RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 NUCB1Q02818 461 aa11.95□□□□□ -0.5
SRPRB-202ENST00000466636 LINS1Q8NG48 757 aa11.95□□□□□ -0.5
SRPRB-202ENST00000466636 SLC4A9Q96Q91 983 aa11.95□□□□□ -0.5
SRPRB-202ENST00000466636 TEX13AQ9BXU3 409 aaPredicted RBP11.95□□□□□ -0.5
SRPRB-202ENST00000466636 DCTPP1Q9H773 170 aa11.95□□□□□ -0.5
SRPRB-202ENST00000466636 A1BGP04217 495 aa11.94□□□□□ -0.5
SRPRB-202ENST00000466636 UBTFL1P0CB47 393 aaPredicted RBP11.94□□□□□ -0.5
SRPRB-202ENST00000466636 PDE4AP27815 886 aa11.94□□□□□ -0.5
SRPRB-202ENST00000466636 RIC3Q7Z5B4 369 aa11.94□□□□□ -0.5
SRPRB-202ENST00000466636 SYTL4Q96C24 671 aaPredicted RBP11.94□□□□□ -0.5
SRPRB-202ENST00000466636 GJD4Q96KN9 370 aaPredicted RBP11.94□□□□□ -0.5
SRPRB-202ENST00000466636 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
SRPRB-202ENST00000466636 METTL22Q9BUU2 404 aaPredicted RBP11.94□□□□□ -0.5
SRPRB-202ENST00000466636 LRRFIP2Q9Y608 721 aaKnown RBP11.94□□□□□ -0.5
SRPRB-202ENST00000466636 UTYO14607 1347 aa11.93□□□□□ -0.5
SRPRB-202ENST00000466636 NBPF7P0C2Y1 421 aaPredicted RBP11.93□□□□□ -0.5
SRPRB-202ENST00000466636 ATP8B2P98198 1209 aa11.93□□□□□ -0.5
SRPRB-202ENST00000466636 CWF19L2Q2TBE0 894 aaKnown RBP11.93□□□□□ -0.5
SRPRB-202ENST00000466636 ANKRD13DQ6ZTN6 518 aa11.93□□□□□ -0.5
SRPRB-202ENST00000466636 CHD1LQ86WJ1 897 aa11.93□□□□□ -0.5
SRPRB-202ENST00000466636 PLBD2Q8NHP8 589 aa11.93□□□□□ -0.5
SRPRB-202ENST00000466636 ACSBG1Q96GR2 724 aa11.93□□□□□ -0.5
SRPRB-202ENST00000466636 TRPC5Q9UL62 973 aaPredicted RBP11.93□□□□□ -0.5
SRPRB-202ENST00000466636 DOT1LQ8TEK3 1739 aa11.93□□□□□ -0.5
SRPRB-202ENST00000466636 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
SRPRB-202ENST00000466636 HMMRO75330 724 aa11.92□□□□□ -0.5
SRPRB-202ENST00000466636 IGKV5-2P06315 115 aa11.92□□□□□ -0.5
SRPRB-202ENST00000466636 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
SRPRB-202ENST00000466636 CACNA1FO60840 1977 aa11.91□□□□□ -0.5
SRPRB-202ENST00000466636 NEURL1BA8MQ27 555 aa11.91□□□□□ -0.5
SRPRB-202ENST00000466636 STARD3NLO95772 234 aa11.91□□□□□ -0.5
SRPRB-202ENST00000466636 CYP19A1P11511 503 aaPredicted RBP11.91□□□□□ -0.5
SRPRB-202ENST00000466636 TTLL7Q6ZT98 887 aa11.91□□□□□ -0.5
SRPRB-202ENST00000466636 MYD88Q99836 296 aa11.91□□□□□ -0.5
SRPRB-202ENST00000466636 BACH2Q9BYV9 841 aa11.91□□□□□ -0.5
SRPRB-202ENST00000466636 RBM19Q9Y4C8 960 aaKnown RBP11.91□□□□□ -0.5
SRPRB-202ENST00000466636 PNMA6EA0A0J9YXQ4 647 aa11.9□□□□□ -0.5
SRPRB-202ENST00000466636 SPDYE2BA6NHP3 402 aa11.9□□□□□ -0.5
SRPRB-202ENST00000466636 GRM8O00222 908 aa11.9□□□□□ -0.5
SRPRB-202ENST00000466636 KCNQ2O43526 872 aa11.9□□□□□ -0.5
SRPRB-202ENST00000466636 SPDYE6P0CI01 402 aa11.9□□□□□ -0.5
SRPRB-202ENST00000466636 NEXNQ0ZGT2 675 aa11.9□□□□□ -0.5
SRPRB-202ENST00000466636 SPDYE2Q495Y8 402 aa11.9□□□□□ -0.5
SRPRB-202ENST00000466636 ANKRD45Q5TZF3 282 aa11.9□□□□□ -0.5
SRPRB-202ENST00000466636 SSH3Q8TE77 659 aa11.9□□□□□ -0.5
SRPRB-202ENST00000466636 LNPKQ9C0E8 428 aa11.9□□□□□ -0.5
SRPRB-202ENST00000466636 ITGB4P16144 1822 aa11.89□□□□□ -0.51
SRPRB-202ENST00000466636 A0A0G2JS52 829 aa11.89□□□□□ -0.51
SRPRB-202ENST00000466636 MYT1Q01538 1121 aa11.89□□□□□ -0.51
SRPRB-202ENST00000466636 MTX1Q13505 466 aa11.89□□□□□ -0.51
SRPRB-202ENST00000466636 GCKRQ14397 625 aa11.89□□□□□ -0.51
SRPRB-202ENST00000466636 FAM161AQ3B820 660 aa11.89□□□□□ -0.51
SRPRB-202ENST00000466636 C8orf34Q49A92 452 aa11.89□□□□□ -0.51
SRPRB-202ENST00000466636 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
SRPRB-202ENST00000466636 SMARCC1Q92922 1105 aaPredicted RBP11.89□□□□□ -0.51
SRPRB-202ENST00000466636 C9orf78Q9NZ63 289 aaPredicted RBP11.89□□□□□ -0.51
SRPRB-202ENST00000466636 SSUH2Q9Y2M2 353 aa11.89□□□□□ -0.51
SRPRB-202ENST00000466636 PALLDQ8WX93 1383 aa11.89□□□□□ -0.51
SRPRB-202ENST00000466636 LOC102724428A0A0B4J2F2 783 aa11.88□□□□□ -0.51
SRPRB-202ENST00000466636 SIK1P57059 783 aa11.88□□□□□ -0.51
SRPRB-202ENST00000466636 PPP1R42Q7Z4L9 355 aa11.88□□□□□ -0.51
SRPRB-202ENST00000466636 SP7Q8TDD2 431 aaPredicted RBP11.88□□□□□ -0.51
SRPRB-202ENST00000466636 KAZALD1Q96I82 304 aa11.88□□□□□ -0.51
SRPRB-202ENST00000466636 SUCLG2Q96I99 432 aa11.88□□□□□ -0.51
SRPRB-202ENST00000466636 HDAC5Q9UQL6 1122 aa11.88□□□□□ -0.51
SRPRB-202ENST00000466636 TJP1Q07157 1748 aa11.88□□□□□ -0.51
SRPRB-202ENST00000466636 CICQ96RK0 1608 aaPredicted RBP11.87□□□□□ -0.51
SRPRB-202ENST00000466636 ITPK1Q13572 414 aa11.87□□□□□ -0.51
SRPRB-202ENST00000466636 SEPT12Q8IYM1 358 aa11.87□□□□□ -0.51
SRPRB-202ENST00000466636 ZBTB3Q9H5J0 574 aa11.87□□□□□ -0.51
SRPRB-202ENST00000466636 QTRT2Q9H974 415 aaKnown RBP11.87□□□□□ -0.51
SRPRB-202ENST00000466636 ZBTB1Q9Y2K1 713 aa11.87□□□□□ -0.51
SRPRB-202ENST00000466636 COL15A1P39059 1388 aa11.87□□□□□ -0.51
SRPRB-202ENST00000466636 ATP5J2-PTCD1G3V325 749 aa11.86□□□□□ -0.51
SRPRB-202ENST00000466636 ATP6V1AP38606 617 aa11.86□□□□□ -0.51
SRPRB-202ENST00000466636 IL6STP40189 918 aaPredicted RBP11.86□□□□□ -0.51
SRPRB-202ENST00000466636 CASP7P55210 303 aa11.86□□□□□ -0.51
SRPRB-202ENST00000466636 INTS5Q6P9B9 1019 aaKnown RBP11.86□□□□□ -0.51
SRPRB-202ENST00000466636 PTF1AQ7RTS3 328 aa11.86□□□□□ -0.51
SRPRB-202ENST00000466636 KLHL34Q8N239 644 aa11.86□□□□□ -0.51
SRPRB-202ENST00000466636 ISCA1Q9BUE6 129 aa11.86□□□□□ -0.51
SRPRB-202ENST00000466636 MAP3K15Q6ZN16 1313 aa11.86□□□□□ -0.51
SRPRB-202ENST00000466636 H7C1W4 665 aa11.85□□□□□ -0.51
SRPRB-202ENST00000466636 SRGAP3O43295 1099 aa11.85□□□□□ -0.51
SRPRB-202ENST00000466636 KIF6Q6ZMV9 814 aa11.85□□□□□ -0.51
SRPRB-202ENST00000466636 CCDC87Q9NVE4 849 aa11.85□□□□□ -0.51
SRPRB-202ENST00000466636 EXOC6BQ9Y2D4 811 aa11.85□□□□□ -0.51
SRPRB-202ENST00000466636 NUP188Q5SRE5 1749 aa11.84□□□□□ -0.51
SRPRB-202ENST00000466636 SMARCA5O60264 1052 aaPredicted RBP11.84□□□□□ -0.51
SRPRB-202ENST00000466636 CRKLP46109 303 aaKnown RBP11.84□□□□□ -0.51
SRPRB-202ENST00000466636 EIF5P55010 431 aaKnown RBP11.84□□□□□ -0.51
SRPRB-202ENST00000466636 TRIM28Q13263 835 aaKnown RBP11.84□□□□□ -0.51
SRPRB-202ENST00000466636 TCIRG1Q13488 830 aa11.84□□□□□ -0.51
SRPRB-202ENST00000466636 EPHA10Q5JZY3 1008 aa11.84□□□□□ -0.51
SRPRB-202ENST00000466636 FAM182BQ5T319 152 aa11.84□□□□□ -0.51
SRPRB-202ENST00000466636 PLEKHM2Q8IWE5 1019 aa11.84□□□□□ -0.51
SRPRB-202ENST00000466636 CCDC191Q8NCU4 936 aa11.84□□□□□ -0.51
SRPRB-202ENST00000466636 BICC1Q9H694 974 aaKnown RBP11.84□□□□□ -0.51
SRPRB-202ENST00000466636 CWC25Q9NXE8 425 aaPredicted RBP11.84□□□□□ -0.51
SRPRB-202ENST00000466636 NOP58Q9Y2X3 529 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms