RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 RAB11FIP3O75154 756 aa11.11□□□□□ -0.63
TMEM254-209ENST00000467529 PDE1AP54750 535 aa11.11□□□□□ -0.63
TMEM254-209ENST00000467529 GCKRQ14397 625 aa11.11□□□□□ -0.63
TMEM254-209ENST00000467529 TBC1D9Q6ZT07 1266 aa11.11□□□□□ -0.63
TMEM254-209ENST00000467529 PLBD2Q8NHP8 589 aa11.11□□□□□ -0.63
TMEM254-209ENST00000467529 KAZALD1Q96I82 304 aa11.11□□□□□ -0.63
TMEM254-209ENST00000467529 CDCA7Q9BWT1 371 aaPredicted RBP11.11□□□□□ -0.63
TMEM254-209ENST00000467529 ATG3Q9NT62 314 aa11.11□□□□□ -0.63
TMEM254-209ENST00000467529 THRAP3Q9Y2W1 955 aaKnown RBP11.11□□□□□ -0.63
TMEM254-209ENST00000467529 SLIT2O94813 1529 aa11.11□□□□□ -0.63
TMEM254-209ENST00000467529 AFDNP55196 1824 aaKnown RBP11.1□□□□□ -0.63
TMEM254-209ENST00000467529 CDC45O75419 566 aa11.1□□□□□ -0.63
TMEM254-209ENST00000467529 KCNA4P22459 653 aa11.1□□□□□ -0.63
TMEM254-209ENST00000467529 C22orf23Q9BZE7 217 aa11.1□□□□□ -0.63
TMEM254-209ENST00000467529 SPATA31A5Q5VU36 1347 aa11.1□□□□□ -0.63
TMEM254-209ENST00000467529 SPATA31A7Q8IWB4 1347 aa11.1□□□□□ -0.63
TMEM254-209ENST00000467529 SDSP20132 328 aa11.1□□□□□ -0.63
TMEM254-209ENST00000467529 TTLL7Q6ZT98 887 aa11.1□□□□□ -0.63
TMEM254-209ENST00000467529 VSIG10Q8N0Z9 540 aa11.1□□□□□ -0.63
TMEM254-209ENST00000467529 BCL9O00512 1426 aa11.1□□□□□ -0.63
TMEM254-209ENST00000467529 NUP188Q5SRE5 1749 aa11.09□□□□□ -0.63
TMEM254-209ENST00000467529 SLC4A3P48751 1232 aa11.09□□□□□ -0.63
TMEM254-209ENST00000467529 RHPN1Q8TCX5 695 aa11.09□□□□□ -0.63
TMEM254-209ENST00000467529 BICC1Q9H694 974 aaKnown RBP11.09□□□□□ -0.63
TMEM254-209ENST00000467529 IL1RAPL2Q9NP60 686 aa11.09□□□□□ -0.63
TMEM254-209ENST00000467529 ATP5J2-PTCD1G3V325 749 aa11.08□□□□□ -0.64
TMEM254-209ENST00000467529 MX1P20591 662 aa11.08□□□□□ -0.64
TMEM254-209ENST00000467529 DDB1Q16531 1140 aa11.08□□□□□ -0.64
TMEM254-209ENST00000467529 HSP90AB4PQ58FF6 505 aa11.08□□□□□ -0.64
TMEM254-209ENST00000467529 DNAJC10Q8IXB1 793 aa11.08□□□□□ -0.64
TMEM254-209ENST00000467529 DOT1LQ8TEK3 1739 aa11.08□□□□□ -0.64
TMEM254-209ENST00000467529 KIF1BPQ96EK5 621 aa11.08□□□□□ -0.64
TMEM254-209ENST00000467529 RBM42Q9BTD8 480 aaKnown RBP11.08□□□□□ -0.64
TMEM254-209ENST00000467529 TSHZ3Q63HK5 1081 aa11.08□□□□□ -0.64
TMEM254-209ENST00000467529 TEX13AQ9BXU3 409 aaPredicted RBP11.08□□□□□ -0.64
TMEM254-209ENST00000467529 STAP2Q9UGK3 403 aa11.08□□□□□ -0.64
TMEM254-209ENST00000467529 CCDC9Q9Y3X0 531 aaKnown RBP11.08□□□□□ -0.64
TMEM254-209ENST00000467529 JCADQ9P266 1359 aa11.07□□□□□ -0.64
TMEM254-209ENST00000467529 TUBGCP6Q96RT7 1819 aa11.07□□□□□ -0.64
TMEM254-209ENST00000467529 PRIM1P49642 420 aaKnown RBP11.07□□□□□ -0.64
TMEM254-209ENST00000467529 BARGINQ6ZT62 677 aa11.07□□□□□ -0.64
TMEM254-209ENST00000467529 JARID2Q92833 1246 aaPredicted RBP11.07□□□□□ -0.64
TMEM254-209ENST00000467529 SYTL4Q96C24 671 aaPredicted RBP11.07□□□□□ -0.64
TMEM254-209ENST00000467529 PA2G4Q9UQ80 394 aaKnown RBP11.07□□□□□ -0.64
TMEM254-209ENST00000467529 EPHA10Q5JZY3 1008 aa11.07□□□□□ -0.64
TMEM254-209ENST00000467529 NUTM1Q86Y26 1132 aa11.07□□□□□ -0.64
TMEM254-209ENST00000467529 SLC4A9Q96Q91 983 aa11.07□□□□□ -0.64
TMEM254-209ENST00000467529 KAT6BQ8WYB5 2073 aa11.06□□□□□ -0.64
TMEM254-209ENST00000467529 A0A087WZG4 1122 aa11.06□□□□□ -0.64
TMEM254-209ENST00000467529 STARD3NLO95772 234 aa11.06□□□□□ -0.64
TMEM254-209ENST00000467529 RBM25P49756 843 aaKnown RBP11.06□□□□□ -0.64
TMEM254-209ENST00000467529 OS9Q13438 667 aaPredicted RBP11.06□□□□□ -0.64
TMEM254-209ENST00000467529 UNC5CLQ8IV45 518 aa11.06□□□□□ -0.64
TMEM254-209ENST00000467529 MARCH10Q8NA82 808 aaPredicted RBP11.06□□□□□ -0.64
TMEM254-209ENST00000467529 ZBTB3Q9H5J0 574 aa11.06□□□□□ -0.64
TMEM254-209ENST00000467529 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.06□□□□□ -0.64
TMEM254-209ENST00000467529 CASP7P55210 303 aa11.05□□□□□ -0.64
TMEM254-209ENST00000467529 UBE3BQ7Z3V4 1068 aa11.05□□□□□ -0.64
TMEM254-209ENST00000467529 HOMEZQ8IX15 550 aa11.05□□□□□ -0.64
TMEM254-209ENST00000467529 C8orf37Q96NL8 207 aa11.05□□□□□ -0.64
TMEM254-209ENST00000467529 AOX1Q06278 1338 aa11.05□□□□□ -0.64
TMEM254-209ENST00000467529 COL15A1P39059 1388 aa11.05□□□□□ -0.64
TMEM254-209ENST00000467529 ERC1Q8IUD2 1116 aa11.05□□□□□ -0.64
TMEM254-209ENST00000467529 NGLY1Q96IV0 654 aa11.05□□□□□ -0.64
TMEM254-209ENST00000467529 BCL9LQ86UU0 1499 aa11.04□□□□□ -0.64
TMEM254-209ENST00000467529 TJP1Q07157 1748 aa11.04□□□□□ -0.64
TMEM254-209ENST00000467529 H7C1W4 665 aa11.04□□□□□ -0.64
TMEM254-209ENST00000467529 CYP19A1P11511 503 aaPredicted RBP11.04□□□□□ -0.64
TMEM254-209ENST00000467529 BECN1Q14457 450 aa11.04□□□□□ -0.64
TMEM254-209ENST00000467529 ACSBG1Q96GR2 724 aa11.04□□□□□ -0.64
TMEM254-209ENST00000467529 CWC25Q9NXE8 425 aaPredicted RBP11.04□□□□□ -0.64
TMEM254-209ENST00000467529 ZNF330Q9Y3S2 320 aaPredicted RBP11.04□□□□□ -0.64
TMEM254-209ENST00000467529 G3BP1Q13283 466 aaKnown RBP eCLIP11.03□□□□□ -0.64
TMEM254-209ENST00000467529 VPS72Q15906 364 aa11.03□□□□□ -0.64
TMEM254-209ENST00000467529 RABL6Q3YEC7 729 aaPredicted RBP11.03□□□□□ -0.64
TMEM254-209ENST00000467529 CASC1Q6TDU7 716 aa11.03□□□□□ -0.64
TMEM254-209ENST00000467529 SASH1O94885 1247 aa11.03□□□□□ -0.64
TMEM254-209ENST00000467529 RFX5P48382 616 aaPredicted RBP11.03□□□□□ -0.64
TMEM254-209ENST00000467529 FAM98CQ17RN3 349 aaKnown RBP11.03□□□□□ -0.64
TMEM254-209ENST00000467529 CLASRPQ8N2M8 674 aaKnown RBP11.03□□□□□ -0.64
TMEM254-209ENST00000467529 CCDC191Q8NCU4 936 aa11.03□□□□□ -0.64
TMEM254-209ENST00000467529 KLHDC4Q8TBB5 520 aa11.03□□□□□ -0.64
TMEM254-209ENST00000467529 PI4K2BQ8TCG2 481 aa11.03□□□□□ -0.64
TMEM254-209ENST00000467529 CERKQ8TCT0 537 aa11.03□□□□□ -0.64
TMEM254-209ENST00000467529 ISCA1Q9BUE6 129 aa11.03□□□□□ -0.64
TMEM254-209ENST00000467529 USP42Q9H9J4 1324 aaKnown RBP11.02□□□□□ -0.65
TMEM254-209ENST00000467529 A0A0G2JS52 829 aa11.02□□□□□ -0.65
TMEM254-209ENST00000467529 TRIM6-TRIM34B2RNG4 842 aa11.02□□□□□ -0.65
TMEM254-209ENST00000467529 TCIRG1Q13488 830 aa11.02□□□□□ -0.65
TMEM254-209ENST00000467529 KIF6Q6ZMV9 814 aa11.02□□□□□ -0.65
TMEM254-209ENST00000467529 FNBP4Q8N3X1 1017 aaPredicted RBP11.02□□□□□ -0.65
TMEM254-209ENST00000467529 RILPL2Q969X0 211 aa11.02□□□□□ -0.65
TMEM254-209ENST00000467529 TBC1D2Q9BYX2 928 aa11.02□□□□□ -0.65
TMEM254-209ENST00000467529 SIL1Q9H173 461 aa11.02□□□□□ -0.65
TMEM254-209ENST00000467529 SPATA31A6Q5VVP1 1343 aa11.01□□□□□ -0.65
TMEM254-209ENST00000467529 FOXO4P98177 505 aa11.01□□□□□ -0.65
TMEM254-209ENST00000467529 KIF2CQ99661 725 aa11.01□□□□□ -0.65
TMEM254-209ENST00000467529 COPRSQ9NQ92 184 aa11.01□□□□□ -0.65
TMEM254-209ENST00000467529 ZBTB1Q9Y2K1 713 aa11.01□□□□□ -0.65
TMEM254-209ENST00000467529 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms