RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 DICER1Q9UPY3 1922 aaKnown RBP19.09■□□□□ 0.65
RB1-202ENST00000467505 FER1L6Q2WGJ9 1857 aa19.09■□□□□ 0.65
RB1-202ENST00000467505 ARFGEF2Q9Y6D5 1785 aa19.09■□□□□ 0.65
RB1-202ENST00000467505 WDR90Q96KV7 1748 aa19.08■□□□□ 0.65
RB1-202ENST00000467505 GLTPD2A6NH11 291 aa19.08■□□□□ 0.64
RB1-202ENST00000467505 STYK1Q6J9G0 422 aa19.08■□□□□ 0.64
RB1-202ENST00000467505 NBPF5PQ86XG9 351 aaPredicted RBP19.08■□□□□ 0.64
RB1-202ENST00000467505 DPY19L2Q6NUT2 758 aa19.07■□□□□ 0.64
RB1-202ENST00000467505 KDM3BQ7LBC6 1761 aa19.06■□□□□ 0.64
RB1-202ENST00000467505 MAPK8IP3Q9UPT6 1336 aa19.06■□□□□ 0.64
RB1-202ENST00000467505 PRAMEF22A3QJZ6 481 aa19.06■□□□□ 0.64
RB1-202ENST00000467505 NFKBIEO00221 500 aa19.06■□□□□ 0.64
RB1-202ENST00000467505 C21orf2O43822 256 aa19.06■□□□□ 0.64
RB1-202ENST00000467505 VEGFAP15692 232 aaPredicted RBP19.06■□□□□ 0.64
RB1-202ENST00000467505 PIP4K2AP48426 406 aaPredicted RBP19.06■□□□□ 0.64
RB1-202ENST00000467505 TPTE2Q6XPS3 522 aa19.06■□□□□ 0.64
RB1-202ENST00000467505 CCDC24Q8N4L8 307 aa19.06■□□□□ 0.64
RB1-202ENST00000467505 SMC1BQ8NDV3 1235 aa19.06■□□□□ 0.64
RB1-202ENST00000467505 MASTLQ96GX5 879 aa19.06■□□□□ 0.64
RB1-202ENST00000467505 LTBP3Q9NS15 1303 aa19.05■□□□□ 0.64
RB1-202ENST00000467505 SRGNP10124 158 aa19.05■□□□□ 0.64
RB1-202ENST00000467505 TAOK3Q9H2K8 898 aa19.05■□□□□ 0.64
RB1-202ENST00000467505 NFE2L2Q16236 605 aa19.04■□□□□ 0.64
RB1-202ENST00000467505 ZNF219Q9P2Y4 722 aaPredicted RBP19.04■□□□□ 0.64
RB1-202ENST00000467505 NIP7Q9Y221 180 aaKnown RBP eCLIP19.04■□□□□ 0.64
RB1-202ENST00000467505 SLX4Q8IY92 1834 aa19.04■□□□□ 0.64
RB1-202ENST00000467505 ERFEQ4G0M1 354 aa19.03■□□□□ 0.64
RB1-202ENST00000467505 PRPF40BQ6NWY9 871 aaKnown RBP19.03■□□□□ 0.64
RB1-202ENST00000467505 NBPF26B4DH59 902 aa19.02■□□□□ 0.64
RB1-202ENST00000467505 NPR1P16066 1061 aa19.02■□□□□ 0.64
RB1-202ENST00000467505 PRELPP51888 382 aa19.02■□□□□ 0.64
RB1-202ENST00000467505 NBPF10Q6P3W6 841 aaKnown RBP19.02■□□□□ 0.64
RB1-202ENST00000467505 NBPF15Q8N660 670 aa19.02■□□□□ 0.64
RB1-202ENST00000467505 PLEKHF1Q96S99 279 aa19.02■□□□□ 0.64
RB1-202ENST00000467505 GTF2E1P29083 439 aaPredicted RBP19.01■□□□□ 0.63
RB1-202ENST00000467505 MIS18AQ9NYP9 233 aa19.01■□□□□ 0.63
RB1-202ENST00000467505 RALBP1Q15311 655 aa19■□□□□ 0.63
RB1-202ENST00000467505 IFFO2Q5TF58 517 aa19■□□□□ 0.63
RB1-202ENST00000467505 KIF6Q6ZMV9 814 aa19■□□□□ 0.63
RB1-202ENST00000467505 DNAJC5GQ8N7S2 189 aa19■□□□□ 0.63
RB1-202ENST00000467505 NYXQ9GZU5 481 aa19■□□□□ 0.63
RB1-202ENST00000467505 NUP98P52948 1817 aa19■□□□□ 0.63
RB1-202ENST00000467505 ERVV-1B6SEH8 477 aa18.99■□□□□ 0.63
RB1-202ENST00000467505 CCDC93Q567U6 631 aa18.99■□□□□ 0.63
RB1-202ENST00000467505 ALDH1B1P30837 517 aa18.98■□□□□ 0.63
RB1-202ENST00000467505 EIF4A1P60842 406 aaKnown RBP18.98■□□□□ 0.63
RB1-202ENST00000467505 KLRG2A4D1S0 409 aaPredicted RBP18.97■□□□□ 0.63
RB1-202ENST00000467505 LMOD3Q0VAK6 560 aa18.97■□□□□ 0.63
RB1-202ENST00000467505 KLRG1Q96E93 195 aa18.97■□□□□ 0.63
RB1-202ENST00000467505 ERBB4Q15303 1308 aa18.97■□□□□ 0.63
RB1-202ENST00000467505 MAP3K15Q6ZN16 1313 aa18.97■□□□□ 0.63
RB1-202ENST00000467505 FAM177BA6PVY3 158 aa18.96■□□□□ 0.63
RB1-202ENST00000467505 HLFQ16534 295 aa18.96■□□□□ 0.63
RB1-202ENST00000467505 NGEFQ8N5V2 710 aa18.96■□□□□ 0.63
RB1-202ENST00000467505 RRP7AQ9Y3A4 280 aaKnown RBP18.96■□□□□ 0.63
RB1-202ENST00000467505 RTKN2Q8IZC4 609 aa18.95■□□□□ 0.62
RB1-202ENST00000467505 TSPYL4Q9UJ04 414 aa18.95■□□□□ 0.62
RB1-202ENST00000467505 MYL6BP14649 208 aa18.94■□□□□ 0.62
RB1-202ENST00000467505 THUMPD2Q9BTF0 503 aaKnown RBP18.94■□□□□ 0.62
RB1-202ENST00000467505 BABAM1Q9NWV8 329 aa18.94■□□□□ 0.62
RB1-202ENST00000467505 IBTKQ9P2D0 1353 aaPredicted RBP18.93■□□□□ 0.62
RB1-202ENST00000467505 IQCA1LA6NCM1 817 aa18.93■□□□□ 0.62
RB1-202ENST00000467505 RIPK4P57078 832 aa18.93■□□□□ 0.62
RB1-202ENST00000467505 FKBP4Q02790 459 aaKnown RBP eCLIP18.93■□□□□ 0.62
RB1-202ENST00000467505 C7orf43Q8WVR3 580 aa18.93■□□□□ 0.62
RB1-202ENST00000467505 SCN4AP35499 1836 aa18.93■□□□□ 0.62
RB1-202ENST00000467505 RIC1Q4ADV7 1423 aa18.91■□□□□ 0.62
RB1-202ENST00000467505 POTECB2RU33 542 aa18.91■□□□□ 0.62
RB1-202ENST00000467505 HTRA3P83110 453 aa18.91■□□□□ 0.62
RB1-202ENST00000467505 CC2D2BQ6DHV5 1058 aa18.91■□□□□ 0.62
RB1-202ENST00000467505 TTLL7Q6ZT98 887 aa18.91■□□□□ 0.62
RB1-202ENST00000467505 JMYQ8N9B5 988 aa18.91■□□□□ 0.62
RB1-202ENST00000467505 RPGRQ92834 1020 aaKnown RBP18.91■□□□□ 0.62
RB1-202ENST00000467505 DDNO94850 711 aaPredicted RBP18.9■□□□□ 0.62
RB1-202ENST00000467505 CRY2Q49AN0 593 aa18.9■□□□□ 0.62
RB1-202ENST00000467505 GRIPAP1Q4V328 841 aa18.9■□□□□ 0.62
RB1-202ENST00000467505 PPP1R42Q7Z4L9 355 aa18.9■□□□□ 0.62
RB1-202ENST00000467505 ZBTB3Q9H5J0 574 aa18.9■□□□□ 0.62
RB1-202ENST00000467505 MYBBP1AQ9BQG0 1328 aaKnown RBP18.9■□□□□ 0.62
RB1-202ENST00000467505 TMPOP42166 694 aaKnown RBP18.89■□□□□ 0.61
RB1-202ENST00000467505 PARP10Q53GL7 1025 aa18.89■□□□□ 0.61
RB1-202ENST00000467505 CHADLQ6NUI6 762 aa18.89■□□□□ 0.61
RB1-202ENST00000467505 GIGYF2Q6Y7W6 1299 aaKnown RBP18.89■□□□□ 0.61
RB1-202ENST00000467505 NUTM1Q86Y26 1132 aa18.89■□□□□ 0.61
RB1-202ENST00000467505 GPTP24298 496 aa18.88■□□□□ 0.61
RB1-202ENST00000467505 L3MBTL3Q96JM7 780 aaPredicted RBP18.88■□□□□ 0.61
RB1-202ENST00000467505 ZNF277Q9NRM2 450 aaPredicted RBP18.88■□□□□ 0.61
RB1-202ENST00000467505 ABCC12Q96J65 1359 aa18.88■□□□□ 0.61
RB1-202ENST00000467505 EIF2S2P20042 333 aaKnown RBP18.87■□□□□ 0.61
RB1-202ENST00000467505 IARSP41252 1262 aaKnown RBP18.87■□□□□ 0.61
RB1-202ENST00000467505 WDR43Q15061 677 aaKnown RBP eCLIP18.87■□□□□ 0.61
RB1-202ENST00000467505 ZNF34Q8IZ26 560 aa18.87■□□□□ 0.61
RB1-202ENST00000467505 JDP2Q8WYK2 163 aa18.87■□□□□ 0.61
RB1-202ENST00000467505 PSMD1Q99460 953 aa18.87■□□□□ 0.61
RB1-202ENST00000467505 TMX4Q9H1E5 349 aaPredicted RBP18.87■□□□□ 0.61
RB1-202ENST00000467505 UBN2Q6ZU65 1347 aa18.86■□□□□ 0.61
RB1-202ENST00000467505 HOXA10P31260 410 aaPredicted RBP18.86■□□□□ 0.61
RB1-202ENST00000467505 DDX10Q13206 875 aaKnown RBP18.86■□□□□ 0.61
RB1-202ENST00000467505 HSP90AB3PQ58FF7 597 aa18.86■□□□□ 0.61
RB1-202ENST00000467505 RBM17Q96I25 401 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms