RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 STK31Q9BXU1 1019 aa13.5□□□□□ -0.25
SRGAP3-204ENST00000470951 SMC3Q9UQE7 1217 aa13.5□□□□□ -0.25
SRGAP3-204ENST00000470951 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
SRGAP3-204ENST00000470951 RAB11FIP3O75154 756 aa13.49□□□□□ -0.25
SRGAP3-204ENST00000470951 ATP2B3Q16720 1220 aa13.49□□□□□ -0.25
SRGAP3-204ENST00000470951 FOXD4L6Q3SYB3 417 aaPredicted RBP13.49□□□□□ -0.25
SRGAP3-204ENST00000470951 TSHZ3Q63HK5 1081 aa13.49□□□□□ -0.25
SRGAP3-204ENST00000470951 FOXD4L3Q6VB84 417 aaPredicted RBP13.49□□□□□ -0.25
SRGAP3-204ENST00000470951 CERS3Q8IU89 383 aa13.49□□□□□ -0.25
SRGAP3-204ENST00000470951 RTF1Q92541 710 aaKnown RBP13.49□□□□□ -0.25
SRGAP3-204ENST00000470951 TSC1Q92574 1164 aa13.49□□□□□ -0.25
SRGAP3-204ENST00000470951 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
SRGAP3-204ENST00000470951 RIOK3O14730 519 aaKnown RBP13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 C17orf53Q8N3J3 647 aaPredicted RBP13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 KCNF1Q9H3M0 494 aa13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 TTC21BQ7Z4L5 1316 aa13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 NALCNQ8IZF0 1738 aa13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 F6X3S4 739 aa13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 SGSM2O43147 1006 aa13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 LTKP29376 864 aa13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 G2E3Q7L622 706 aa13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 JARID2Q92833 1246 aaPredicted RBP13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 NUDT16Q96DE0 195 aaKnown RBP13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 SIRT1Q96EB6 747 aa13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 ZSCAN31Q96LW9 406 aaPredicted RBP13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 GEMIN8Q9NWZ8 242 aaKnown RBP13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 SNX14Q9Y5W7 946 aa13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 CHD2O14647 1828 aaKnown RBP13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 CRYBG1Q9Y4K1 1723 aa13.48□□□□□ -0.25
SRGAP3-204ENST00000470951 PNMA6EA0A0J9YXQ4 647 aa13.47□□□□□ -0.25
SRGAP3-204ENST00000470951 MPNDQ8N594 471 aa13.47□□□□□ -0.25
SRGAP3-204ENST00000470951 SH2B1Q9NRF2 756 aaPredicted RBP13.47□□□□□ -0.25
SRGAP3-204ENST00000470951 TMEM2Q9UHN6 1383 aa13.47□□□□□ -0.25
SRGAP3-204ENST00000470951 SOX12O15370 315 aa13.47□□□□□ -0.25
SRGAP3-204ENST00000470951 ECM2O94769 699 aaPredicted RBP13.47□□□□□ -0.25
SRGAP3-204ENST00000470951 AK2P54819 239 aa13.47□□□□□ -0.25
SRGAP3-204ENST00000470951 UNC5CLQ8IV45 518 aa13.47□□□□□ -0.25
SRGAP3-204ENST00000470951 FAM200AQ8TCP9 573 aa13.47□□□□□ -0.25
SRGAP3-204ENST00000470951 CGNQ9P2M7 1197 aaKnown RBP13.47□□□□□ -0.25
SRGAP3-204ENST00000470951 TSPYL4Q9UJ04 414 aa13.47□□□□□ -0.25
SRGAP3-204ENST00000470951 PYCARDQ9ULZ3 195 aa13.47□□□□□ -0.25
SRGAP3-204ENST00000470951 NCKAP5LQ9HCH0 1330 aa13.47□□□□□ -0.25
SRGAP3-204ENST00000470951 FIBPO43427 364 aa13.46□□□□□ -0.25
SRGAP3-204ENST00000470951 GIMAP6Q6P9H5 292 aa13.46□□□□□ -0.25
SRGAP3-204ENST00000470951 TXNDC2Q86VQ3 553 aa13.46□□□□□ -0.25
SRGAP3-204ENST00000470951 CCDC30Q5VVM6 783 aa13.46□□□□□ -0.26
SRGAP3-204ENST00000470951 RUFY3Q7L099 469 aa13.46□□□□□ -0.26
SRGAP3-204ENST00000470951 SSH3Q8TE77 659 aa13.46□□□□□ -0.26
SRGAP3-204ENST00000470951 LSG1Q9H089 658 aaKnown RBP13.46□□□□□ -0.26
SRGAP3-204ENST00000470951 OGFRQ9NZT2 677 aa13.46□□□□□ -0.26
SRGAP3-204ENST00000470951 CCDC171Q6TFL3 1326 aa13.46□□□□□ -0.26
SRGAP3-204ENST00000470951 FMN2Q9NZ56 1722 aa13.45□□□□□ -0.26
SRGAP3-204ENST00000470951 FAM193AP78312 1265 aa13.45□□□□□ -0.26
SRGAP3-204ENST00000470951 FLIIQ13045 1269 aa13.45□□□□□ -0.26
SRGAP3-204ENST00000470951 CNTROBQ8N137 903 aa13.45□□□□□ -0.26
SRGAP3-204ENST00000470951 ELP1O95163 1332 aa13.45□□□□□ -0.26
SRGAP3-204ENST00000470951 LRRC37A3O60309 1634 aa13.45□□□□□ -0.26
SRGAP3-204ENST00000470951 OVOS2A0A0J9YW53 1432 aa13.45□□□□□ -0.26
SRGAP3-204ENST00000470951 TECPR2O15040 1411 aa13.45□□□□□ -0.26
SRGAP3-204ENST00000470951 OVOS2Q6IE36 1432 aa13.45□□□□□ -0.26
SRGAP3-204ENST00000470951 SMTNL1A8MU46 457 aa13.45□□□□□ -0.26
SRGAP3-204ENST00000470951 RGL2O15211 777 aa13.45□□□□□ -0.26
SRGAP3-204ENST00000470951 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.45□□□□□ -0.26
SRGAP3-204ENST00000470951 TM6SF1Q9BZW5 370 aa13.45□□□□□ -0.26
SRGAP3-204ENST00000470951 MTMR6Q9Y217 621 aa13.45□□□□□ -0.26
SRGAP3-204ENST00000470951 AP5Z1O43299 807 aa13.44□□□□□ -0.26
SRGAP3-204ENST00000470951 HTATSF1O43719 755 aaKnown RBP13.44□□□□□ -0.26
SRGAP3-204ENST00000470951 VPS53Q5VIR6 699 aa13.44□□□□□ -0.26
SRGAP3-204ENST00000470951 LMOD2Q6P5Q4 547 aa13.44□□□□□ -0.26
SRGAP3-204ENST00000470951 PEAK1Q9H792 1746 aa13.44□□□□□ -0.26
SRGAP3-204ENST00000470951 NRXN3Q9Y4C0 1643 aa13.44□□□□□ -0.26
SRGAP3-204ENST00000470951 MAP3K11Q16584 847 aa13.44□□□□□ -0.26
SRGAP3-204ENST00000470951 PI4K2BQ8TCG2 481 aa13.44□□□□□ -0.26
SRGAP3-204ENST00000470951 IL25Q9H293 177 aa13.44□□□□□ -0.26
SRGAP3-204ENST00000470951 PAXBP1Q9Y5B6 917 aa13.44□□□□□ -0.26
SRGAP3-204ENST00000470951 GABPB1Q06547 395 aaPredicted RBP13.43□□□□□ -0.26
SRGAP3-204ENST00000470951 ANKLE2Q86XL3 938 aa13.43□□□□□ -0.26
SRGAP3-204ENST00000470951 HYPKQ9NX55 129 aa13.43□□□□□ -0.26
SRGAP3-204ENST00000470951 LRRFIP2Q9Y608 721 aaKnown RBP13.43□□□□□ -0.26
SRGAP3-204ENST00000470951 MAP3K5Q99683 1374 aa13.43□□□□□ -0.26
SRGAP3-204ENST00000470951 UBTFL1P0CB47 393 aaPredicted RBP13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 GJB2P29033 226 aa13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 DNM1Q05193 864 aaKnown RBP13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 RUFY2Q8WXA3 655 aa13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 KCNB2Q92953 911 aa13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 PSMD1Q99460 953 aa13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 EID1Q9Y6B2 187 aa13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 SLIT1O75093 1534 aa13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 ARHGAP23Q9P227 1491 aa13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 KDRP35968 1356 aa13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 USP31Q70CQ4 1352 aa13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 USP42Q9H9J4 1324 aaKnown RBP13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 KRT85P78386 507 aa13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 POLA2Q14181 598 aa13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 KIF1BPQ96EK5 621 aa13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 NUP62CLQ9H1M0 184 aa13.42□□□□□ -0.26
SRGAP3-204ENST00000470951 CAVIN2O95810 425 aa13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 MYCNP04198 464 aaPredicted RBP13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 PDCP20941 246 aa13.41□□□□□ -0.26
SRGAP3-204ENST00000470951 U2AF2P26368 475 aaKnown RBP eCLIP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms