RNA–Protein interactions for RNA: ENST00000471001.1

NIPSNAP3A-202, Transcript of nipsnap homolog 3A, humanhuman

TSL 2

Gene NIPSNAP3A, Length 1,148 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-202ENST00000471001 ELOA3DA6NLF2 546 aaPredicted RBP11.02□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 SFSWAPQ12872 951 aaKnown RBP11.02□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 ELOA3BQ3SY89 546 aa11.02□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 ELOA3Q8NG57 546 aa11.02□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 SLC30A3Q99726 388 aa11.02□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 POM121CA8CG34 1229 aa11.01□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 ZBTB7BO15156 539 aaPredicted RBP11.01□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 LZTS3O60299 673 aaPredicted RBP11.01□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 COL9A3Q14050 684 aaPredicted RBP11.01□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 DOC2BQ14184 412 aa11.01□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 STARD13Q9Y3M8 1113 aa11□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 CLDN10P78369 228 aa10.99□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 UCN2Q96RP3 112 aa10.99□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 ZNF232Q9UNY5 417 aa10.99□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 SIN3BO75182 1162 aa10.98□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 TPCN2Q8NHX9 752 aa10.98□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 SERTM1A2A2V5 107 aa10.97□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 ADARB2-AS1A8MUL3 147 aa10.97□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 SPATA31C1P0DKV0 1188 aa10.97□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 TSPAN10Q9H1Z9 355 aaPredicted RBP10.97□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 POTEAQ6S8J7 498 aa10.96□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 C8orf86Q6ZUL3 223 aa10.96□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 RAB44Q7Z6P3 723 aaPredicted RBP10.96□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 HSH2DQ96JZ2 352 aa10.96□□□□□ -0.65
NIPSNAP3A-202ENST00000471001 USP17L3A6NCW0 530 aa10.95□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 USP17L4A6NCW7 530 aa10.95□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 FAM229AH3BQW9 127 aa10.95□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 USP17L2Q6R6M4 530 aa10.95□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 USP17L1Q7RTZ2 530 aa10.95□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 PLEKHM2Q8IWE5 1019 aa10.95□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 RHPN1Q8TCX5 695 aa10.95□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 SEMA6BQ9H3T3 888 aa10.95□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 GPC6Q9Y625 555 aaPredicted RBP10.95□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 M0R082 166 aa10.94□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 ALBP02768 609 aa10.94□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 CCDC102BQ68D86 513 aa10.94□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 ZNF280CQ8ND82 737 aa10.94□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 ZNF417Q8TAU3 575 aa10.94□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 TNFRSF25Q93038 417 aa10.94□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 ZNF587Q96SQ5 575 aaPredicted RBP10.94□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 GATA4P43694 442 aa10.93□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 SPEM2Q0P670 501 aa10.93□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 HCN4Q9Y3Q4 1203 aa10.93□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 DKK1O94907 266 aa10.92□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 ALAS2P22557 587 aa10.92□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 HIRAP54198 1017 aaPredicted RBP10.92□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 TRIM50Q86XT4 487 aa10.92□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 PSMA6P60900 246 aaKnown RBP10.91□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 RSPO4Q2I0M5 234 aaPredicted RBP10.91□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 MICALL1Q8N3F8 863 aa10.91□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 PHACTR1Q9C0D0 580 aa10.91□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 C21orf2O43822 256 aa10.9□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 NID1P14543 1247 aa10.9□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 ADH7P40394 386 aa10.9□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 TYRO3Q06418 890 aa10.9□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 C1orf53Q5VUE5 145 aa10.9□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 TSEN2Q8NCE0 465 aaKnown RBP10.9□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 NEUROD4Q9HD90 331 aa10.9□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 BRD7Q9NPI1 651 aa10.9□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 PRDM6Q9NQX0 595 aa10.9□□□□□ -0.66
NIPSNAP3A-202ENST00000471001 HDGFL1Q5TGJ6 251 aa10.89□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 C20orf204Q6ZNR8 217 aa10.89□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 OGFOD1Q8N543 542 aa10.89□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 CEP63Q96MT8 703 aa10.89□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 KRTAP4-8Q9BYQ9 185 aa10.89□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 TPSG1Q9NRR2 321 aa10.89□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 SFI1A8K8P3 1242 aa10.88□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 ATP9BO43861 1147 aa10.88□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 KCNQ4P56696 695 aa10.88□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 FOXD4L6Q3SYB3 417 aaPredicted RBP10.88□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 NKAPLQ5M9Q1 402 aa10.88□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 FOXD4L3Q6VB84 417 aaPredicted RBP10.88□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 SUSD3Q96L08 255 aa10.88□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 ATP1A2P50993 1020 aa10.87□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 WWC1Q8IX03 1113 aa10.87□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 MKRN1Q9UHC7 482 aaKnown RBP10.87□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 M0R2N6 131 aa10.86□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 PRRT3Q5FWE3 981 aa10.86□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 SIX5Q8N196 739 aa10.86□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 LARGE2Q8N3Y3 721 aa10.86□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 ZNF594Q96JF6 807 aaPredicted RBP10.86□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 KCNH4Q9UQ05 1017 aa10.86□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 RAD21O60216 631 aa10.85□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 PALM3A6NDB9 673 aaPredicted RBP10.84□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 SPDYE3A6NKU9 549 aa10.84□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 PPP1R12BO60237 982 aaPredicted RBP10.84□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 GRIK4Q16099 956 aa10.84□□□□□ -0.67
NIPSNAP3A-202ENST00000471001 UBTFP17480 764 aaKnown RBP10.83□□□□□ -0.68
NIPSNAP3A-202ENST00000471001 ZMYM1Q5SVZ6 1142 aa10.83□□□□□ -0.68
NIPSNAP3A-202ENST00000471001 APBA3O96018 575 aa10.82□□□□□ -0.68
NIPSNAP3A-202ENST00000471001 ALDH16A1Q8IZ83 802 aa10.82□□□□□ -0.68
NIPSNAP3A-202ENST00000471001 BHMTQ93088 406 aa10.82□□□□□ -0.68
NIPSNAP3A-202ENST00000471001 ANKIB1Q9P2G1 1089 aa10.82□□□□□ -0.68
NIPSNAP3A-202ENST00000471001 BTLAQ7Z6A9 289 aa10.81□□□□□ -0.68
NIPSNAP3A-202ENST00000471001 C2orf49Q9BVC5 232 aaPredicted RBP10.81□□□□□ -0.68
NIPSNAP3A-202ENST00000471001 DYRK3O43781 588 aa10.8□□□□□ -0.68
NIPSNAP3A-202ENST00000471001 TRIM28Q13263 835 aaKnown RBP10.8□□□□□ -0.68
NIPSNAP3A-202ENST00000471001 ATAD2Q6PL18 1390 aa10.79□□□□□ -0.68
NIPSNAP3A-202ENST00000471001 NEUROD1Q13562 356 aa10.79□□□□□ -0.68
NIPSNAP3A-202ENST00000471001 GAS2L2Q8NHY3 880 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms