RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 WDR43Q15061 677 aaKnown RBP eCLIP4.67□□□□□ -1.66
TRIM59-202ENST00000468542 C1orf141Q5JVX7 400 aa4.67□□□□□ -1.66
TRIM59-202ENST00000468542 ZNF454Q8N9F8 522 aa4.67□□□□□ -1.66
TRIM59-202ENST00000468542 PLEKHF1Q96S99 279 aa4.67□□□□□ -1.66
TRIM59-202ENST00000468542 LRP5O75197 1615 aa4.67□□□□□ -1.66
TRIM59-202ENST00000468542 MYH14Q7Z406 1995 aaKnown RBP4.67□□□□□ -1.66
TRIM59-202ENST00000468542 CEMIPQ8WUJ3 1361 aa4.66□□□□□ -1.66
TRIM59-202ENST00000468542 TJP1Q07157 1748 aa4.66□□□□□ -1.66
TRIM59-202ENST00000468542 CACNA1FO60840 1977 aa4.66□□□□□ -1.66
TRIM59-202ENST00000468542 HMOX1P09601 288 aa4.66□□□□□ -1.66
TRIM59-202ENST00000468542 PTPREP23469 700 aa4.66□□□□□ -1.66
TRIM59-202ENST00000468542 BAG6P46379 1132 aa4.66□□□□□ -1.66
TRIM59-202ENST00000468542 LMOD3Q0VAK6 560 aa4.66□□□□□ -1.66
TRIM59-202ENST00000468542 SF3B2Q13435 895 aaKnown RBP4.66□□□□□ -1.66
TRIM59-202ENST00000468542 ZNF530Q6P9A1 599 aaPredicted RBP4.66□□□□□ -1.66
TRIM59-202ENST00000468542 DDX54Q8TDD1 881 aaKnown RBP4.66□□□□□ -1.66
TRIM59-202ENST00000468542 PNISRQ8TF01 805 aaKnown RBP4.66□□□□□ -1.66
TRIM59-202ENST00000468542 MAP3K5Q99683 1374 aa4.65□□□□□ -1.66
TRIM59-202ENST00000468542 KDM6AO15550 1401 aaPredicted RBP4.65□□□□□ -1.66
TRIM59-202ENST00000468542 GNAT3A8MTJ3 354 aa4.65□□□□□ -1.67
TRIM59-202ENST00000468542 EVI5O60447 810 aa4.65□□□□□ -1.67
TRIM59-202ENST00000468542 CNGB1Q14028 1251 aaPredicted RBP4.65□□□□□ -1.67
TRIM59-202ENST00000468542 MTHFSDQ2M296 383 aaKnown RBP4.65□□□□□ -1.67
TRIM59-202ENST00000468542 SLC27A3Q5K4L6 730 aa4.65□□□□□ -1.67
TRIM59-202ENST00000468542 DIEXFQ68CQ4 756 aaKnown RBP4.65□□□□□ -1.67
TRIM59-202ENST00000468542 THSD4Q6ZMP0 1018 aa4.65□□□□□ -1.67
TRIM59-202ENST00000468542 SMARCC1Q92922 1105 aaPredicted RBP4.65□□□□□ -1.67
TRIM59-202ENST00000468542 ZDHHC16Q969W1 377 aa4.65□□□□□ -1.67
TRIM59-202ENST00000468542 RUNDC1Q96C34 613 aa4.65□□□□□ -1.67
TRIM59-202ENST00000468542 ADAM33Q9BZ11 813 aa4.65□□□□□ -1.67
TRIM59-202ENST00000468542 MRS2Q9HD23 443 aa4.65□□□□□ -1.67
TRIM59-202ENST00000468542 EMILIN3Q9NT22 766 aa4.65□□□□□ -1.67
TRIM59-202ENST00000468542 BABAM1Q9NWV8 329 aa4.65□□□□□ -1.67
TRIM59-202ENST00000468542 MAPK8IP3Q9UPT6 1336 aa4.65□□□□□ -1.67
TRIM59-202ENST00000468542 LAMB4A4D0S4 1761 aa4.65□□□□□ -1.67
TRIM59-202ENST00000468542 C4AP0C0L4 1744 aa4.64□□□□□ -1.67
TRIM59-202ENST00000468542 C4BP0C0L5 1744 aa4.64□□□□□ -1.67
TRIM59-202ENST00000468542 TRIM37O94972 964 aa4.64□□□□□ -1.67
TRIM59-202ENST00000468542 APBA3O96018 575 aa4.64□□□□□ -1.67
TRIM59-202ENST00000468542 PRIM1P49642 420 aaKnown RBP4.64□□□□□ -1.67
TRIM59-202ENST00000468542 PTPN5P54829 565 aa4.64□□□□□ -1.67
TRIM59-202ENST00000468542 NFE2L2Q16236 605 aa4.64□□□□□ -1.67
TRIM59-202ENST00000468542 CCDC27Q2M243 656 aa4.64□□□□□ -1.67
TRIM59-202ENST00000468542 RTF1Q92541 710 aaKnown RBP4.64□□□□□ -1.67
TRIM59-202ENST00000468542 PHACTR3Q96KR7 559 aa4.64□□□□□ -1.67
TRIM59-202ENST00000468542 CAMKK2Q96RR4 588 aa4.64□□□□□ -1.67
TRIM59-202ENST00000468542 SLC52A2Q9HAB3 445 aa4.64□□□□□ -1.67
TRIM59-202ENST00000468542 TMOD3Q9NYL9 352 aa4.64□□□□□ -1.67
TRIM59-202ENST00000468542 ADAMTS8Q9UP79 889 aa4.64□□□□□ -1.67
TRIM59-202ENST00000468542 KIF13BQ9NQT8 1826 aa4.64□□□□□ -1.67
TRIM59-202ENST00000468542 KCPQ6ZWJ8 1503 aa4.63□□□□□ -1.67
TRIM59-202ENST00000468542 RNMTO43148 476 aaKnown RBP4.63□□□□□ -1.67
TRIM59-202ENST00000468542 KCNQ2O43526 872 aa4.63□□□□□ -1.67
TRIM59-202ENST00000468542 TMPOP42166 694 aaKnown RBP4.63□□□□□ -1.67
TRIM59-202ENST00000468542 CABP4P57796 275 aa4.63□□□□□ -1.67
TRIM59-202ENST00000468542 CALD1Q05682 793 aaKnown RBP4.63□□□□□ -1.67
TRIM59-202ENST00000468542 FAM182BQ5T319 152 aa4.63□□□□□ -1.67
TRIM59-202ENST00000468542 VSIG10Q8N0Z9 540 aa4.63□□□□□ -1.67
TRIM59-202ENST00000468542 IL17REQ8NFR9 667 aa4.63□□□□□ -1.67
TRIM59-202ENST00000468542 PIGBQ92521 554 aa4.63□□□□□ -1.67
TRIM59-202ENST00000468542 NBPF3Q9H094 633 aa4.63□□□□□ -1.67
TRIM59-202ENST00000468542 PCDHGA10Q9Y5H3 936 aa4.63□□□□□ -1.67
TRIM59-202ENST00000468542 PALLDQ8WX93 1383 aa4.63□□□□□ -1.67
TRIM59-202ENST00000468542 PPP1R3GB7ZBB8 358 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 RIPK4P57078 832 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 TEFQ10587 303 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 TXNRD1Q16881 649 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 CCDC184Q52MB2 194 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 MPRIPQ6WCQ1 1025 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 NYAP1Q6ZVC0 841 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 LAPTM4BQ86VI4 370 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 NFATC2IPQ8NCF5 419 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 FBXW7Q969H0 707 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 SYTL4Q96C24 671 aaPredicted RBP4.62□□□□□ -1.67
TRIM59-202ENST00000468542 DDX27Q96GQ7 796 aaKnown RBP4.62□□□□□ -1.67
TRIM59-202ENST00000468542 LARP6Q9BRS8 491 aaKnown RBP4.62□□□□□ -1.67
TRIM59-202ENST00000468542 ATG3Q9NT62 314 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 RABGEF1Q9UJ41 708 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 NRXN2Q9P2S2 1712 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 BCORQ6W2J9 1755 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 HEG1Q9ULI3 1381 aa4.62□□□□□ -1.67
TRIM59-202ENST00000468542 GOLGB1Q14789 3259 aaKnown RBP4.61□□□□□ -1.67
TRIM59-202ENST00000468542 BRCA1P38398 1863 aaKnown RBP4.61□□□□□ -1.67
TRIM59-202ENST00000468542 LOC102724428A0A0B4J2F2 783 aa4.61□□□□□ -1.67
TRIM59-202ENST00000468542 PHF14O94880 888 aa4.61□□□□□ -1.67
TRIM59-202ENST00000468542 COL9A1P20849 921 aa4.61□□□□□ -1.67
TRIM59-202ENST00000468542 SIK1P57059 783 aa4.61□□□□□ -1.67
TRIM59-202ENST00000468542 EN1Q05925 392 aaPredicted RBP4.61□□□□□ -1.67
TRIM59-202ENST00000468542 CAMK2BQ13554 666 aa4.61□□□□□ -1.67
TRIM59-202ENST00000468542 TAF7Q15545 349 aaPredicted RBP4.61□□□□□ -1.67
TRIM59-202ENST00000468542 ZNF790Q6PG37 636 aa4.61□□□□□ -1.67
TRIM59-202ENST00000468542 PTF1AQ7RTS3 328 aa4.61□□□□□ -1.67
TRIM59-202ENST00000468542 DEFB132Q7Z7B7 95 aa4.61□□□□□ -1.67
TRIM59-202ENST00000468542 MRPL50Q8N5N7 158 aaKnown RBP4.61□□□□□ -1.67
TRIM59-202ENST00000468542 ACSBG1Q96GR2 724 aa4.61□□□□□ -1.67
TRIM59-202ENST00000468542 CFAP44Q96MT7 982 aa4.61□□□□□ -1.67
TRIM59-202ENST00000468542 TEX13AQ9BXU3 409 aaPredicted RBP4.61□□□□□ -1.67
TRIM59-202ENST00000468542 CHMP4AQ9BY43 222 aa4.61□□□□□ -1.67
TRIM59-202ENST00000468542 LGR6Q9HBX8 967 aa4.61□□□□□ -1.67
TRIM59-202ENST00000468542 CCNL1Q9UK58 526 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms