RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 PROM2Q8N271 834 aa22.2■■□□□ 1.14
RPL39-202ENST00000468844 DNAAF4Q8WXU2 420 aa22.2■■□□□ 1.14
RPL39-202ENST00000468844 SLC27A3Q5K4L6 730 aa22.19■■□□□ 1.14
RPL39-202ENST00000468844 MAP3K2Q9Y2U5 619 aa22.19■■□□□ 1.14
RPL39-202ENST00000468844 EIF5P55010 431 aaKnown RBP22.19■■□□□ 1.14
RPL39-202ENST00000468844 TXNRD1Q16881 649 aa22.19■■□□□ 1.14
RPL39-202ENST00000468844 ERICH6BQ5W0A0 696 aa22.19■■□□□ 1.14
RPL39-202ENST00000468844 ANKRD13DQ6ZTN6 518 aa22.19■■□□□ 1.14
RPL39-202ENST00000468844 ATP10DQ9P241 1426 aa22.18■■□□□ 1.14
RPL39-202ENST00000468844 DDX19BQ9UMR2 479 aa22.18■■□□□ 1.14
RPL39-202ENST00000468844 RC3H1Q5TC82 1133 aaKnown RBP22.17■■□□□ 1.14
RPL39-202ENST00000468844 RIC3Q7Z5B4 369 aa22.17■■□□□ 1.14
RPL39-202ENST00000468844 SCN7AQ01118 1682 aa22.17■■□□□ 1.14
RPL39-202ENST00000468844 PLBD2Q8NHP8 589 aa22.16■■□□□ 1.14
RPL39-202ENST00000468844 COL15A1P39059 1388 aa22.16■■□□□ 1.14
RPL39-202ENST00000468844 CCT4P50991 539 aaKnown RBP22.16■■□□□ 1.14
RPL39-202ENST00000468844 BEND3Q5T5X7 828 aa22.15■■□□□ 1.14
RPL39-202ENST00000468844 ZBTB3Q9H5J0 574 aa22.15■■□□□ 1.14
RPL39-202ENST00000468844 ZBTB7BO15156 539 aaPredicted RBP22.14■■□□□ 1.13
RPL39-202ENST00000468844 GNPATO15228 680 aa22.13■■□□□ 1.13
RPL39-202ENST00000468844 KIF6Q6ZMV9 814 aa22.13■■□□□ 1.13
RPL39-202ENST00000468844 NPM2Q86SE8 214 aaKnown RBP22.13■■□□□ 1.13
RPL39-202ENST00000468844 AMIGO3Q86WK7 504 aa22.13■■□□□ 1.13
RPL39-202ENST00000468844 METTL22Q9BUU2 404 aaPredicted RBP22.13■■□□□ 1.13
RPL39-202ENST00000468844 SRCIN1Q9C0H9 1055 aa22.13■■□□□ 1.13
RPL39-202ENST00000468844 MAP3K15Q6ZN16 1313 aa22.12■■□□□ 1.13
RPL39-202ENST00000468844 DZIP3Q86Y13 1208 aaKnown RBP22.12■■□□□ 1.13
RPL39-202ENST00000468844 TBC1D2BQ9UPU7 963 aa22.12■■□□□ 1.13
RPL39-202ENST00000468844 ARXQ96QS3 562 aa22.12■■□□□ 1.13
RPL39-202ENST00000468844 RPS6KA4O75676 772 aa22.11■■□□□ 1.13
RPL39-202ENST00000468844 IGKV5-2P06315 115 aa22.11■■□□□ 1.13
RPL39-202ENST00000468844 EN1Q05925 392 aaPredicted RBP22.11■■□□□ 1.13
RPL39-202ENST00000468844 CWF19L2Q2TBE0 894 aaKnown RBP22.11■■□□□ 1.13
RPL39-202ENST00000468844 SMIM5Q71RC9 77 aa22.11■■□□□ 1.13
RPL39-202ENST00000468844 MYD88Q99836 296 aa22.11■■□□□ 1.13
RPL39-202ENST00000468844 LINS1Q8NG48 757 aa22.1■■□□□ 1.13
RPL39-202ENST00000468844 CAMKK2Q96RR4 588 aa22.1■■□□□ 1.13
RPL39-202ENST00000468844 ZBTB40Q9NUA8 1239 aa22.1■■□□□ 1.13
RPL39-202ENST00000468844 NEXNQ0ZGT2 675 aa22.1■■□□□ 1.13
RPL39-202ENST00000468844 AK7Q96M32 723 aa22.1■■□□□ 1.13
RPL39-202ENST00000468844 MEIS3Q99687 375 aa22.1■■□□□ 1.13
RPL39-202ENST00000468844 EZH2Q15910 746 aaKnown RBP22.09■■□□□ 1.13
RPL39-202ENST00000468844 HLFQ16534 295 aa22.09■■□□□ 1.13
RPL39-202ENST00000468844 RTCBQ9Y3I0 505 aaKnown RBP22.09■■□□□ 1.13
RPL39-202ENST00000468844 GIGYF2Q6Y7W6 1299 aaKnown RBP22.08■■□□□ 1.13
RPL39-202ENST00000468844 QSER1Q2KHR3 1735 aa22.08■■□□□ 1.13
RPL39-202ENST00000468844 NEURL1BA8MQ27 555 aa22.08■■□□□ 1.12
RPL39-202ENST00000468844 SF3B2Q13435 895 aaKnown RBP22.08■■□□□ 1.12
RPL39-202ENST00000468844 AAMPQ13685 434 aa22.08■■□□□ 1.12
RPL39-202ENST00000468844 PPP4R2Q9NY27 417 aa22.08■■□□□ 1.12
RPL39-202ENST00000468844 ERVV-1B6SEH8 477 aa22.07■■□□□ 1.12
RPL39-202ENST00000468844 ATP5J2-PTCD1G3V325 749 aa22.07■■□□□ 1.12
RPL39-202ENST00000468844 ALDH1L1O75891 902 aa22.07■■□□□ 1.12
RPL39-202ENST00000468844 CAMTA2O94983 1202 aa22.07■■□□□ 1.12
RPL39-202ENST00000468844 USP44Q9H0E7 712 aa22.07■■□□□ 1.12
RPL39-202ENST00000468844 DEFB132Q7Z7B7 95 aa22.06■■□□□ 1.12
RPL39-202ENST00000468844 MYH3P11055 1940 aa22.06■■□□□ 1.12
RPL39-202ENST00000468844 IBTKQ9P2D0 1353 aaPredicted RBP22.06■■□□□ 1.12
RPL39-202ENST00000468844 A0A087WZG4 1122 aa22.06■■□□□ 1.12
RPL39-202ENST00000468844 HMGB2P26583 209 aaKnown RBP22.06■■□□□ 1.12
RPL39-202ENST00000468844 BAG6P46379 1132 aa22.06■■□□□ 1.12
RPL39-202ENST00000468844 CHMP4BQ9H444 224 aaKnown RBP22.06■■□□□ 1.12
RPL39-202ENST00000468844 TCIRG1Q13488 830 aa22.05■■□□□ 1.12
RPL39-202ENST00000468844 ZNF827Q17R98 1081 aa22.05■■□□□ 1.12
RPL39-202ENST00000468844 C1orf115Q9H7X2 142 aa22.05■■□□□ 1.12
RPL39-202ENST00000468844 PHF14O94880 888 aa22.04■■□□□ 1.12
RPL39-202ENST00000468844 ARHGEF1Q92888 912 aaKnown RBP22.04■■□□□ 1.12
RPL39-202ENST00000468844 AKT1S1Q96B36 256 aa22.04■■□□□ 1.12
RPL39-202ENST00000468844 CASZ1Q86V15 1759 aa22.04■■□□□ 1.12
RPL39-202ENST00000468844 NBPF7P0C2Y1 421 aaPredicted RBP22.04■■□□□ 1.12
RPL39-202ENST00000468844 GCKRQ14397 625 aa22.04■■□□□ 1.12
RPL39-202ENST00000468844 ISCA1Q9BUE6 129 aa22.04■■□□□ 1.12
RPL39-202ENST00000468844 PCDHB15Q9Y5E8 787 aa22.04■■□□□ 1.12
RPL39-202ENST00000468844 COL24A1Q17RW2 1714 aa22.03■■□□□ 1.12
RPL39-202ENST00000468844 B4GALNT3Q6L9W6 998 aa22.03■■□□□ 1.12
RPL39-202ENST00000468844 CCDC125Q86Z20 511 aa22.03■■□□□ 1.12
RPL39-202ENST00000468844 NARFQ9UHQ1 456 aa22.03■■□□□ 1.12
RPL39-202ENST00000468844 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.02■■□□□ 1.12
RPL39-202ENST00000468844 SSFA2P28290 1259 aa22.02■■□□□ 1.12
RPL39-202ENST00000468844 HSP90AB3PQ58FF7 597 aa22.02■■□□□ 1.12
RPL39-202ENST00000468844 TRAPPC3LQ5T215 181 aa22.02■■□□□ 1.12
RPL39-202ENST00000468844 GNAI3P08754 354 aa22.02■■□□□ 1.11
RPL39-202ENST00000468844 ADRA2BP18089 450 aa22.02■■□□□ 1.11
RPL39-202ENST00000468844 C9orf78Q9NZ63 289 aaPredicted RBP22.02■■□□□ 1.11
RPL39-202ENST00000468844 GRM8O00222 908 aa22.01■■□□□ 1.11
RPL39-202ENST00000468844 CCDC191Q8NCU4 936 aa22.01■■□□□ 1.11
RPL39-202ENST00000468844 SRP68Q9UHB9 627 aaKnown RBP22.01■■□□□ 1.11
RPL39-202ENST00000468844 TRIM28Q13263 835 aaKnown RBP22■■□□□ 1.11
RPL39-202ENST00000468844 USPL1Q5W0Q7 1092 aa22■■□□□ 1.11
RPL39-202ENST00000468844 CCDC136Q96JN2 1154 aa22■■□□□ 1.11
RPL39-202ENST00000468844 BCL2L12Q9HB09 334 aa22■■□□□ 1.11
RPL39-202ENST00000468844 UTYO14607 1347 aa22■■□□□ 1.11
RPL39-202ENST00000468844 USP42Q9H9J4 1324 aaKnown RBP22■■□□□ 1.11
RPL39-202ENST00000468844 UBTFL1P0CB47 393 aaPredicted RBP22■■□□□ 1.11
RPL39-202ENST00000468844 GPTP24298 496 aa22■■□□□ 1.11
RPL39-202ENST00000468844 CLEC4GQ6UXB4 293 aa22■■□□□ 1.11
RPL39-202ENST00000468844 ANO8Q9HCE9 1232 aaPredicted RBP22■■□□□ 1.11
RPL39-202ENST00000468844 CWC25Q9NXE8 425 aaPredicted RBP22■■□□□ 1.11
RPL39-202ENST00000468844 UBN2Q6ZU65 1347 aa21.99■■□□□ 1.11
RPL39-202ENST00000468844 LAMB2P55268 1798 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms