RNA–Protein interactions for RNA: ENST00000468937.2

SYNE1-218, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 2

Gene SYNE1, Length 688 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-218ENST00000468937 FGFR3P22607 806 aa10.52□□□□□ -0.73
SYNE1-218ENST00000468937 SVOPQ8N4V2 548 aa10.52□□□□□ -0.73
SYNE1-218ENST00000468937 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.52□□□□□ -0.73
SYNE1-218ENST00000468937 FOXO3O43524 673 aa10.51□□□□□ -0.73
SYNE1-218ENST00000468937 FAM157BP0CG42 384 aa10.51□□□□□ -0.73
SYNE1-218ENST00000468937 WEE1P30291 646 aa10.51□□□□□ -0.73
SYNE1-218ENST00000468937 MAP3K10Q02779 954 aa10.51□□□□□ -0.73
SYNE1-218ENST00000468937 ALDH16A1Q8IZ83 802 aa10.51□□□□□ -0.73
SYNE1-218ENST00000468937 VTI1AQ96AJ9 217 aa10.51□□□□□ -0.73
SYNE1-218ENST00000468937 KHNYNO15037 678 aaKnown RBP10.5□□□□□ -0.73
SYNE1-218ENST00000468937 PPP1R15AO75807 674 aaPredicted RBP10.5□□□□□ -0.73
SYNE1-218ENST00000468937 BMP4P12644 408 aa10.5□□□□□ -0.73
SYNE1-218ENST00000468937 LRRC69Q6ZNQ3 347 aa10.5□□□□□ -0.73
SYNE1-218ENST00000468937 C7orf43Q8WVR3 580 aa10.5□□□□□ -0.73
SYNE1-218ENST00000468937 ZMIZ1Q9ULJ6 1067 aa10.5□□□□□ -0.73
SYNE1-218ENST00000468937 DCDC2BA2VCK2 349 aa10.49□□□□□ -0.73
SYNE1-218ENST00000468937 LGR5O75473 907 aa10.49□□□□□ -0.73
SYNE1-218ENST00000468937 MAPTP10636 758 aaKnown RBP10.49□□□□□ -0.73
SYNE1-218ENST00000468937 TNP2Q05952 138 aa10.49□□□□□ -0.73
SYNE1-218ENST00000468937 LAMC2Q13753 1193 aa10.49□□□□□ -0.73
SYNE1-218ENST00000468937 ZNF385CQ66K41 422 aaPredicted RBP10.49□□□□□ -0.73
SYNE1-218ENST00000468937 C1orf115Q9H7X2 142 aa10.49□□□□□ -0.73
SYNE1-218ENST00000468937 ENAMQ9NRM1 1142 aa10.49□□□□□ -0.73
SYNE1-218ENST00000468937 NGLY1Q96IV0 654 aa10.48□□□□□ -0.73
SYNE1-218ENST00000468937 RTN1Q16799 776 aa10.47□□□□□ -0.73
SYNE1-218ENST00000468937 FAM182BQ5T319 152 aa10.47□□□□□ -0.73
SYNE1-218ENST00000468937 LYPD4Q6UWN0 246 aa10.47□□□□□ -0.73
SYNE1-218ENST00000468937 STK32AQ8WU08 396 aa10.47□□□□□ -0.73
SYNE1-218ENST00000468937 OXCT2Q9BYC2 517 aaPredicted RBP10.47□□□□□ -0.73
SYNE1-218ENST00000468937 LRRC4BQ9NT99 713 aa10.47□□□□□ -0.73
SYNE1-218ENST00000468937 GDF2Q9UK05 429 aaPredicted RBP10.47□□□□□ -0.73
SYNE1-218ENST00000468937 CELA2BP08218 269 aaPredicted RBP10.46□□□□□ -0.73
SYNE1-218ENST00000468937 CTBSQ01459 385 aa10.46□□□□□ -0.73
SYNE1-218ENST00000468937 WHAMMQ8TF30 809 aa10.46□□□□□ -0.73
SYNE1-218ENST00000468937 KLRG1Q96E93 195 aa10.46□□□□□ -0.73
SYNE1-218ENST00000468937 SUSD3Q96L08 255 aa10.46□□□□□ -0.73
SYNE1-218ENST00000468937 MARK1Q9P0L2 795 aa10.46□□□□□ -0.73
SYNE1-218ENST00000468937 BCRP11274 1271 aa10.45□□□□□ -0.74
SYNE1-218ENST00000468937 EFSO43281 561 aa10.44□□□□□ -0.74
SYNE1-218ENST00000468937 FAM69CQ0P6D2 419 aa10.44□□□□□ -0.74
SYNE1-218ENST00000468937 TMEM164Q5U3C3 297 aa10.44□□□□□ -0.74
SYNE1-218ENST00000468937 GOLGA6L1Q8N7Z2 621 aa10.44□□□□□ -0.74
SYNE1-218ENST00000468937 ACDQ96AP0 544 aa10.44□□□□□ -0.74
SYNE1-218ENST00000468937 CEP63Q96MT8 703 aa10.44□□□□□ -0.74
SYNE1-218ENST00000468937 PRMT3O60678 531 aa10.43□□□□□ -0.74
SYNE1-218ENST00000468937 CD33P20138 364 aa10.43□□□□□ -0.74
SYNE1-218ENST00000468937 HSH2DQ96JZ2 352 aa10.43□□□□□ -0.74
SYNE1-218ENST00000468937 PRIMPOLQ96LW4 560 aa10.43□□□□□ -0.74
SYNE1-218ENST00000468937 C2CD2LO14523 706 aa10.42□□□□□ -0.74
SYNE1-218ENST00000468937 ARHGEF15O94989 841 aa10.42□□□□□ -0.74
SYNE1-218ENST00000468937 ARAFP10398 606 aa10.42□□□□□ -0.74
SYNE1-218ENST00000468937 AVENQ9NQS1 362 aaPredicted RBP10.42□□□□□ -0.74
SYNE1-218ENST00000468937 TIMELESSQ9UNS1 1208 aa10.42□□□□□ -0.74
SYNE1-218ENST00000468937 ADAMTS8Q9UP79 889 aa10.42□□□□□ -0.74
SYNE1-218ENST00000468937 IER5Q5VY09 327 aa10.41□□□□□ -0.74
SYNE1-218ENST00000468937 ZNF280CQ8ND82 737 aa10.41□□□□□ -0.74
SYNE1-218ENST00000468937 CLP1Q92989 425 aaKnown RBP10.41□□□□□ -0.74
SYNE1-218ENST00000468937 BRD7Q9NPI1 651 aa10.41□□□□□ -0.74
SYNE1-218ENST00000468937 PRR12Q9ULL5 1215 aa10.41□□□□□ -0.74
SYNE1-218ENST00000468937 OIP5O43482 229 aa10.4□□□□□ -0.74
SYNE1-218ENST00000468937 MARSP56192 900 aaKnown RBP10.4□□□□□ -0.74
SYNE1-218ENST00000468937 FKBP5Q13451 457 aaPredicted RBP10.4□□□□□ -0.74
SYNE1-218ENST00000468937 OCLNQ16625 522 aa10.4□□□□□ -0.74
SYNE1-218ENST00000468937 NEDD1Q8NHV4 660 aa10.4□□□□□ -0.74
SYNE1-218ENST00000468937 MYO19Q96H55 970 aa10.4□□□□□ -0.74
SYNE1-218ENST00000468937 TGFBR3LH3BV60 316 aa10.39□□□□□ -0.75
SYNE1-218ENST00000468937 SUPT5HO00267 1087 aaKnown RBP10.39□□□□□ -0.75
SYNE1-218ENST00000468937 BTLAQ7Z6A9 289 aa10.39□□□□□ -0.75
SYNE1-218ENST00000468937 COL26A1Q96A83 441 aa10.39□□□□□ -0.75
SYNE1-218ENST00000468937 CXXC1Q9P0U4 656 aaPredicted RBP10.39□□□□□ -0.75
SYNE1-218ENST00000468937 PTCD1O75127 700 aaKnown RBP10.38□□□□□ -0.75
SYNE1-218ENST00000468937 ADH6P28332 368 aa10.38□□□□□ -0.75
SYNE1-218ENST00000468937 KCNQ4P56696 695 aa10.38□□□□□ -0.75
SYNE1-218ENST00000468937 TYRO3Q06418 890 aa10.38□□□□□ -0.75
SYNE1-218ENST00000468937 NEUROD1Q13562 356 aa10.38□□□□□ -0.75
SYNE1-218ENST00000468937 C11orf91Q3C1V1 193 aa10.38□□□□□ -0.75
SYNE1-218ENST00000468937 SLCO4C1Q6ZQN7 724 aa10.38□□□□□ -0.75
SYNE1-218ENST00000468937 GALNT6Q8NCL4 622 aa10.38□□□□□ -0.75
SYNE1-218ENST00000468937 QTRT2Q9H974 415 aaKnown RBP10.38□□□□□ -0.75
SYNE1-218ENST00000468937 STRN4Q9NRL3 753 aa10.38□□□□□ -0.75
SYNE1-218ENST00000468937 GGA1Q9UJY5 639 aa10.38□□□□□ -0.75
SYNE1-218ENST00000468937 KCNH4Q9UQ05 1017 aa10.38□□□□□ -0.75
SYNE1-218ENST00000468937 SFSWAPQ12872 951 aaKnown RBP10.37□□□□□ -0.75
SYNE1-218ENST00000468937 DGKZQ13574 1117 aa10.37□□□□□ -0.75
SYNE1-218ENST00000468937 ZNF468Q5VIY5 522 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-218ENST00000468937 EDARADDQ8WWZ3 215 aa10.37□□□□□ -0.75
SYNE1-218ENST00000468937 HCN2Q9UL51 889 aa10.37□□□□□ -0.75
SYNE1-218ENST00000468937 DNMT3AQ9Y6K1 912 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-218ENST00000468937 RNF225M0QZC1 329 aaPredicted RBP10.36□□□□□ -0.75
SYNE1-218ENST00000468937 SCARF2Q96GP6 870 aaPredicted RBP10.36□□□□□ -0.75
SYNE1-218ENST00000468937 KLK14Q9P0G3 267 aa10.36□□□□□ -0.75
SYNE1-218ENST00000468937 NEURL1BA8MQ27 555 aa10.35□□□□□ -0.75
SYNE1-218ENST00000468937 EPB42P16452 691 aa10.35□□□□□ -0.75
SYNE1-218ENST00000468937 ATP2B4P23634 1241 aa10.34□□□□□ -0.75
SYNE1-218ENST00000468937 SPEM2Q0P670 501 aa10.34□□□□□ -0.75
SYNE1-218ENST00000468937 EPXP11678 715 aa10.33□□□□□ -0.76
SYNE1-218ENST00000468937 C16orf46Q6P387 395 aa10.33□□□□□ -0.76
SYNE1-218ENST00000468937 PODNQ7Z5L7 613 aa10.33□□□□□ -0.76
SYNE1-218ENST00000468937 IFT43Q96FT9 208 aa10.33□□□□□ -0.76
SYNE1-218ENST00000468937 ARID3AQ99856 593 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms