RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 IGF1RP08069 1367 aa7.85□□□□□ -1.15
VPS13D-203ENST00000466732 ATXN7O15265 892 aaPredicted RBP7.85□□□□□ -1.15
VPS13D-203ENST00000466732 ADAMTS2O95450 1211 aa7.85□□□□□ -1.15
VPS13D-203ENST00000466732 MX2P20592 715 aa7.85□□□□□ -1.15
VPS13D-203ENST00000466732 NGLY1Q96IV0 654 aa7.85□□□□□ -1.15
VPS13D-203ENST00000466732 FOXO3O43524 673 aa7.84□□□□□ -1.15
VPS13D-203ENST00000466732 FGFR3P22607 806 aa7.84□□□□□ -1.15
VPS13D-203ENST00000466732 SAMD5Q5TGI4 173 aa7.84□□□□□ -1.15
VPS13D-203ENST00000466732 LRRC69Q6ZNQ3 347 aa7.84□□□□□ -1.15
VPS13D-203ENST00000466732 PRIMPOLQ96LW4 560 aa7.84□□□□□ -1.15
VPS13D-203ENST00000466732 NEUROD4Q9HD90 331 aa7.84□□□□□ -1.15
VPS13D-203ENST00000466732 DCDC2BA2VCK2 349 aa7.83□□□□□ -1.16
VPS13D-203ENST00000466732 PRMT3O60678 531 aa7.83□□□□□ -1.16
VPS13D-203ENST00000466732 PPP1R15AO75807 674 aaPredicted RBP7.83□□□□□ -1.16
VPS13D-203ENST00000466732 TNP2Q05952 138 aa7.83□□□□□ -1.16
VPS13D-203ENST00000466732 KHNYNO15037 678 aaKnown RBP7.82□□□□□ -1.16
VPS13D-203ENST00000466732 FAM157BP0CG42 384 aa7.82□□□□□ -1.16
VPS13D-203ENST00000466732 MAPTP10636 758 aaKnown RBP7.82□□□□□ -1.16
VPS13D-203ENST00000466732 CTBSQ01459 385 aa7.82□□□□□ -1.16
VPS13D-203ENST00000466732 OCLNQ16625 522 aa7.82□□□□□ -1.16
VPS13D-203ENST00000466732 ZNF385CQ66K41 422 aaPredicted RBP7.82□□□□□ -1.16
VPS13D-203ENST00000466732 WHAMMQ8TF30 809 aa7.82□□□□□ -1.16
VPS13D-203ENST00000466732 HSH2DQ96JZ2 352 aa7.82□□□□□ -1.16
VPS13D-203ENST00000466732 SUSD3Q96L08 255 aa7.82□□□□□ -1.16
VPS13D-203ENST00000466732 STK17AQ9UEE5 414 aa7.82□□□□□ -1.16
VPS13D-203ENST00000466732 HCN2Q9UL51 889 aa7.82□□□□□ -1.16
VPS13D-203ENST00000466732 NSFL1CQ9UNZ2 370 aaKnown RBP7.82□□□□□ -1.16
VPS13D-203ENST00000466732 C2CD2LO14523 706 aa7.81□□□□□ -1.16
VPS13D-203ENST00000466732 FKBP5Q13451 457 aaPredicted RBP7.81□□□□□ -1.16
VPS13D-203ENST00000466732 RTN1Q16799 776 aa7.81□□□□□ -1.16
VPS13D-203ENST00000466732 LYPD4Q6UWN0 246 aa7.81□□□□□ -1.16
VPS13D-203ENST00000466732 CLP1Q92989 425 aaKnown RBP7.81□□□□□ -1.16
VPS13D-203ENST00000466732 VTI1AQ96AJ9 217 aa7.81□□□□□ -1.16
VPS13D-203ENST00000466732 ARID3AQ99856 593 aa7.81□□□□□ -1.16
VPS13D-203ENST00000466732 ANKIB1Q9P2G1 1089 aa7.81□□□□□ -1.16
VPS13D-203ENST00000466732 EFSO43281 561 aa7.8□□□□□ -1.16
VPS13D-203ENST00000466732 BMP4P12644 408 aa7.8□□□□□ -1.16
VPS13D-203ENST00000466732 MAP2K3P46734 347 aa7.8□□□□□ -1.16
VPS13D-203ENST00000466732 ZNF280CQ8ND82 737 aa7.8□□□□□ -1.16
VPS13D-203ENST00000466732 SLAIN2Q9P270 581 aa7.8□□□□□ -1.16
VPS13D-203ENST00000466732 FAM181BA6NEQ2 426 aa7.79□□□□□ -1.16
VPS13D-203ENST00000466732 CELA2BP08218 269 aaPredicted RBP7.79□□□□□ -1.16
VPS13D-203ENST00000466732 CD33P20138 364 aa7.79□□□□□ -1.16
VPS13D-203ENST00000466732 SVOPQ8N4V2 548 aa7.79□□□□□ -1.16
VPS13D-203ENST00000466732 ACDQ96AP0 544 aa7.79□□□□□ -1.16
VPS13D-203ENST00000466732 QTRT2Q9H974 415 aaKnown RBP7.79□□□□□ -1.16
VPS13D-203ENST00000466732 STRN4Q9NRL3 753 aa7.79□□□□□ -1.16
VPS13D-203ENST00000466732 CXXC1Q9P0U4 656 aaPredicted RBP7.79□□□□□ -1.16
VPS13D-203ENST00000466732 LAMC2Q13753 1193 aa7.78□□□□□ -1.16
VPS13D-203ENST00000466732 HIF1AQ16665 826 aa7.78□□□□□ -1.16
VPS13D-203ENST00000466732 FAM182BQ5T319 152 aa7.78□□□□□ -1.16
VPS13D-203ENST00000466732 MARK1Q9P0L2 795 aa7.78□□□□□ -1.16
VPS13D-203ENST00000466732 MYO19Q96H55 970 aa7.77□□□□□ -1.17
VPS13D-203ENST00000466732 CEP63Q96MT8 703 aa7.77□□□□□ -1.17
VPS13D-203ENST00000466732 OXCT2Q9BYC2 517 aaPredicted RBP7.77□□□□□ -1.17
VPS13D-203ENST00000466732 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.77□□□□□ -1.17
VPS13D-203ENST00000466732 KLK14Q9P0G3 267 aa7.77□□□□□ -1.17
VPS13D-203ENST00000466732 BCS1LQ9Y276 419 aa7.77□□□□□ -1.17
VPS13D-203ENST00000466732 TMEM88BA6NKF7 163 aa7.76□□□□□ -1.17
VPS13D-203ENST00000466732 ARHGEF15O94989 841 aa7.76□□□□□ -1.17
VPS13D-203ENST00000466732 BCRP11274 1271 aa7.76□□□□□ -1.17
VPS13D-203ENST00000466732 TYRO3Q06418 890 aa7.76□□□□□ -1.17
VPS13D-203ENST00000466732 SFSWAPQ12872 951 aaKnown RBP7.76□□□□□ -1.17
VPS13D-203ENST00000466732 BTLAQ7Z6A9 289 aa7.76□□□□□ -1.17
VPS13D-203ENST00000466732 BRD7Q9NPI1 651 aa7.76□□□□□ -1.17
VPS13D-203ENST00000466732 TGFBR3LH3BV60 316 aa7.75□□□□□ -1.17
VPS13D-203ENST00000466732 ATP2B4P23634 1241 aa7.75□□□□□ -1.17
VPS13D-203ENST00000466732 MAP3K10Q02779 954 aa7.75□□□□□ -1.17
VPS13D-203ENST00000466732 DGKZQ13574 1117 aa7.75□□□□□ -1.17
VPS13D-203ENST00000466732 IER5Q5VY09 327 aa7.75□□□□□ -1.17
VPS13D-203ENST00000466732 MKNK1Q9BUB5 465 aa7.75□□□□□ -1.17
VPS13D-203ENST00000466732 LRFN2Q9ULH4 789 aa7.75□□□□□ -1.17
VPS13D-203ENST00000466732 GRIN2CQ14957 1233 aa7.74□□□□□ -1.17
VPS13D-203ENST00000466732 C11orf91Q3C1V1 193 aa7.74□□□□□ -1.17
VPS13D-203ENST00000466732 COX20Q5RI15 118 aa7.74□□□□□ -1.17
VPS13D-203ENST00000466732 CAPN12Q6ZSI9 719 aa7.74□□□□□ -1.17
VPS13D-203ENST00000466732 COL26A1Q96A83 441 aa7.74□□□□□ -1.17
VPS13D-203ENST00000466732 DMGDHQ9UI17 866 aaKnown RBP7.74□□□□□ -1.17
VPS13D-203ENST00000466732 GDF2Q9UK05 429 aaPredicted RBP7.74□□□□□ -1.17
VPS13D-203ENST00000466732 ADAMTS8Q9UP79 889 aa7.74□□□□□ -1.17
VPS13D-203ENST00000466732 OIP5O43482 229 aa7.73□□□□□ -1.17
VPS13D-203ENST00000466732 PTCD1O75127 700 aaKnown RBP7.73□□□□□ -1.17
VPS13D-203ENST00000466732 ARAFP10398 606 aa7.73□□□□□ -1.17
VPS13D-203ENST00000466732 KCNQ4P56696 695 aa7.73□□□□□ -1.17
VPS13D-203ENST00000466732 C1orf229Q6ZS94 237 aaPredicted RBP7.73□□□□□ -1.17
VPS13D-203ENST00000466732 GOLGA6L1Q8N7Z2 621 aa7.73□□□□□ -1.17
VPS13D-203ENST00000466732 SAP130Q9H0E3 1048 aa7.73□□□□□ -1.17
VPS13D-203ENST00000466732 LRRC4BQ9NT99 713 aa7.73□□□□□ -1.17
VPS13D-203ENST00000466732 GGA1Q9UJY5 639 aa7.73□□□□□ -1.17
VPS13D-203ENST00000466732 PRR12Q9ULL5 1215 aa7.73□□□□□ -1.17
VPS13D-203ENST00000466732 KCNH4Q9UQ05 1017 aa7.73□□□□□ -1.17
VPS13D-203ENST00000466732 CARNS1A5YM72 827 aa7.72□□□□□ -1.17
VPS13D-203ENST00000466732 NAA30Q147X3 362 aaPredicted RBP7.72□□□□□ -1.17
VPS13D-203ENST00000466732 ZNF468Q5VIY5 522 aaPredicted RBP7.72□□□□□ -1.17
VPS13D-203ENST00000466732 C16orf46Q6P387 395 aa7.72□□□□□ -1.17
VPS13D-203ENST00000466732 SLC30A3Q99726 388 aa7.72□□□□□ -1.17
VPS13D-203ENST00000466732 AVENQ9NQS1 362 aaPredicted RBP7.72□□□□□ -1.17
VPS13D-203ENST00000466732 ENAMQ9NRM1 1142 aa7.72□□□□□ -1.17
VPS13D-203ENST00000466732 KLF15Q9UIH9 416 aa7.72□□□□□ -1.17
VPS13D-203ENST00000466732 DNMT3AQ9Y6K1 912 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms