RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 AMPHP49418 695 aa9.83□□□□□ -0.84
SND1-205ENST00000467238 CDCA8Q53HL2 280 aa9.83□□□□□ -0.84
SND1-205ENST00000467238 CDCA7LQ96GN5 454 aa9.83□□□□□ -0.84
SND1-205ENST00000467238 TIMELESSQ9UNS1 1208 aa9.83□□□□□ -0.84
SND1-205ENST00000467238 ITGB4P16144 1822 aa9.83□□□□□ -0.84
SND1-205ENST00000467238 MEGF6O75095 1541 aa9.82□□□□□ -0.84
SND1-205ENST00000467238 RRS1Q15050 365 aaKnown RBP9.82□□□□□ -0.84
SND1-205ENST00000467238 PDGFDQ9GZP0 370 aaPredicted RBP9.82□□□□□ -0.84
SND1-205ENST00000467238 GGNBP2Q9H3C7 697 aa9.82□□□□□ -0.84
SND1-205ENST00000467238 SLC15A2Q16348 729 aa9.81□□□□□ -0.84
SND1-205ENST00000467238 PKDCCQ504Y2 493 aa9.81□□□□□ -0.84
SND1-205ENST00000467238 STK32BQ9NY57 414 aa9.81□□□□□ -0.84
SND1-205ENST00000467238 TAF1LQ8IZX4 1826 aa9.81□□□□□ -0.84
SND1-205ENST00000467238 COL24A1Q17RW2 1714 aa9.81□□□□□ -0.84
SND1-205ENST00000467238 KIF24Q5T7B8 1368 aa9.8□□□□□ -0.84
SND1-205ENST00000467238 PKD1L3Q7Z443 1732 aa9.8□□□□□ -0.84
SND1-205ENST00000467238 MAP3K7O43318 606 aa9.8□□□□□ -0.84
SND1-205ENST00000467238 DGAT1O75907 488 aa9.8□□□□□ -0.84
SND1-205ENST00000467238 PRSS12P56730 875 aa9.8□□□□□ -0.84
SND1-205ENST00000467238 COPS2P61201 443 aa9.8□□□□□ -0.84
SND1-205ENST00000467238 DDX54Q8TDD1 881 aaKnown RBP9.8□□□□□ -0.84
SND1-205ENST00000467238 TMUB1Q9BVT8 246 aa9.8□□□□□ -0.84
SND1-205ENST00000467238 PPP1R1BQ9UD71 204 aaPredicted RBP9.8□□□□□ -0.84
SND1-205ENST00000467238 NSD3Q9BZ95 1437 aa9.8□□□□□ -0.84
SND1-205ENST00000467238 FLT4P35916 1363 aa9.79□□□□□ -0.84
SND1-205ENST00000467238 ZBTB7AO95365 584 aa9.79□□□□□ -0.84
SND1-205ENST00000467238 GGCXP38435 758 aa9.79□□□□□ -0.84
SND1-205ENST00000467238 NBR1Q14596 966 aa9.79□□□□□ -0.84
SND1-205ENST00000467238 NBPF6Q5VWK0 638 aa9.79□□□□□ -0.84
SND1-205ENST00000467238 TATDN2Q93075 761 aa9.79□□□□□ -0.84
SND1-205ENST00000467238 NBPF4Q96M43 638 aa9.79□□□□□ -0.84
SND1-205ENST00000467238 CARD14Q9BXL6 1004 aa9.79□□□□□ -0.84
SND1-205ENST00000467238 PCGF6Q9BYE7 350 aa9.79□□□□□ -0.84
SND1-205ENST00000467238 SMG6Q86US8 1419 aaKnown RBP9.79□□□□□ -0.84
SND1-205ENST00000467238 TOGARAM1Q9Y4F4 1720 aa9.79□□□□□ -0.84
SND1-205ENST00000467238 NSD2O96028 1365 aa9.78□□□□□ -0.84
SND1-205ENST00000467238 INSRP06213 1382 aa9.78□□□□□ -0.84
SND1-205ENST00000467238 PDIA6Q15084 440 aa9.78□□□□□ -0.84
SND1-205ENST00000467238 HSP90AB2PQ58FF8 381 aa9.78□□□□□ -0.84
SND1-205ENST00000467238 ZCRB1Q8TBF4 217 aaKnown RBP9.78□□□□□ -0.84
SND1-205ENST00000467238 LRRC4BQ9NT99 713 aa9.78□□□□□ -0.84
SND1-205ENST00000467238 ARIH1Q9Y4X5 557 aaPredicted RBP9.78□□□□□ -0.84
SND1-205ENST00000467238 CGNL1Q0VF96 1302 aa9.78□□□□□ -0.84
SND1-205ENST00000467238 RNF40O75150 1001 aa9.77□□□□□ -0.85
SND1-205ENST00000467238 SLC19A1P41440 591 aa9.77□□□□□ -0.85
SND1-205ENST00000467238 PRIM1P49642 420 aaKnown RBP9.77□□□□□ -0.85
SND1-205ENST00000467238 ZNF827Q17R98 1081 aa9.77□□□□□ -0.85
SND1-205ENST00000467238 SLC27A3Q5K4L6 730 aa9.77□□□□□ -0.85
SND1-205ENST00000467238 USHBP1Q8N6Y0 703 aa9.77□□□□□ -0.85
SND1-205ENST00000467238 MTFR1LQ9H019 292 aa9.77□□□□□ -0.85
SND1-205ENST00000467238 C5P01031 1676 aa9.77□□□□□ -0.85
SND1-205ENST00000467238 NCAPD2Q15021 1401 aa9.76□□□□□ -0.85
SND1-205ENST00000467238 RNF223E7ERA6 249 aa9.76□□□□□ -0.85
SND1-205ENST00000467238 SYTL4Q96C24 671 aaPredicted RBP9.76□□□□□ -0.85
SND1-205ENST00000467238 PNMA3Q9UL41 463 aa9.76□□□□□ -0.85
SND1-205ENST00000467238 EMILIN1Q9Y6C2 1016 aa9.76□□□□□ -0.85
SND1-205ENST00000467238 PRR20EP86478 221 aa9.75□□□□□ -0.85
SND1-205ENST00000467238 PRR20CP86479 221 aa9.75□□□□□ -0.85
SND1-205ENST00000467238 PRR20DP86480 221 aa9.75□□□□□ -0.85
SND1-205ENST00000467238 PRR20BP86481 221 aa9.75□□□□□ -0.85
SND1-205ENST00000467238 PRR20AP86496 221 aa9.75□□□□□ -0.85
SND1-205ENST00000467238 SPRYD7Q5W111 196 aa9.75□□□□□ -0.85
SND1-205ENST00000467238 RAPGEF4Q8WZA2 1011 aa9.75□□□□□ -0.85
SND1-205ENST00000467238 UBR3Q6ZT12 1888 aa9.74□□□□□ -0.85
SND1-205ENST00000467238 TATP17735 454 aaPredicted RBP9.74□□□□□ -0.85
SND1-205ENST00000467238 PCDH11XQ9BZA7 1347 aa9.74□□□□□ -0.85
SND1-205ENST00000467238 PCDH11YQ9BZA8 1340 aa9.74□□□□□ -0.85
SND1-205ENST00000467238 VIRMAQ69YN4 1812 aaKnown RBP9.73□□□□□ -0.85
SND1-205ENST00000467238 SPDYE16A6NNV3 312 aaPredicted RBP9.73□□□□□ -0.85
SND1-205ENST00000467238 NBPF26B4DH59 902 aa9.73□□□□□ -0.85
SND1-205ENST00000467238 ST8SIA5O15466 376 aa9.73□□□□□ -0.85
SND1-205ENST00000467238 ZPR1O75312 459 aa9.73□□□□□ -0.85
SND1-205ENST00000467238 WASHC2AQ641Q2 1341 aa9.73□□□□□ -0.85
SND1-205ENST00000467238 PNPLA7Q6ZV29 1317 aa9.73□□□□□ -0.85
SND1-205ENST00000467238 CYP27B1O15528 508 aa9.72□□□□□ -0.85
SND1-205ENST00000467238 HSPA5P11021 654 aaKnown RBP9.72□□□□□ -0.85
SND1-205ENST00000467238 KCNQ4P56696 695 aa9.72□□□□□ -0.85
SND1-205ENST00000467238 EIF4G2P78344 907 aaKnown RBP eCLIP9.72□□□□□ -0.85
SND1-205ENST00000467238 NUDT18Q6ZVK8 323 aa9.72□□□□□ -0.85
SND1-205ENST00000467238 ZNF598Q86UK7 904 aaKnown RBP9.72□□□□□ -0.85
SND1-205ENST00000467238 SLC16A10Q8TF71 515 aa9.72□□□□□ -0.85
SND1-205ENST00000467238 SYT17Q9BSW7 474 aa9.72□□□□□ -0.85
SND1-205ENST00000467238 POLR3GLQ9BT43 218 aa9.72□□□□□ -0.85
SND1-205ENST00000467238 FHDC1Q9C0D6 1143 aaPredicted RBP9.72□□□□□ -0.85
SND1-205ENST00000467238 MAP3K5Q99683 1374 aa9.72□□□□□ -0.85
SND1-205ENST00000467238 FAM187AA6NFU0 413 aa9.71□□□□□ -0.86
SND1-205ENST00000467238 PPM1GO15355 546 aaPredicted RBP9.71□□□□□ -0.86
SND1-205ENST00000467238 YY1P25490 414 aa9.71□□□□□ -0.86
SND1-205ENST00000467238 E2F4Q16254 413 aa9.71□□□□□ -0.86
SND1-205ENST00000467238 ARXQ96QS3 562 aa9.71□□□□□ -0.86
SND1-205ENST00000467238 AAASQ9NRG9 546 aa9.71□□□□□ -0.86
SND1-205ENST00000467238 WDR70Q9NW82 654 aa9.71□□□□□ -0.86
SND1-205ENST00000467238 POLKQ9UBT6 870 aa9.71□□□□□ -0.86
SND1-205ENST00000467238 CCNL1Q9UK58 526 aaPredicted RBP9.71□□□□□ -0.86
SND1-205ENST00000467238 C4BP0C0L5 1744 aa9.7□□□□□ -0.86
SND1-205ENST00000467238 GDF9O60383 454 aa9.7□□□□□ -0.86
SND1-205ENST00000467238 LIAT1Q6ZQX7 453 aa9.7□□□□□ -0.86
SND1-205ENST00000467238 CCER1Q8TC90 406 aaPredicted RBP9.7□□□□□ -0.86
SND1-205ENST00000467238 EYA1Q99502 592 aa9.7□□□□□ -0.86
SND1-205ENST00000467238 TFCP2L1Q9NZI6 479 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms