RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 PRAMEF22A3QJZ6 481 aa20.85■□□□□ 0.93
SRRM1-207ENST00000468822 CNGB1Q14028 1251 aaPredicted RBP20.85■□□□□ 0.93
SRRM1-207ENST00000468822 STYK1Q6J9G0 422 aa20.85■□□□□ 0.93
SRRM1-207ENST00000468822 POTEDQ86YR6 584 aa20.85■□□□□ 0.93
SRRM1-207ENST00000468822 C7orf43Q8WVR3 580 aa20.85■□□□□ 0.93
SRRM1-207ENST00000468822 PHACTR3Q96KR7 559 aa20.85■□□□□ 0.93
SRRM1-207ENST00000468822 FMNL2Q96PY5 1086 aa20.85■□□□□ 0.93
SRRM1-207ENST00000468822 CACNA1SQ13698 1873 aa20.85■□□□□ 0.93
SRRM1-207ENST00000468822 BCORQ6W2J9 1755 aa20.85■□□□□ 0.93
SRRM1-207ENST00000468822 GAS2L2Q8NHY3 880 aa20.84■□□□□ 0.93
SRRM1-207ENST00000468822 CNKSR1Q969H4 720 aa20.84■□□□□ 0.93
SRRM1-207ENST00000468822 CREBZFQ9NS37 354 aa20.84■□□□□ 0.93
SRRM1-207ENST00000468822 USP16Q9Y5T5 823 aa20.84■□□□□ 0.93
SRRM1-207ENST00000468822 DZIP3Q86Y13 1208 aaKnown RBP20.83■□□□□ 0.93
SRRM1-207ENST00000468822 ARFGEF2Q9Y6D5 1785 aa20.82■□□□□ 0.92
SRRM1-207ENST00000468822 OLFM4Q6UX06 510 aa20.82■□□□□ 0.92
SRRM1-207ENST00000468822 MASTLQ96GX5 879 aa20.82■□□□□ 0.92
SRRM1-207ENST00000468822 BTBD11A6QL63 1104 aa20.81■□□□□ 0.92
SRRM1-207ENST00000468822 ST5P78524 1137 aa20.81■□□□□ 0.92
SRRM1-207ENST00000468822 PASKQ96RG2 1323 aa20.8■□□□□ 0.92
SRRM1-207ENST00000468822 NPHP1O15259 732 aa20.79■□□□□ 0.92
SRRM1-207ENST00000468822 FOXN1O15353 648 aa20.79■□□□□ 0.92
SRRM1-207ENST00000468822 CCER1Q8TC90 406 aaPredicted RBP20.79■□□□□ 0.92
SRRM1-207ENST00000468822 L3MBTL3Q96JM7 780 aaPredicted RBP20.79■□□□□ 0.92
SRRM1-207ENST00000468822 RSPH6AQ9H0K4 717 aa20.79■□□□□ 0.92
SRRM1-207ENST00000468822 TAF1DQ9H5J8 278 aaPredicted RBP20.79■□□□□ 0.92
SRRM1-207ENST00000468822 CNTNAP1P78357 1384 aa20.79■□□□□ 0.92
SRRM1-207ENST00000468822 ZNF541Q9H0D2 1346 aa20.78■□□□□ 0.92
SRRM1-207ENST00000468822 NPC1L1Q9UHC9 1359 aa20.78■□□□□ 0.92
SRRM1-207ENST00000468822 PRKAR2BP31323 418 aa20.78■□□□□ 0.92
SRRM1-207ENST00000468822 NBPF5PQ86XG9 351 aaPredicted RBP20.78■□□□□ 0.92
SRRM1-207ENST00000468822 KLRG2A4D1S0 409 aaPredicted RBP20.77■□□□□ 0.92
SRRM1-207ENST00000468822 NBPF26B4DH59 902 aa20.77■□□□□ 0.92
SRRM1-207ENST00000468822 ITGBL1O95965 494 aaPredicted RBP20.77■□□□□ 0.92
SRRM1-207ENST00000468822 SOGA3Q5TF21 947 aa20.77■□□□□ 0.92
SRRM1-207ENST00000468822 NBPF10Q6P3W6 841 aaKnown RBP20.77■□□□□ 0.92
SRRM1-207ENST00000468822 LDHDQ86WU2 507 aa20.77■□□□□ 0.92
SRRM1-207ENST00000468822 NBPF15Q8N660 670 aa20.77■□□□□ 0.92
SRRM1-207ENST00000468822 ZNF277Q9NRM2 450 aaPredicted RBP20.77■□□□□ 0.92
SRRM1-207ENST00000468822 CCDC93Q567U6 631 aa20.76■□□□□ 0.91
SRRM1-207ENST00000468822 NPM2Q86SE8 214 aaKnown RBP20.76■□□□□ 0.91
SRRM1-207ENST00000468822 NPR1P16066 1061 aa20.75■□□□□ 0.91
SRRM1-207ENST00000468822 CLEC4GQ6UXB4 293 aa20.75■□□□□ 0.91
SRRM1-207ENST00000468822 MCM10Q7L590 875 aa20.75■□□□□ 0.91
SRRM1-207ENST00000468822 SCN4AP35499 1836 aa20.75■□□□□ 0.91
SRRM1-207ENST00000468822 IQCA1LA6NCM1 817 aa20.74■□□□□ 0.91
SRRM1-207ENST00000468822 VEGFBP49765 207 aa20.74■□□□□ 0.91
SRRM1-207ENST00000468822 FKBP4Q02790 459 aaKnown RBP eCLIP20.74■□□□□ 0.91
SRRM1-207ENST00000468822 ADAMTSL1Q8N6G6 1762 aa20.73■□□□□ 0.91
SRRM1-207ENST00000468822 FAM177BA6PVY3 158 aa20.73■□□□□ 0.91
SRRM1-207ENST00000468822 SNRPA1P09661 255 aaKnown RBP20.72■□□□□ 0.91
SRRM1-207ENST00000468822 DCTN1Q14203 1278 aa20.72■□□□□ 0.91
SRRM1-207ENST00000468822 HLFQ16534 295 aa20.72■□□□□ 0.91
SRRM1-207ENST00000468822 EAPPQ56P03 285 aaPredicted RBP20.72■□□□□ 0.91
SRRM1-207ENST00000468822 NIP7Q9Y221 180 aaKnown RBP eCLIP20.72■□□□□ 0.91
SRRM1-207ENST00000468822 SNED1Q8TER0 1413 aa20.71■□□□□ 0.91
SRRM1-207ENST00000468822 TMEM88BA6NKF7 163 aa20.71■□□□□ 0.91
SRRM1-207ENST00000468822 TPTE2Q6XPS3 522 aa20.7■□□□□ 0.9
SRRM1-207ENST00000468822 SLC51AQ86UW1 340 aa20.7■□□□□ 0.9
SRRM1-207ENST00000468822 HACL1Q9UJ83 578 aa20.7■□□□□ 0.9
SRRM1-207ENST00000468822 ZNF652Q9Y2D9 606 aa20.7■□□□□ 0.9
SRRM1-207ENST00000468822 RNF123Q5XPI4 1314 aa20.7■□□□□ 0.9
SRRM1-207ENST00000468822 COL4A5P29400 1685 aa20.7■□□□□ 0.9
SRRM1-207ENST00000468822 FZD9O00144 591 aa20.69■□□□□ 0.9
SRRM1-207ENST00000468822 EPHX2P34913 555 aa20.69■□□□□ 0.9
SRRM1-207ENST00000468822 PRDM10Q9NQV6 1147 aa20.69■□□□□ 0.9
SRRM1-207ENST00000468822 IARSP41252 1262 aaKnown RBP20.68■□□□□ 0.9
SRRM1-207ENST00000468822 MAP1SQ66K74 1059 aaPredicted RBP20.68■□□□□ 0.9
SRRM1-207ENST00000468822 RTKN2Q8IZC4 609 aa20.68■□□□□ 0.9
SRRM1-207ENST00000468822 SYNE4Q8N205 404 aa20.68■□□□□ 0.9
SRRM1-207ENST00000468822 WBP1LQ9NX94 342 aa20.68■□□□□ 0.9
SRRM1-207ENST00000468822 ABCC12Q96J65 1359 aa20.68■□□□□ 0.9
SRRM1-207ENST00000468822 MIS18AQ9NYP9 233 aa20.67■□□□□ 0.9
SRRM1-207ENST00000468822 CLEC11AQ9Y240 323 aa20.67■□□□□ 0.9
SRRM1-207ENST00000468822 RGL2O15211 777 aa20.66■□□□□ 0.9
SRRM1-207ENST00000468822 U2AF1L5P0DN76 240 aaPredicted RBP20.66■□□□□ 0.9
SRRM1-207ENST00000468822 CTCFP49711 727 aaPredicted RBP20.66■□□□□ 0.9
SRRM1-207ENST00000468822 U2AF1Q01081 240 aaKnown RBP eCLIP20.66■□□□□ 0.91e-12■■□□□ 14.4
SRRM1-207ENST00000468822 CNTROBQ8N137 903 aa20.66■□□□□ 0.9
SRRM1-207ENST00000468822 CRY2Q49AN0 593 aa20.65■□□□□ 0.9
SRRM1-207ENST00000468822 NUTM1Q86Y26 1132 aa20.65■□□□□ 0.9
SRRM1-207ENST00000468822 RTF1Q92541 710 aaKnown RBP20.65■□□□□ 0.9
SRRM1-207ENST00000468822 LTBP1Q14766 1721 aa20.64■□□□□ 0.9
SRRM1-207ENST00000468822 RASSF10A6NK89 507 aa20.64■□□□□ 0.89
SRRM1-207ENST00000468822 LBX1P52954 281 aa20.64■□□□□ 0.89
SRRM1-207ENST00000468822 FMR1Q06787 632 aaKnown RBP eCLIP20.64■□□□□ 0.89
SRRM1-207ENST00000468822 CFAP53Q96M91 514 aa20.64■□□□□ 0.89
SRRM1-207ENST00000468822 PPP2R1AP30153 589 aa20.63■□□□□ 0.89
SRRM1-207ENST00000468822 ALDH1B1P30837 517 aa20.63■□□□□ 0.89
SRRM1-207ENST00000468822 GPC2Q8N158 579 aa20.63■□□□□ 0.89
SRRM1-207ENST00000468822 AIDAQ96BJ3 306 aa20.63■□□□□ 0.89
SRRM1-207ENST00000468822 PNMA8AQ86V59 439 aaPredicted RBP20.62■□□□□ 0.89
SRRM1-207ENST00000468822 NGEFQ8N5V2 710 aa20.62■□□□□ 0.89
SRRM1-207ENST00000468822 PSMD1Q99460 953 aa20.62■□□□□ 0.89
SRRM1-207ENST00000468822 HSPA8P11142 646 aaKnown RBP20.61■□□□□ 0.89
SRRM1-207ENST00000468822 TAF7Q15545 349 aaPredicted RBP20.61■□□□□ 0.89
SRRM1-207ENST00000468822 DEFB115Q30KQ5 88 aa20.61■□□□□ 0.89
SRRM1-207ENST00000468822 TTLL7Q6ZT98 887 aa20.61■□□□□ 0.89
SRRM1-207ENST00000468822 NUDCQ9Y266 331 aa20.61■□□□□ 0.89
SRRM1-207ENST00000468822 UBN2Q6ZU65 1347 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms