RNA–Protein interactions for RNA: ENST00000470503.1

GCFC2-207, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best) BASIC

Gene GCFC2, Length 1,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-207ENST00000470503 SRGNP10124 158 aa25.77■■□□□ 1.72
GCFC2-207ENST00000470503 JMYQ8N9B5 988 aa25.77■■□□□ 1.72
GCFC2-207ENST00000470503 TAF7Q15545 349 aaPredicted RBP25.76■■□□□ 1.71
GCFC2-207ENST00000470503 MCM10Q7L590 875 aa25.76■■□□□ 1.71
GCFC2-207ENST00000470503 TAOK3Q9H2K8 898 aa25.76■■□□□ 1.71
GCFC2-207ENST00000470503 ERFEQ4G0M1 354 aa25.75■■□□□ 1.71
GCFC2-207ENST00000470503 NBPF5PQ86XG9 351 aaPredicted RBP25.75■■□□□ 1.71
GCFC2-207ENST00000470503 TPTE2Q6XPS3 522 aa25.74■■□□□ 1.71
GCFC2-207ENST00000470503 WDR90Q96KV7 1748 aa25.74■■□□□ 1.71
GCFC2-207ENST00000470503 CCDC24Q8N4L8 307 aa25.73■■□□□ 1.71
GCFC2-207ENST00000470503 PNISRQ8TF01 805 aaKnown RBP25.73■■□□□ 1.71
GCFC2-207ENST00000470503 PRPF40BQ6NWY9 871 aaKnown RBP25.72■■□□□ 1.71
GCFC2-207ENST00000470503 KLRG2A4D1S0 409 aaPredicted RBP25.71■■□□□ 1.71
GCFC2-207ENST00000470503 ANKRD31Q8N7Z5 1873 aa25.7■■□□□ 1.71
GCFC2-207ENST00000470503 PRAMEF22A3QJZ6 481 aa25.7■■□□□ 1.7
GCFC2-207ENST00000470503 NPR1P16066 1061 aa25.7■■□□□ 1.7
GCFC2-207ENST00000470503 ZNF219Q9P2Y4 722 aaPredicted RBP25.7■■□□□ 1.7
GCFC2-207ENST00000470503 DCTN1Q14203 1278 aa25.69■■□□□ 1.7
GCFC2-207ENST00000470503 PNNQ9H307 717 aaKnown RBP25.69■■□□□ 1.7
GCFC2-207ENST00000470503 POTECB2RU33 542 aa25.68■■□□□ 1.7
GCFC2-207ENST00000470503 NBPF26B4DH59 902 aa25.68■■□□□ 1.7
GCFC2-207ENST00000470503 PIP4K2AP48426 406 aaPredicted RBP25.68■■□□□ 1.7
GCFC2-207ENST00000470503 HTRA3P83110 453 aa25.68■■□□□ 1.7
GCFC2-207ENST00000470503 NBPF10Q6P3W6 841 aaKnown RBP25.68■■□□□ 1.7
GCFC2-207ENST00000470503 NBPF15Q8N660 670 aa25.68■■□□□ 1.7
GCFC2-207ENST00000470503 NIP7Q9Y221 180 aaKnown RBP eCLIP25.68■■□□□ 1.7
GCFC2-207ENST00000470503 CCDC93Q567U6 631 aa25.66■■□□□ 1.7
GCFC2-207ENST00000470503 C7orf43Q8WVR3 580 aa25.66■■□□□ 1.7
GCFC2-207ENST00000470503 BCORQ6W2J9 1755 aa25.66■■□□□ 1.7
GCFC2-207ENST00000470503 ALDH1B1P30837 517 aa25.65■■□□□ 1.7
GCFC2-207ENST00000470503 FER1L6Q2WGJ9 1857 aa25.65■■□□□ 1.7
GCFC2-207ENST00000470503 ERVV-1B6SEH8 477 aa25.64■■□□□ 1.7
GCFC2-207ENST00000470503 TIAM2Q8IVF5 1701 aa25.63■■□□□ 1.69
GCFC2-207ENST00000470503 IQCA1LA6NCM1 817 aa25.63■■□□□ 1.69
GCFC2-207ENST00000470503 RTKN2Q8IZC4 609 aa25.63■■□□□ 1.69
GCFC2-207ENST00000470503 NYXQ9GZU5 481 aa25.63■■□□□ 1.69
GCFC2-207ENST00000470503 COL11A2P13942 1736 aaPredicted RBP25.63■■□□□ 1.69
GCFC2-207ENST00000470503 GTF2E1P29083 439 aaPredicted RBP25.62■■□□□ 1.69
GCFC2-207ENST00000470503 CCDC88AQ3V6T2 1871 aa25.62■■□□□ 1.69
GCFC2-207ENST00000470503 FKBP4Q02790 459 aaKnown RBP eCLIP25.61■■□□□ 1.69
GCFC2-207ENST00000470503 CHADLQ6NUI6 762 aa25.61■■□□□ 1.69
GCFC2-207ENST00000470503 NFE2L2Q16236 605 aa25.6■■□□□ 1.69
GCFC2-207ENST00000470503 L3MBTL3Q96JM7 780 aaPredicted RBP25.6■■□□□ 1.69
GCFC2-207ENST00000470503 PLEKHF1Q96S99 279 aa25.6■■□□□ 1.69
GCFC2-207ENST00000470503 MIS18AQ9NYP9 233 aa25.6■■□□□ 1.69
GCFC2-207ENST00000470503 DICER1Q9UPY3 1922 aaKnown RBP25.6■■□□□ 1.69
GCFC2-207ENST00000470503 SLX4Q8IY92 1834 aa25.6■■□□□ 1.69
GCFC2-207ENST00000470503 DDNO94850 711 aaPredicted RBP25.59■■□□□ 1.69
GCFC2-207ENST00000470503 EIF4A1P60842 406 aaKnown RBP25.59■■□□□ 1.69
GCFC2-207ENST00000470503 HLFQ16534 295 aa25.59■■□□□ 1.69
GCFC2-207ENST00000470503 CC2D2BQ6DHV5 1058 aa25.58■■□□□ 1.69
GCFC2-207ENST00000470503 GRIPAP1Q4V328 841 aa25.57■■□□□ 1.68
GCFC2-207ENST00000470503 KIF6Q6ZMV9 814 aa25.57■■□□□ 1.68
GCFC2-207ENST00000470503 ERBB4Q15303 1308 aa25.57■■□□□ 1.68
GCFC2-207ENST00000470503 MAP3K15Q6ZN16 1313 aa25.57■■□□□ 1.68
GCFC2-207ENST00000470503 MAPK8IP3Q9UPT6 1336 aa25.57■■□□□ 1.68
GCFC2-207ENST00000470503 ARFGEF2Q9Y6D5 1785 aa25.56■■□□□ 1.68
GCFC2-207ENST00000470503 CREBZFQ9NS37 354 aa25.56■■□□□ 1.68
GCFC2-207ENST00000470503 CRY2Q49AN0 593 aa25.55■■□□□ 1.68
GCFC2-207ENST00000470503 LDHDQ86WU2 507 aa25.55■■□□□ 1.68
GCFC2-207ENST00000470503 IBTKQ9P2D0 1353 aaPredicted RBP25.55■■□□□ 1.68
GCFC2-207ENST00000470503 FAM177BA6PVY3 158 aa25.54■■□□□ 1.68
GCFC2-207ENST00000470503 RRP7AQ9Y3A4 280 aaKnown RBP25.54■■□□□ 1.68
GCFC2-207ENST00000470503 PSMD1Q99460 953 aa25.53■■□□□ 1.68
GCFC2-207ENST00000470503 BABAM1Q9NWV8 329 aa25.53■■□□□ 1.68
GCFC2-207ENST00000470503 NGEFQ8N5V2 710 aa25.52■■□□□ 1.68
GCFC2-207ENST00000470503 TAF1DQ9H5J8 278 aaPredicted RBP25.52■■□□□ 1.68
GCFC2-207ENST00000470503 ZNF277Q9NRM2 450 aaPredicted RBP25.52■■□□□ 1.68
GCFC2-207ENST00000470503 HOXA10P31260 410 aaPredicted RBP25.51■■□□□ 1.67
GCFC2-207ENST00000470503 IARSP41252 1262 aaKnown RBP25.51■■□□□ 1.67
GCFC2-207ENST00000470503 SYNE4Q8N205 404 aa25.51■■□□□ 1.67
GCFC2-207ENST00000470503 RIC1Q4ADV7 1423 aa25.51■■□□□ 1.67
GCFC2-207ENST00000470503 FZD9O00144 591 aa25.5■■□□□ 1.67
GCFC2-207ENST00000470503 COL13A1Q5TAT6 717 aaPredicted RBP25.5■■□□□ 1.67
GCFC2-207ENST00000470503 HACL1Q9UJ83 578 aa25.5■■□□□ 1.67
GCFC2-207ENST00000470503 LAMB4A4D0S4 1761 aa25.49■■□□□ 1.67
GCFC2-207ENST00000470503 RALBP1Q15311 655 aa25.49■■□□□ 1.67
GCFC2-207ENST00000470503 TTLL7Q6ZT98 887 aa25.49■■□□□ 1.67
GCFC2-207ENST00000470503 PNMA8AQ86V59 439 aaPredicted RBP25.49■■□□□ 1.67
GCFC2-207ENST00000470503 JDP2Q8WYK2 163 aa25.49■■□□□ 1.67
GCFC2-207ENST00000470503 RPGRQ92834 1020 aaKnown RBP25.49■■□□□ 1.67
GCFC2-207ENST00000470503 MYL6BP14649 208 aa25.48■■□□□ 1.67
GCFC2-207ENST00000470503 PARP10Q53GL7 1025 aa25.48■■□□□ 1.67
GCFC2-207ENST00000470503 GIGYF2Q6Y7W6 1299 aaKnown RBP25.48■■□□□ 1.67
GCFC2-207ENST00000470503 NUTM1Q86Y26 1132 aa25.48■■□□□ 1.67
GCFC2-207ENST00000470503 ZNF34Q8IZ26 560 aa25.48■■□□□ 1.67
GCFC2-207ENST00000470503 PASKQ96RG2 1323 aa25.47■■□□□ 1.67
GCFC2-207ENST00000470503 POTEIP0CG38 1075 aa25.47■■□□□ 1.67
GCFC2-207ENST00000470503 POTEJP0CG39 1038 aa25.47■■□□□ 1.67
GCFC2-207ENST00000470503 HSPA1AP0DMV8 641 aaKnown RBP25.47■■□□□ 1.67
GCFC2-207ENST00000470503 HSPA1BP0DMV9 641 aaKnown RBP25.47■■□□□ 1.67
GCFC2-207ENST00000470503 LMOD3Q0VAK6 560 aa25.47■■□□□ 1.67
GCFC2-207ENST00000470503 PPP1R42Q7Z4L9 355 aa25.47■■□□□ 1.67
GCFC2-207ENST00000470503 GPC2Q8N158 579 aa25.47■■□□□ 1.67
GCFC2-207ENST00000470503 RBM17Q96I25 401 aaKnown RBP25.47■■□□□ 1.67
GCFC2-207ENST00000470503 CRAMP1Q96RY5 1269 aa25.47■■□□□ 1.67
GCFC2-207ENST00000470503 THUMPD2Q9BTF0 503 aaKnown RBP25.47■■□□□ 1.67
GCFC2-207ENST00000470503 TSPYL4Q9UJ04 414 aa25.47■■□□□ 1.67
GCFC2-207ENST00000470503 SCN4AP35499 1836 aa25.47■■□□□ 1.67
GCFC2-207ENST00000470503 KDM3BQ7LBC6 1761 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms