RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 HSPA1LP34931 641 aa6.92□□□□□ -1.3
ITGA6-208ENST00000469534 SULT6B1Q6IMI4 303 aa6.92□□□□□ -1.3
ITGA6-208ENST00000469534 ARHGEF25Q86VW2 580 aa6.92□□□□□ -1.3
ITGA6-208ENST00000469534 ANKRD24Q8TF21 1146 aa6.92□□□□□ -1.3
ITGA6-208ENST00000469534 IP6K1Q92551 441 aa6.92□□□□□ -1.3
ITGA6-208ENST00000469534 PRDM11Q9NQV5 511 aa6.92□□□□□ -1.3
ITGA6-208ENST00000469534 PLCH1Q4KWH8 1693 aa6.91□□□□□ -1.3
ITGA6-208ENST00000469534 VIRMAQ69YN4 1812 aaKnown RBP6.91□□□□□ -1.3
ITGA6-208ENST00000469534 COL22A1Q8NFW1 1626 aaPredicted RBP6.9□□□□□ -1.3
ITGA6-208ENST00000469534 RNF223E7ERA6 249 aa6.9□□□□□ -1.3
ITGA6-208ENST00000469534 NBPF6Q5VWK0 638 aa6.9□□□□□ -1.3
ITGA6-208ENST00000469534 ZNF787Q6DD87 383 aa6.9□□□□□ -1.3
ITGA6-208ENST00000469534 TCP11L2Q8N4U5 519 aa6.9□□□□□ -1.3
ITGA6-208ENST00000469534 EMID1Q96A84 441 aaPredicted RBP6.9□□□□□ -1.3
ITGA6-208ENST00000469534 RUNDC1Q96C34 613 aa6.9□□□□□ -1.3
ITGA6-208ENST00000469534 PHACTR3Q96KR7 559 aa6.9□□□□□ -1.3
ITGA6-208ENST00000469534 NBPF4Q96M43 638 aa6.9□□□□□ -1.3
ITGA6-208ENST00000469534 RSPH6AQ9H0K4 717 aa6.9□□□□□ -1.3
ITGA6-208ENST00000469534 NLRP2Q9NX02 1062 aa6.9□□□□□ -1.3
ITGA6-208ENST00000469534 DAXXQ9UER7 740 aaPredicted RBP6.9□□□□□ -1.3
ITGA6-208ENST00000469534 MAPK8IP3Q9UPT6 1336 aa6.9□□□□□ -1.3
ITGA6-208ENST00000469534 RTL1A6NKG5 1358 aa6.9□□□□□ -1.31
ITGA6-208ENST00000469534 INSRP06213 1382 aa6.9□□□□□ -1.31
ITGA6-208ENST00000469534 IQSEC2Q5JU85 1478 aa6.9□□□□□ -1.31
ITGA6-208ENST00000469534 LMO7Q8WWI1 1683 aa6.9□□□□□ -1.31
ITGA6-208ENST00000469534 CAMTA1Q9Y6Y1 1673 aa6.9□□□□□ -1.31
ITGA6-208ENST00000469534 FAM83GA6ND36 823 aa6.89□□□□□ -1.31
ITGA6-208ENST00000469534 TLL1O43897 1013 aa6.89□□□□□ -1.31
ITGA6-208ENST00000469534 CENPBP07199 599 aaPredicted RBP6.89□□□□□ -1.31
ITGA6-208ENST00000469534 PLEKHF1Q96S99 279 aa6.89□□□□□ -1.31
ITGA6-208ENST00000469534 THUMPD2Q9BTF0 503 aaKnown RBP6.89□□□□□ -1.31
ITGA6-208ENST00000469534 USP35Q9P2H5 1018 aa6.89□□□□□ -1.31
ITGA6-208ENST00000469534 COL14A1Q05707 1796 aaKnown RBP6.89□□□□□ -1.31
ITGA6-208ENST00000469534 KAT6BQ8WYB5 2073 aa6.88□□□□□ -1.31
ITGA6-208ENST00000469534 FAM208AQ9UK61 1670 aaKnown RBP6.88□□□□□ -1.31
ITGA6-208ENST00000469534 ZBED9Q6R2W3 1325 aa6.88□□□□□ -1.31
ITGA6-208ENST00000469534 IGSF1Q8N6C5 1336 aa6.88□□□□□ -1.31
ITGA6-208ENST00000469534 EVA1CP58658 441 aa6.88□□□□□ -1.31
ITGA6-208ENST00000469534 DCTN1Q14203 1278 aa6.88□□□□□ -1.31
ITGA6-208ENST00000469534 SCUBE3Q8IX30 993 aa6.88□□□□□ -1.31
ITGA6-208ENST00000469534 PHOX2BQ99453 314 aa6.88□□□□□ -1.31
ITGA6-208ENST00000469534 BTG4Q9NY30 223 aa6.88□□□□□ -1.31
ITGA6-208ENST00000469534 LRP6O75581 1613 aa6.87□□□□□ -1.31
ITGA6-208ENST00000469534 COL5A2P05997 1499 aaPredicted RBP6.87□□□□□ -1.31
ITGA6-208ENST00000469534 NR1I2O75469 434 aa6.87□□□□□ -1.31
ITGA6-208ENST00000469534 NEFMP07197 916 aa6.87□□□□□ -1.31
ITGA6-208ENST00000469534 TMPOP42166 694 aaKnown RBP6.87□□□□□ -1.31
ITGA6-208ENST00000469534 RIPK4P57078 832 aa6.87□□□□□ -1.31
ITGA6-208ENST00000469534 MEX3CQ5U5Q3 659 aaKnown RBP6.87□□□□□ -1.31
ITGA6-208ENST00000469534 LARP1Q6PKG0 1096 aaKnown RBP6.87□□□□□ -1.31
ITGA6-208ENST00000469534 TOM1L2Q6ZVM7 507 aa6.87□□□□□ -1.31
ITGA6-208ENST00000469534 VSIG10Q8N0Z9 540 aa6.87□□□□□ -1.31
ITGA6-208ENST00000469534 ANKLE1Q8NAG6 615 aa6.87□□□□□ -1.31
ITGA6-208ENST00000469534 C8orf37Q96NL8 207 aa6.87□□□□□ -1.31
ITGA6-208ENST00000469534 CCDC9Q9Y3X0 531 aaKnown RBP6.87□□□□□ -1.31
ITGA6-208ENST00000469534 LAS1LQ9Y4W2 734 aaKnown RBP6.87□□□□□ -1.31
ITGA6-208ENST00000469534 NRAPQ86VF7 1730 aa6.87□□□□□ -1.31
ITGA6-208ENST00000469534 CPDO75976 1380 aa6.86□□□□□ -1.31
ITGA6-208ENST00000469534 JCADQ9P266 1359 aa6.86□□□□□ -1.31
ITGA6-208ENST00000469534 ADH1BP00325 375 aa6.86□□□□□ -1.31
ITGA6-208ENST00000469534 SLC19A1P41440 591 aa6.86□□□□□ -1.31
ITGA6-208ENST00000469534 MTHFSDQ2M296 383 aaKnown RBP6.86□□□□□ -1.31
ITGA6-208ENST00000469534 GPIHBP1Q8IV16 184 aa6.86□□□□□ -1.31
ITGA6-208ENST00000469534 MEGF6O75095 1541 aa6.86□□□□□ -1.31
ITGA6-208ENST00000469534 WNK3Q9BYP7 1800 aa6.85□□□□□ -1.31
ITGA6-208ENST00000469534 KIF24Q5T7B8 1368 aa6.85□□□□□ -1.31
ITGA6-208ENST00000469534 PPEF1O14829 653 aaPredicted RBP6.85□□□□□ -1.31
ITGA6-208ENST00000469534 S1PR4O95977 384 aa6.85□□□□□ -1.31
ITGA6-208ENST00000469534 NFE2L2Q16236 605 aa6.85□□□□□ -1.31
ITGA6-208ENST00000469534 PUS10Q3MIT2 529 aaKnown RBP6.85□□□□□ -1.31
ITGA6-208ENST00000469534 TRIM67Q6ZTA4 783 aa6.85□□□□□ -1.31
ITGA6-208ENST00000469534 MCM10Q7L590 875 aa6.85□□□□□ -1.31
ITGA6-208ENST00000469534 NLRP7Q8WX94 980 aa6.85□□□□□ -1.31
ITGA6-208ENST00000469534 PARP4Q9UKK3 1724 aaKnown RBP6.84□□□□□ -1.31
ITGA6-208ENST00000469534 WDR17Q8IZU2 1322 aa6.84□□□□□ -1.31
ITGA6-208ENST00000469534 IRX6P78412 446 aaPredicted RBP6.84□□□□□ -1.31
ITGA6-208ENST00000469534 ZNF530Q6P9A1 599 aaPredicted RBP6.84□□□□□ -1.31
ITGA6-208ENST00000469534 WWC1Q8IX03 1113 aa6.84□□□□□ -1.31
ITGA6-208ENST00000469534 TSR2Q969E8 191 aaKnown RBP6.84□□□□□ -1.31
ITGA6-208ENST00000469534 NGLY1Q96IV0 654 aa6.84□□□□□ -1.31
ITGA6-208ENST00000469534 SHANK3Q9BYB0 1731 aa6.84□□□□□ -1.31
ITGA6-208ENST00000469534 TATP17735 454 aaPredicted RBP6.83□□□□□ -1.32
ITGA6-208ENST00000469534 GCGRP47871 477 aa6.83□□□□□ -1.32
ITGA6-208ENST00000469534 PKDCCQ504Y2 493 aa6.83□□□□□ -1.32
ITGA6-208ENST00000469534 MORN1Q5T089 497 aa6.83□□□□□ -1.32
ITGA6-208ENST00000469534 SPRYD7Q5W111 196 aa6.83□□□□□ -1.32
ITGA6-208ENST00000469534 LIAT1Q6ZQX7 453 aa6.83□□□□□ -1.32
ITGA6-208ENST00000469534 RAPGEF4Q8WZA2 1011 aa6.83□□□□□ -1.32
ITGA6-208ENST00000469534 SLC6A16Q9GZN6 736 aa6.83□□□□□ -1.32
ITGA6-208ENST00000469534 PNNQ9H307 717 aaKnown RBP6.83□□□□□ -1.32
ITGA6-208ENST00000469534 MIS18AQ9NYP9 233 aa6.83□□□□□ -1.32
ITGA6-208ENST00000469534 NWD2Q9ULI1 1742 aa6.83□□□□□ -1.32
ITGA6-208ENST00000469534 KDRP35968 1356 aa6.82□□□□□ -1.32
ITGA6-208ENST00000469534 ZNF521Q96K83 1311 aa6.82□□□□□ -1.32
ITGA6-208ENST00000469534 ABCC6O95255 1503 aa6.82□□□□□ -1.32
ITGA6-208ENST00000469534 PKD1L3Q7Z443 1732 aa6.82□□□□□ -1.32
ITGA6-208ENST00000469534 DDX11L8A8MPP1 907 aa6.82□□□□□ -1.32
ITGA6-208ENST00000469534 PRR20EP86478 221 aa6.82□□□□□ -1.32
ITGA6-208ENST00000469534 PRR20CP86479 221 aa6.82□□□□□ -1.32
ITGA6-208ENST00000469534 PRR20DP86480 221 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms