□□□□ -0.35
CHMP2B-203ENST00000471660 AKAP12Q02952 1782 aa12.88□□□□□ -0.35
CHMP2B-203ENST00000471660 FAM83GA6ND36 823 aa12.88□□□□□ -0.35
CHMP2B-203ENST00000471660 CASQ1P31415 396 aa12.88□□□□□ -0.35
CHMP2B-203ENST00000471660 SRPK2P78362 688 aaKnown RBP12.88□□□□□ -0.35
CHMP2B-203ENST00000471660 PKP1Q13835 747 aa12.88□□□□□ -0.35
CHMP2B-203ENST00000471660 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
CHMP2B-203ENST00000471660 IL16Q14005 1332 aa12.88□□□□□ -0.35
CHMP2B-203ENST00000471660 AATKQ6ZMQ8 1374 aa12.88□□□□□ -0.35
CHMP2B-203ENST00000471660 APBA3O96018 575 aa12.88□□□□□ -0.35
CHMP2B-203ENST00000471660 COL3A1P02461 1466 aaPredicted RBP12.88□□□□□ -0.35
CHMP2B-203ENST00000471660 FAM98CQ17RN3 349 aaKnown RBP12.88□□□□□ -0.35
CHMP2B-203ENST00000471660 GRIPAP1Q4V328 841 aa12.88□□□□□ -0.35
CHMP2B-203ENST00000471660 KDM4AO75164 1064 aa12.87□□□□□ -0.35
CHMP2B-203ENST00000471660 KMT5BQ4FZB7 885 aa12.87□□□□□ -0.35
CHMP2B-203ENST00000471660 CEP83Q9Y592 693 aa12.87□□□□□ -0.35
CHMP2B-203ENST00000471660 TNS3Q68CZ2 1445 aa12.87□□□□□ -0.35
CHMP2B-203ENST00000471660 GOLGA6L6A8MZA4 724 aa12.87□□□□□ -0.35
CHMP2B-203ENST00000471660 TXLNBQ8N3L3 684 aa12.87□□□□□ -0.35
CHMP2B-203ENST00000471660 CDK19Q9BWU1 502 aa12.87□□□□□ -0.35
CHMP2B-203ENST00000471660 TNNQ9UQP3 1299 aa12.87□□□□□ -0.35
CHMP2B-203ENST00000471660 ITSN1Q15811 1721 aa12.86□□□□□ -0.35
CHMP2B-203ENST00000471660 CFAP44Q96MT7 982 aa12.86□□□□□ -0.35
CHMP2B-203ENST00000471660 CCDC172P0C7W6 258 aa12.85□□□□□ -0.35
CHMP2B-203ENST00000471660 TBC1D9Q6ZT07 1266 aa12.85□□□□□ -0.35
CHMP2B-203ENST00000471660 BANK1Q8NDB2 785 aa12.85□□□□□ -0.35
CHMP2B-203ENST00000471660 CCDC112Q8NEF3 446 aa12.85□□□□□ -0.35
CHMP2B-203ENST00000471660 DZIP1LQ8IYY4 767 aaKnown RBP12.85□□□□□ -0.35
CHMP2B-203ENST00000471660 CABP2Q9NPB3 220 aa12.85□□□□□ -0.35
CHMP2B-203ENST00000471660 ZNF446Q9NWS9 450 aa12.85□□□□□ -0.35
CHMP2B-203ENST00000471660 POLKQ9UBT6 870 aa12.85□□□□□ -0.35
CHMP2B-203ENST00000471660 TOPAZ1Q8N9V7 1692 aa12.84□□□□□ -0.35
CHMP2B-203ENST00000471660 WASLO00401 505 aaPredicted RBP12.84□□□□□ -0.35
CHMP2B-203ENST00000471660 TRIM37O94972 964 aa12.84□□□□□ -0.35
CHMP2B-203ENST00000471660 MTHFSP49914 203 aa12.84□□□□□ -0.35
CHMP2B-203ENST00000471660 CT47A1Q5JQC4 288 aaPredicted RBP12.84□□□□□ -0.35
CHMP2B-203ENST00000471660 RNF20Q5VTR2 975 aa12.84□□□□□ -0.35
CHMP2B-203ENST00000471660 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
CHMP2B-203ENST00000471660 NFATC2IPQ8NCF5 419 aa12.84□□□□□ -0.35
CHMP2B-203ENST00000471660 TRERF1Q96PN7 1200 aa12.84□□□□□ -0.35
CHMP2B-203ENST00000471660 ATG3Q9NT62 314 aa12.84□□□□□ -0.35
CHMP2B-203ENST00000471660 DDX19BQ9UMR2 479 aa12.84□□□□□ -0.35
CHMP2B-203ENST00000471660 FMN2Q9NZ56 1722 aa12.84□□□□□ -0.35
CHMP2B-203ENST00000471660 PRR29P0C7W0 189 aa12.84□□□□□ -0.35
CHMP2B-203ENST00000471660 PTGER2P43116 358 aa12.84□□□□□ -0.35
CHMP2B-203ENST00000471660 SPATA31A5Q5VU36 1347 aa12.83□□□□□ -0.36
CHMP2B-203ENST00000471660 SPATA31A7Q8IWB4 1347 aa12.83□□□□□ -0.36
CHMP2B-203ENST00000471660 MYO1CO00159 1063 aa12.83□□□□□ -0.36
CHMP2B-203ENST00000471660 BMS1Q14692 1282 aaKnown RBP12.83□□□□□ -0.36
CHMP2B-203ENST00000471660 HOMEZQ8IX15 550 aa12.83□□□□□ -0.36
CHMP2B-203ENST00000471660 SYT17Q9BSW7 474 aa12.83□□□□□ -0.36
CHMP2B-203ENST00000471660 CHD1LQ86WJ1 897 aa12.83□□□□□ -0.36
CHMP2B-203ENST00000471660 ROBO2Q9HCK4 1378 aa12.82□□□□□ -0.36
CHMP2B-203ENST00000471660 FYB1O15117 783 aa12.82□□□□□ -0.36
CHMP2B-203ENST00000471660 MPNDQ8N594 471 aa12.82□□□□□ -0.36
CHMP2B-203ENST00000471660 ZNF428Q96B54 188 aa12.82□□□□□ -0.36
CHMP2B-203ENST00000471660 ESCO1Q5FWF5 840 aa12.82□□□□□ -0.36
CHMP2B-203ENST00000471660 STK26Q9P289 416 aa12.82□□□□□ -0.36
CHMP2B-203ENST00000471660 SBNO1A3KN83 1393 aa12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 KIF1CO43896 1103 aaKnown RBP12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 BRD1O95696 1058 aa12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 TEX35Q5T0J7 233 aa12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 FBXO38Q6PIJ6 1188 aa12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 SYT10Q6XYQ8 523 aa12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 GOLGA6L1Q8N7Z2 621 aa12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 DONSONQ9NYP3 566 aa12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 MINK1Q8N4C8 1332 aaPredicted RBP12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 FCHSD2O94868 740 aa12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 HAP1P54257 671 aaPredicted RBP12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 SATB1Q01826 763 aa12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 CCDC183Q5T5S1 534 aa12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 ERO1AQ96HE7 468 aa12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 FHDC1Q9C0D6 1143 aaPredicted RBP12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 CWC15Q9P013 229 aaKnown RBP12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 CCDC61Q9Y6R9 512 aa12.81□□□□□ -0.36
CHMP2B-203ENST00000471660 CDC45O75419 566 aa12.8□□□□□ -0.36
CHMP2B-203ENST00000471660 TNNT1P13805 278 aa12.8□□□□□ -0.36
CHMP2B-203ENST00000471660 FAM182BQ5T319 152 aa12.8□□□□□ -0.36
CHMP2B-203ENST00000471660 EGFL6Q8IUX8 553 aa12.8□□□□□ -0.36
CHMP2B-203ENST00000471660 PTPRCP08575 1304 aa12.8□□□□□ -0.36
CHMP2B-203ENST00000471660 ST18O60284 1047 aa12.8□□□□□ -0.36
CHMP2B-203ENST00000471660 NAA30Q147X3 362 aaPredicted RBP12.8□□□□□ -0.36
CHMP2B-203ENST00000471660 TMEM87AQ8NBN3 555 aa12.8□□□□□ -0.36
CHMP2B-203ENST00000471660 ST7Q9NRC1 585 aa12.8□□□□□ -0.36
CHMP2B-203ENST00000471660 JRKLQ9Y4A0 524 aa12.8□□□□□ -0.36
CHMP2B-203ENST00000471660 FOXO3O43524 673 aa12.79□□□□□ -0.36
CHMP2B-203ENST00000471660 PPIP5K1Q6PFW1 1433 aa12.79□□□□□ -0.36
CHMP2B-203ENST00000471660 ZGPATQ8N5A5 531 aaKnown RBP12.79□□□□□ -0.36
CHMP2B-203ENST00000471660 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.79□□□□□ -0.36
CHMP2B-203ENST00000471660 A0A1B0GUL7 405 aa12.79□□□□□ -0.36
CHMP2B-203ENST00000471660 TCP11L2Q8N4U5 519 aa12.79□□□□□ -0.36
CHMP2B-203ENST00000471660 ZBTB40Q9NUA8 1239 aa12.79□□□□□ -0.36
CHMP2B-203ENST00000471660 ANKARQ7Z5J8 1434 aa12.78□□□□□ -0.36
CHMP2B-203ENST00000471660 PLEKHG3A1L390 1219 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms