RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 HTRA3P83110 453 aa16.88■□□□□ 0.29
GAPVD1-214ENST00000469528 PRELPP51888 382 aa16.87■□□□□ 0.29
GAPVD1-214ENST00000469528 WDR90Q96KV7 1748 aa16.87■□□□□ 0.29
GAPVD1-214ENST00000469528 COL3A1P02461 1466 aaPredicted RBP16.86■□□□□ 0.29
GAPVD1-214ENST00000469528 KCNQ3O43525 872 aa16.86■□□□□ 0.29
GAPVD1-214ENST00000469528 TAF7Q15545 349 aaPredicted RBP16.86■□□□□ 0.29
GAPVD1-214ENST00000469528 CCDC24Q8N4L8 307 aa16.86■□□□□ 0.29
GAPVD1-214ENST00000469528 DLEC1Q9Y238 1755 aa16.85■□□□□ 0.29
GAPVD1-214ENST00000469528 IQCA1LA6NCM1 817 aa16.85■□□□□ 0.29
GAPVD1-214ENST00000469528 NPR1P16066 1061 aa16.85■□□□□ 0.29
GAPVD1-214ENST00000469528 PRPF40BQ6NWY9 871 aaKnown RBP16.85■□□□□ 0.29
GAPVD1-214ENST00000469528 PNISRQ8TF01 805 aaKnown RBP16.85■□□□□ 0.29
GAPVD1-214ENST00000469528 GTF2E1P29083 439 aaPredicted RBP16.84■□□□□ 0.29
GAPVD1-214ENST00000469528 PPP2R1AP30153 589 aa16.84■□□□□ 0.29
GAPVD1-214ENST00000469528 ALDH1B1P30837 517 aa16.84■□□□□ 0.29
GAPVD1-214ENST00000469528 MCM10Q7L590 875 aa16.84■□□□□ 0.29
GAPVD1-214ENST00000469528 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
GAPVD1-214ENST00000469528 POTECB2RU33 542 aa16.83■□□□□ 0.28
GAPVD1-214ENST00000469528 CCDC93Q567U6 631 aa16.83■□□□□ 0.28
GAPVD1-214ENST00000469528 CHADLQ6NUI6 762 aa16.83■□□□□ 0.28
GAPVD1-214ENST00000469528 RTKN2Q8IZC4 609 aa16.83■□□□□ 0.28
GAPVD1-214ENST00000469528 NIP7Q9Y221 180 aaKnown RBP eCLIP16.83■□□□□ 0.28
GAPVD1-214ENST00000469528 CCDC88AQ3V6T2 1871 aa16.82■□□□□ 0.28
GAPVD1-214ENST00000469528 KLRG2A4D1S0 409 aaPredicted RBP16.81■□□□□ 0.28
GAPVD1-214ENST00000469528 DDNO94850 711 aaPredicted RBP16.81■□□□□ 0.28
GAPVD1-214ENST00000469528 NYXQ9GZU5 481 aa16.81■□□□□ 0.28
GAPVD1-214ENST00000469528 SIPA1L3O60292 1781 aaPredicted RBP16.8■□□□□ 0.28
GAPVD1-214ENST00000469528 COL13A1Q5TAT6 717 aaPredicted RBP16.8■□□□□ 0.28
GAPVD1-214ENST00000469528 CREBZFQ9NS37 354 aa16.8■□□□□ 0.28
GAPVD1-214ENST00000469528 PRAMEF22A3QJZ6 481 aa16.79■□□□□ 0.28
GAPVD1-214ENST00000469528 PIP4K2AP48426 406 aaPredicted RBP16.79■□□□□ 0.28
GAPVD1-214ENST00000469528 FKBP4Q02790 459 aaKnown RBP eCLIP16.79■□□□□ 0.28
GAPVD1-214ENST00000469528 C7orf43Q8WVR3 580 aa16.79■□□□□ 0.28
GAPVD1-214ENST00000469528 ERVV-1B6SEH8 477 aa16.78■□□□□ 0.28
GAPVD1-214ENST00000469528 DCTN1Q14203 1278 aa16.78■□□□□ 0.28
GAPVD1-214ENST00000469528 GRIPAP1Q4V328 841 aa16.78■□□□□ 0.28
GAPVD1-214ENST00000469528 TNS4Q8IZW8 715 aa16.78■□□□□ 0.28
GAPVD1-214ENST00000469528 SCN7AQ01118 1682 aa16.78■□□□□ 0.28
GAPVD1-214ENST00000469528 DICER1Q9UPY3 1922 aaKnown RBP16.77■□□□□ 0.28
GAPVD1-214ENST00000469528 NBPF26B4DH59 902 aa16.77■□□□□ 0.28
GAPVD1-214ENST00000469528 CC2D2BQ6DHV5 1058 aa16.77■□□□□ 0.28
GAPVD1-214ENST00000469528 NBPF10Q6P3W6 841 aaKnown RBP16.77■□□□□ 0.28
GAPVD1-214ENST00000469528 LDHDQ86WU2 507 aa16.77■□□□□ 0.28
GAPVD1-214ENST00000469528 NBPF15Q8N660 670 aa16.77■□□□□ 0.28
GAPVD1-214ENST00000469528 L3MBTL3Q96JM7 780 aaPredicted RBP16.77■□□□□ 0.28
GAPVD1-214ENST00000469528 FER1L6Q2WGJ9 1857 aa16.77■□□□□ 0.27
GAPVD1-214ENST00000469528 ANKRD31Q8N7Z5 1873 aa16.77■□□□□ 0.27
GAPVD1-214ENST00000469528 FAM177BA6PVY3 158 aa16.76■□□□□ 0.27
GAPVD1-214ENST00000469528 KIF6Q6ZMV9 814 aa16.76■□□□□ 0.27
GAPVD1-214ENST00000469528 PNMA8AQ86V59 439 aaPredicted RBP16.76■□□□□ 0.27
GAPVD1-214ENST00000469528 JDP2Q8WYK2 163 aa16.76■□□□□ 0.27
GAPVD1-214ENST00000469528 HSPA1AP0DMV8 641 aaKnown RBP16.75■□□□□ 0.27
GAPVD1-214ENST00000469528 HSPA1BP0DMV9 641 aaKnown RBP16.75■□□□□ 0.27
GAPVD1-214ENST00000469528 TMX4Q9H1E5 349 aaPredicted RBP16.75■□□□□ 0.27
GAPVD1-214ENST00000469528 MIS18AQ9NYP9 233 aa16.75■□□□□ 0.27
GAPVD1-214ENST00000469528 TIAM2Q8IVF5 1701 aa16.75■□□□□ 0.27
GAPVD1-214ENST00000469528 SLX4Q8IY92 1834 aa16.75■□□□□ 0.27
GAPVD1-214ENST00000469528 HLFQ16534 295 aa16.74■□□□□ 0.27
GAPVD1-214ENST00000469528 SYNE4Q8N205 404 aa16.74■□□□□ 0.27
GAPVD1-214ENST00000469528 NGEFQ8N5V2 710 aa16.74■□□□□ 0.27
GAPVD1-214ENST00000469528 TAF1DQ9H5J8 278 aaPredicted RBP16.74■□□□□ 0.27
GAPVD1-214ENST00000469528 ZNF277Q9NRM2 450 aaPredicted RBP16.74■□□□□ 0.27
GAPVD1-214ENST00000469528 HACL1Q9UJ83 578 aa16.74■□□□□ 0.27
GAPVD1-214ENST00000469528 CLEC11AQ9Y240 323 aa16.74■□□□□ 0.27
GAPVD1-214ENST00000469528 RRP7AQ9Y3A4 280 aaKnown RBP16.74■□□□□ 0.27
GAPVD1-214ENST00000469528 IARSP41252 1262 aaKnown RBP16.73■□□□□ 0.27
GAPVD1-214ENST00000469528 RPGRQ92834 1020 aaKnown RBP16.73■□□□□ 0.27
GAPVD1-214ENST00000469528 PSMD1Q99460 953 aa16.73■□□□□ 0.27
GAPVD1-214ENST00000469528 EAPPQ56P03 285 aaPredicted RBP16.72■□□□□ 0.27
GAPVD1-214ENST00000469528 GPC2Q8N158 579 aa16.72■□□□□ 0.27
GAPVD1-214ENST00000469528 MAP3K15Q6ZN16 1313 aa16.71■□□□□ 0.27
GAPVD1-214ENST00000469528 MAPK8IP3Q9UPT6 1336 aa16.71■□□□□ 0.27
GAPVD1-214ENST00000469528 TMEM88BA6NKF7 163 aa16.71■□□□□ 0.27
GAPVD1-214ENST00000469528 FZD9O00144 591 aa16.71■□□□□ 0.27
GAPVD1-214ENST00000469528 EIF6P56537 245 aaKnown RBP16.71■□□□□ 0.27
GAPVD1-214ENST00000469528 EIF4A1P60842 406 aaKnown RBP16.71■□□□□ 0.27
GAPVD1-214ENST00000469528 NFE2L2Q16236 605 aa16.71■□□□□ 0.27
GAPVD1-214ENST00000469528 CRY2Q49AN0 593 aa16.71■□□□□ 0.27
GAPVD1-214ENST00000469528 PPP1R42Q7Z4L9 355 aa16.71■□□□□ 0.27
GAPVD1-214ENST00000469528 RBM17Q96I25 401 aaKnown RBP16.71■□□□□ 0.27
GAPVD1-214ENST00000469528 MKRN1Q9UHC7 482 aaKnown RBP16.71■□□□□ 0.27
GAPVD1-214ENST00000469528 BCORQ6W2J9 1755 aa16.71■□□□□ 0.27
GAPVD1-214ENST00000469528 EPHX2P34913 555 aa16.7■□□□□ 0.26
GAPVD1-214ENST00000469528 COL11A2P13942 1736 aaPredicted RBP16.7■□□□□ 0.26
GAPVD1-214ENST00000469528 ERBB4Q15303 1308 aa16.7■□□□□ 0.26
GAPVD1-214ENST00000469528 PASKQ96RG2 1323 aa16.7■□□□□ 0.26
GAPVD1-214ENST00000469528 PCNTO95613 3336 aa16.69■□□□□ 0.26
GAPVD1-214ENST00000469528 SCN4AP35499 1836 aa16.69■□□□□ 0.26
GAPVD1-214ENST00000469528 POTEIP0CG38 1075 aa16.69■□□□□ 0.26
GAPVD1-214ENST00000469528 POTEJP0CG39 1038 aa16.69■□□□□ 0.26
GAPVD1-214ENST00000469528 MYL6BP14649 208 aa16.69■□□□□ 0.26
GAPVD1-214ENST00000469528 HOXA10P31260 410 aaPredicted RBP16.69■□□□□ 0.26
GAPVD1-214ENST00000469528 CRAMP1Q96RY5 1269 aa16.69■□□□□ 0.26
GAPVD1-214ENST00000469528 PLEKHF1Q96S99 279 aa16.69■□□□□ 0.26
GAPVD1-214ENST00000469528 LMOD1P29536 600 aaPredicted RBP16.68■□□□□ 0.26
GAPVD1-214ENST00000469528 PARP10Q53GL7 1025 aa16.68■□□□□ 0.26
GAPVD1-214ENST00000469528 GIGYF2Q6Y7W6 1299 aaKnown RBP16.68■□□□□ 0.26
GAPVD1-214ENST00000469528 NUTM1Q86Y26 1132 aa16.68■□□□□ 0.26
GAPVD1-214ENST00000469528 AIDAQ96BJ3 306 aa16.68■□□□□ 0.26
GAPVD1-214ENST00000469528 NLRP3Q96P20 1036 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms