RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 RAB11FIP3O75154 756 aa11.57□□□□□ -0.56
SMC1A-205ENST00000469129 AIMP1Q12904 312 aaKnown RBP11.57□□□□□ -0.56
SMC1A-205ENST00000469129 MTX1Q13505 466 aa11.57□□□□□ -0.56
SMC1A-205ENST00000469129 VPS72Q15906 364 aa11.57□□□□□ -0.56
SMC1A-205ENST00000469129 DDB1Q16531 1140 aa11.57□□□□□ -0.56
SMC1A-205ENST00000469129 ERICH6Q7L0X2 663 aa11.57□□□□□ -0.56
SMC1A-205ENST00000469129 SSH3Q8TE77 659 aa11.57□□□□□ -0.56
SMC1A-205ENST00000469129 METTL22Q9BUU2 404 aaPredicted RBP11.57□□□□□ -0.56
SMC1A-205ENST00000469129 LRRCC1Q9C099 1032 aa11.57□□□□□ -0.56
SMC1A-205ENST00000469129 USP16Q9Y5T5 823 aa11.57□□□□□ -0.56
SMC1A-205ENST00000469129 BCORQ6W2J9 1755 aa11.56□□□□□ -0.56
SMC1A-205ENST00000469129 GRM8O00222 908 aa11.56□□□□□ -0.56
SMC1A-205ENST00000469129 POLA2Q14181 598 aa11.56□□□□□ -0.56
SMC1A-205ENST00000469129 ANKRD13DQ6ZTN6 518 aa11.56□□□□□ -0.56
SMC1A-205ENST00000469129 COPS6Q7L5N1 327 aa11.56□□□□□ -0.56
SMC1A-205ENST00000469129 PLBD2Q8NHP8 589 aa11.56□□□□□ -0.56
SMC1A-205ENST00000469129 CCDC9Q9Y3X0 531 aaKnown RBP11.56□□□□□ -0.56
SMC1A-205ENST00000469129 LAMB2P55268 1798 aa11.56□□□□□ -0.56
SMC1A-205ENST00000469129 PNMA6EA0A0J9YXQ4 647 aa11.55□□□□□ -0.56
SMC1A-205ENST00000469129 LRP10Q7Z4F1 713 aa11.55□□□□□ -0.56
SMC1A-205ENST00000469129 MYD88Q99836 296 aa11.55□□□□□ -0.56
SMC1A-205ENST00000469129 BTAF1O14981 1849 aa11.55□□□□□ -0.56
SMC1A-205ENST00000469129 SBF2Q86WG5 1849 aa11.55□□□□□ -0.56
SMC1A-205ENST00000469129 AOX1Q06278 1338 aa11.55□□□□□ -0.56
SMC1A-205ENST00000469129 NEURL1BA8MQ27 555 aa11.54□□□□□ -0.56
SMC1A-205ENST00000469129 SRGAP3O43295 1099 aa11.54□□□□□ -0.56
SMC1A-205ENST00000469129 PTCD1O75127 700 aaKnown RBP11.54□□□□□ -0.56
SMC1A-205ENST00000469129 CDC45O75419 566 aa11.54□□□□□ -0.56
SMC1A-205ENST00000469129 STARD3NLO95772 234 aa11.54□□□□□ -0.56
SMC1A-205ENST00000469129 NBPF7P0C2Y1 421 aaPredicted RBP11.54□□□□□ -0.56
SMC1A-205ENST00000469129 TTC22Q5TAA0 569 aa11.54□□□□□ -0.56
SMC1A-205ENST00000469129 PPP1R42Q7Z4L9 355 aa11.54□□□□□ -0.56
SMC1A-205ENST00000469129 ERC1Q8IUD2 1116 aa11.54□□□□□ -0.56
SMC1A-205ENST00000469129 PLEKHM2Q8IWE5 1019 aa11.54□□□□□ -0.56
SMC1A-205ENST00000469129 PIGBQ92521 554 aa11.54□□□□□ -0.56
SMC1A-205ENST00000469129 GCKRQ14397 625 aa11.53□□□□□ -0.56
SMC1A-205ENST00000469129 CWF19L2Q2TBE0 894 aaKnown RBP11.53□□□□□ -0.56
SMC1A-205ENST00000469129 CASC1Q6TDU7 716 aa11.53□□□□□ -0.56
SMC1A-205ENST00000469129 KIF1BPQ96EK5 621 aa11.53□□□□□ -0.56
SMC1A-205ENST00000469129 OSBPL3Q9H4L5 887 aa11.53□□□□□ -0.56
SMC1A-205ENST00000469129 EXOC6BQ9Y2D4 811 aa11.53□□□□□ -0.56
SMC1A-205ENST00000469129 NOP58Q9Y2X3 529 aaKnown RBP11.53□□□□□ -0.56
SMC1A-205ENST00000469129 APBB1O00213 710 aa11.52□□□□□ -0.57
SMC1A-205ENST00000469129 IGKV5-2P06315 115 aa11.52□□□□□ -0.57
SMC1A-205ENST00000469129 KIF6Q6ZMV9 814 aa11.52□□□□□ -0.57
SMC1A-205ENST00000469129 ATG3Q9NT62 314 aa11.52□□□□□ -0.57
SMC1A-205ENST00000469129 SCN7AQ01118 1682 aa11.52□□□□□ -0.57
SMC1A-205ENST00000469129 LY75O60449 1722 aa11.52□□□□□ -0.57
SMC1A-205ENST00000469129 TAF1LQ8IZX4 1826 aa11.51□□□□□ -0.57
SMC1A-205ENST00000469129 NBPF26B4DH59 902 aa11.51□□□□□ -0.57
SMC1A-205ENST00000469129 SMARCA5O60264 1052 aaPredicted RBP11.51□□□□□ -0.57
SMC1A-205ENST00000469129 SURF6O75683 361 aaKnown RBP11.51□□□□□ -0.57
SMC1A-205ENST00000469129 MX1P20591 662 aa11.51□□□□□ -0.57
SMC1A-205ENST00000469129 OS9Q13438 667 aaPredicted RBP11.51□□□□□ -0.57
SMC1A-205ENST00000469129 NBPF14Q5TI25 921 aa11.51□□□□□ -0.57
SMC1A-205ENST00000469129 NBPF10Q6P3W6 841 aaKnown RBP11.51□□□□□ -0.57
SMC1A-205ENST00000469129 NBPF15Q8N660 670 aa11.51□□□□□ -0.57
SMC1A-205ENST00000469129 TBC1D32Q96NH3 1257 aa11.51□□□□□ -0.57
SMC1A-205ENST00000469129 RBM42Q9BTD8 480 aaKnown RBP11.51□□□□□ -0.57
SMC1A-205ENST00000469129 DAXXQ9UER7 740 aaPredicted RBP11.51□□□□□ -0.57
SMC1A-205ENST00000469129 ASAP1Q9ULH1 1129 aa11.51□□□□□ -0.57
SMC1A-205ENST00000469129 CASZ1Q86V15 1759 aa11.51□□□□□ -0.57
SMC1A-205ENST00000469129 BRWD3Q6RI45 1802 aa11.51□□□□□ -0.57
SMC1A-205ENST00000469129 A0A0G2JS52 829 aa11.5□□□□□ -0.57
SMC1A-205ENST00000469129 MYT1Q01538 1121 aa11.5□□□□□ -0.57
SMC1A-205ENST00000469129 FAM98CQ17RN3 349 aaKnown RBP11.5□□□□□ -0.57
SMC1A-205ENST00000469129 SEPT12Q8IYM1 358 aa11.5□□□□□ -0.57
SMC1A-205ENST00000469129 UPF1Q92900 1129 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMC1A-205ENST00000469129 SMARCC1Q92922 1105 aaPredicted RBP11.5□□□□□ -0.57
SMC1A-205ENST00000469129 SYTL4Q96C24 671 aaPredicted RBP11.5□□□□□ -0.57
SMC1A-205ENST00000469129 SUCLG2Q96I99 432 aa11.5□□□□□ -0.57
SMC1A-205ENST00000469129 CWC25Q9NXE8 425 aaPredicted RBP11.5□□□□□ -0.57
SMC1A-205ENST00000469129 SALL3Q9BXA9 1300 aa11.5□□□□□ -0.57
SMC1A-205ENST00000469129 A1BGP04217 495 aa11.49□□□□□ -0.57
SMC1A-205ENST00000469129 GSPT1P15170 499 aaKnown RBP11.49□□□□□ -0.57
SMC1A-205ENST00000469129 PIP4K2AP48426 406 aaPredicted RBP11.49□□□□□ -0.57
SMC1A-205ENST00000469129 PDE1AP54750 535 aa11.49□□□□□ -0.57
SMC1A-205ENST00000469129 MFAP1P55081 439 aaKnown RBP11.49□□□□□ -0.57
SMC1A-205ENST00000469129 BECN1Q14457 450 aa11.49□□□□□ -0.57
SMC1A-205ENST00000469129 HSP90AB3PQ58FF7 597 aa11.49□□□□□ -0.57
SMC1A-205ENST00000469129 DNAJC10Q8IXB1 793 aa11.49□□□□□ -0.57
SMC1A-205ENST00000469129 CCDC191Q8NCU4 936 aa11.49□□□□□ -0.57
SMC1A-205ENST00000469129 RHPN1Q8TCX5 695 aa11.49□□□□□ -0.57
SMC1A-205ENST00000469129 GPATCH3Q96I76 525 aa11.49□□□□□ -0.57
SMC1A-205ENST00000469129 BICC1Q9H694 974 aaKnown RBP11.49□□□□□ -0.57
SMC1A-205ENST00000469129 STAP2Q9UGK3 403 aa11.49□□□□□ -0.57
SMC1A-205ENST00000469129 MYH14Q7Z406 1995 aaKnown RBP11.48□□□□□ -0.57
SMC1A-205ENST00000469129 ONECUT3O60422 494 aaPredicted RBP11.48□□□□□ -0.57
SMC1A-205ENST00000469129 PRIM1P49642 420 aaKnown RBP11.48□□□□□ -0.57
SMC1A-205ENST00000469129 MARCH10Q8NA82 808 aaPredicted RBP11.48□□□□□ -0.57
SMC1A-205ENST00000469129 SPEF2Q9C093 1822 aa11.47□□□□□ -0.57
SMC1A-205ENST00000469129 PALLDQ8WX93 1383 aa11.47□□□□□ -0.57
SMC1A-205ENST00000469129 TTC41PQ6P2S7 1318 aa11.47□□□□□ -0.57
SMC1A-205ENST00000469129 MAP3K15Q6ZN16 1313 aa11.47□□□□□ -0.57
SMC1A-205ENST00000469129 A0A087WZG4 1122 aa11.47□□□□□ -0.57
SMC1A-205ENST00000469129 MSH5O43196 834 aa11.47□□□□□ -0.57
SMC1A-205ENST00000469129 SEC24BO95487 1268 aa11.47□□□□□ -0.57
SMC1A-205ENST00000469129 CYP19A1P11511 503 aaPredicted RBP11.47□□□□□ -0.57
SMC1A-205ENST00000469129 G3BP1Q13283 466 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMC1A-205ENST00000469129 RABL6Q3YEC7 729 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms