RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 SPDYE3A6NKU9 549 aa8.54□□□□□ -1.04
SCFD1-205ENST00000469043 EML1O00423 815 aa8.54□□□□□ -1.04
SCFD1-205ENST00000469043 ATP1A2P50993 1020 aa8.54□□□□□ -1.04
SCFD1-205ENST00000469043 SYT9Q86SS6 491 aa8.54□□□□□ -1.04
SCFD1-205ENST00000469043 SLC9A9Q8IVB4 645 aa8.54□□□□□ -1.04
SCFD1-205ENST00000469043 PLVAPQ9BX97 442 aa8.54□□□□□ -1.04
SCFD1-205ENST00000469043 TNS4Q8IZW8 715 aa8.53□□□□□ -1.04
SCFD1-205ENST00000469043 SIN3BO75182 1162 aa8.52□□□□□ -1.05
SCFD1-205ENST00000469043 SPATA31C1P0DKV0 1188 aa8.52□□□□□ -1.05
SCFD1-205ENST00000469043 CHRNA4P43681 627 aa8.52□□□□□ -1.05
SCFD1-205ENST00000469043 EPHA4P54764 986 aa8.52□□□□□ -1.05
SCFD1-205ENST00000469043 NEUROD1Q13562 356 aa8.52□□□□□ -1.05
SCFD1-205ENST00000469043 TBCELQ5QJ74 424 aa8.52□□□□□ -1.05
SCFD1-205ENST00000469043 XP32Q5T750 250 aa8.52□□□□□ -1.05
SCFD1-205ENST00000469043 RHPN1Q8TCX5 695 aa8.52□□□□□ -1.05
SCFD1-205ENST00000469043 ANKIB1Q9P2G1 1089 aa8.52□□□□□ -1.05
SCFD1-205ENST00000469043 CCDC102BQ68D86 513 aa8.51□□□□□ -1.05
SCFD1-205ENST00000469043 TRIM11Q96F44 468 aa8.51□□□□□ -1.05
SCFD1-205ENST00000469043 ZBTB7BO15156 539 aaPredicted RBP8.5□□□□□ -1.05
SCFD1-205ENST00000469043 UBTFP17480 764 aaKnown RBP8.5□□□□□ -1.05
SCFD1-205ENST00000469043 GATA4P43694 442 aa8.5□□□□□ -1.05
SCFD1-205ENST00000469043 FLIIQ13045 1269 aa8.5□□□□□ -1.05
SCFD1-205ENST00000469043 PRRT3Q5FWE3 981 aa8.5□□□□□ -1.05
SCFD1-205ENST00000469043 C1orf53Q5VUE5 145 aa8.5□□□□□ -1.05
SCFD1-205ENST00000469043 PLEKHM2Q8IWE5 1019 aa8.5□□□□□ -1.05
SCFD1-205ENST00000469043 TPCN2Q8NHX9 752 aa8.5□□□□□ -1.05
SCFD1-205ENST00000469043 POM121Q96HA1 1249 aa8.5□□□□□ -1.05
SCFD1-205ENST00000469043 ADARB2-AS1A8MUL3 147 aa8.49□□□□□ -1.05
SCFD1-205ENST00000469043 PSMA6P60900 246 aaKnown RBP8.49□□□□□ -1.05
SCFD1-205ENST00000469043 SFSWAPQ12872 951 aaKnown RBP8.49□□□□□ -1.05
SCFD1-205ENST00000469043 C7orf43Q8WVR3 580 aa8.49□□□□□ -1.05
SCFD1-205ENST00000469043 RBM19Q9Y4C8 960 aaKnown RBP8.49□□□□□ -1.05
SCFD1-205ENST00000469043 APBA3O96018 575 aa8.48□□□□□ -1.05
SCFD1-205ENST00000469043 DOC2BQ14184 412 aa8.48□□□□□ -1.05
SCFD1-205ENST00000469043 HDGFL1Q5TGJ6 251 aa8.48□□□□□ -1.05
SCFD1-205ENST00000469043 LARGE2Q8N3Y3 721 aa8.48□□□□□ -1.05
SCFD1-205ENST00000469043 CEP63Q96MT8 703 aa8.48□□□□□ -1.05
SCFD1-205ENST00000469043 HCN4Q9Y3Q4 1203 aa8.48□□□□□ -1.05
SCFD1-205ENST00000469043 USP17L3A6NCW0 530 aa8.47□□□□□ -1.05
SCFD1-205ENST00000469043 USP17L4A6NCW7 530 aa8.47□□□□□ -1.05
SCFD1-205ENST00000469043 PALM3A6NDB9 673 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-205ENST00000469043 SPEM2Q0P670 501 aa8.47□□□□□ -1.05
SCFD1-205ENST00000469043 USP17L2Q6R6M4 530 aa8.47□□□□□ -1.05
SCFD1-205ENST00000469043 USP17L1Q7RTZ2 530 aa8.47□□□□□ -1.05
SCFD1-205ENST00000469043 TNFRSF25Q93038 417 aa8.47□□□□□ -1.05
SCFD1-205ENST00000469043 SEMA6BQ9H3T3 888 aa8.47□□□□□ -1.05
SCFD1-205ENST00000469043 M0R2N6 131 aa8.46□□□□□ -1.06
SCFD1-205ENST00000469043 ATP9BO43861 1147 aa8.46□□□□□ -1.06
SCFD1-205ENST00000469043 HIRAP54198 1017 aaPredicted RBP8.46□□□□□ -1.06
SCFD1-205ENST00000469043 CLDN10P78369 228 aa8.46□□□□□ -1.06
SCFD1-205ENST00000469043 SH3PXD2AQ5TCZ1 1133 aa8.46□□□□□ -1.06
SCFD1-205ENST00000469043 OGFOD1Q8N543 542 aa8.46□□□□□ -1.06
SCFD1-205ENST00000469043 SLC30A3Q99726 388 aa8.46□□□□□ -1.06
SCFD1-205ENST00000469043 MDFIQ99750 246 aa8.46□□□□□ -1.06
SCFD1-205ENST00000469043 TSPAN10Q9H1Z9 355 aaPredicted RBP8.46□□□□□ -1.06
SCFD1-205ENST00000469043 BRD7Q9NPI1 651 aa8.46□□□□□ -1.06
SCFD1-205ENST00000469043 MKRN1Q9UHC7 482 aaKnown RBP8.46□□□□□ -1.06
SCFD1-205ENST00000469043 KIAA1024Q9UPX6 916 aa8.46□□□□□ -1.06
SCFD1-205ENST00000469043 POM121CA8CG34 1229 aa8.45□□□□□ -1.06
SCFD1-205ENST00000469043 SFI1A8K8P3 1242 aa8.45□□□□□ -1.06
SCFD1-205ENST00000469043 M0R082 166 aa8.45□□□□□ -1.06
SCFD1-205ENST00000469043 TRIM28Q13263 835 aaKnown RBP8.45□□□□□ -1.06
SCFD1-205ENST00000469043 Q8N3U1 123 aa8.45□□□□□ -1.06
SCFD1-205ENST00000469043 ZNF417Q8TAU3 575 aa8.45□□□□□ -1.06
SCFD1-205ENST00000469043 ZNF587Q96SQ5 575 aaPredicted RBP8.45□□□□□ -1.06
SCFD1-205ENST00000469043 PHACTR1Q9C0D0 580 aa8.45□□□□□ -1.06
SCFD1-205ENST00000469043 PRDM6Q9NQX0 595 aa8.45□□□□□ -1.06
SCFD1-205ENST00000469043 KCNH4Q9UQ05 1017 aa8.45□□□□□ -1.06
SCFD1-205ENST00000469043 TMEM132AQ24JP5 1023 aa8.44□□□□□ -1.06
SCFD1-205ENST00000469043 PPP1R12BO60237 982 aaPredicted RBP8.43□□□□□ -1.06
SCFD1-205ENST00000469043 ADH7P40394 386 aa8.43□□□□□ -1.06
SCFD1-205ENST00000469043 KCNQ4P56696 695 aa8.43□□□□□ -1.06
SCFD1-205ENST00000469043 HIF1AQ16665 826 aa8.43□□□□□ -1.06
SCFD1-205ENST00000469043 MICALL1Q8N3F8 863 aa8.43□□□□□ -1.06
SCFD1-205ENST00000469043 ADAMTS19Q8TE59 1207 aa8.43□□□□□ -1.06
SCFD1-205ENST00000469043 SUSD3Q96L08 255 aa8.43□□□□□ -1.06
SCFD1-205ENST00000469043 NACC1Q96RE7 527 aa8.43□□□□□ -1.06
SCFD1-205ENST00000469043 POTEAQ6S8J7 498 aa8.42□□□□□ -1.06
SCFD1-205ENST00000469043 SIX5Q8N196 739 aa8.42□□□□□ -1.06
SCFD1-205ENST00000469043 HSH2DQ96JZ2 352 aa8.42□□□□□ -1.06
SCFD1-205ENST00000469043 STARD13Q9Y3M8 1113 aa8.42□□□□□ -1.06
SCFD1-205ENST00000469043 RAB44Q7Z6P3 723 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-205ENST00000469043 TSEN2Q8NCE0 465 aaKnown RBP8.41□□□□□ -1.06
SCFD1-205ENST00000469043 GAS2L2Q8NHY3 880 aa8.41□□□□□ -1.06
SCFD1-205ENST00000469043 UCN2Q96RP3 112 aa8.41□□□□□ -1.06
SCFD1-205ENST00000469043 ATAD2Q6PL18 1390 aa8.4□□□□□ -1.06
SCFD1-205ENST00000469043 ALBP02768 609 aa8.4□□□□□ -1.06
SCFD1-205ENST00000469043 TYRO3Q06418 890 aa8.4□□□□□ -1.06
SCFD1-205ENST00000469043 C14orf37Q86TY3 774 aa8.4□□□□□ -1.06
SCFD1-205ENST00000469043 ALDH16A1Q8IZ83 802 aa8.4□□□□□ -1.06
SCFD1-205ENST00000469043 STAG2Q8N3U4 1231 aa8.4□□□□□ -1.06
SCFD1-205ENST00000469043 ZNF280CQ8ND82 737 aa8.4□□□□□ -1.06
SCFD1-205ENST00000469043 BHMTQ93088 406 aa8.4□□□□□ -1.06
SCFD1-205ENST00000469043 ZNF594Q96JF6 807 aaPredicted RBP8.4□□□□□ -1.06
SCFD1-205ENST00000469043 EFCC1Q9HA90 598 aa8.4□□□□□ -1.06
SCFD1-205ENST00000469043 LILRB5O75023 590 aa8.39□□□□□ -1.07
SCFD1-205ENST00000469043 COL9A3Q14050 684 aaPredicted RBP8.39□□□□□ -1.07
SCFD1-205ENST00000469043 TRAPPC3LQ5T215 181 aa8.39□□□□□ -1.07
SCFD1-205ENST00000469043 C8orf86Q6ZUL3 223 aa8.39□□□□□ -1.07
SCFD1-205ENST00000469043 FAM229AH3BQW9 127 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms