RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 PDE4DIPQ5VU43 2346 aa12.67□□□□□ -0.38
ABCF3-205ENST00000466416 NPHP1O15259 732 aa12.66□□□□□ -0.38
ABCF3-205ENST00000466416 ST5P78524 1137 aa12.66□□□□□ -0.38
ABCF3-205ENST00000466416 FKBP4Q02790 459 aaKnown RBP eCLIP12.66□□□□□ -0.38
ABCF3-205ENST00000466416 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
ABCF3-205ENST00000466416 AEBP1Q8IUX7 1158 aa12.66□□□□□ -0.38
ABCF3-205ENST00000466416 CCDC24Q8N4L8 307 aa12.66□□□□□ -0.38
ABCF3-205ENST00000466416 CNBD1Q8NA66 436 aa12.66□□□□□ -0.38
ABCF3-205ENST00000466416 SETDB2Q96T68 719 aa12.66□□□□□ -0.38
ABCF3-205ENST00000466416 ZNF541Q9H0D2 1346 aa12.65□□□□□ -0.38
ABCF3-205ENST00000466416 FZD9O00144 591 aa12.65□□□□□ -0.38
ABCF3-205ENST00000466416 SULT6B1Q6IMI4 303 aa12.65□□□□□ -0.38
ABCF3-205ENST00000466416 GPC2Q8N158 579 aa12.65□□□□□ -0.38
ABCF3-205ENST00000466416 LGR6Q9HBX8 967 aa12.65□□□□□ -0.38
ABCF3-205ENST00000466416 RNF123Q5XPI4 1314 aa12.64□□□□□ -0.39
ABCF3-205ENST00000466416 RNMTO43148 476 aaKnown RBP12.64□□□□□ -0.39
ABCF3-205ENST00000466416 CYP4F22Q6NT55 531 aa12.64□□□□□ -0.39
ABCF3-205ENST00000466416 RTKN2Q8IZC4 609 aa12.64□□□□□ -0.39
ABCF3-205ENST00000466416 TEX13AQ9BXU3 409 aaPredicted RBP12.64□□□□□ -0.39
ABCF3-205ENST00000466416 ZNF277Q9NRM2 450 aaPredicted RBP12.64□□□□□ -0.39
ABCF3-205ENST00000466416 ADAMTSL1Q8N6G6 1762 aa12.64□□□□□ -0.39
ABCF3-205ENST00000466416 SLX4Q8IY92 1834 aa12.63□□□□□ -0.39
ABCF3-205ENST00000466416 NPR1P16066 1061 aa12.63□□□□□ -0.39
ABCF3-205ENST00000466416 GRM1Q13255 1194 aa12.63□□□□□ -0.39
ABCF3-205ENST00000466416 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
ABCF3-205ENST00000466416 TBC1D2BQ9UPU7 963 aa12.63□□□□□ -0.39
ABCF3-205ENST00000466416 TLL2Q9Y6L7 1015 aa12.63□□□□□ -0.39
ABCF3-205ENST00000466416 ANKRD31Q8N7Z5 1873 aa12.63□□□□□ -0.39
ABCF3-205ENST00000466416 IL6STP40189 918 aaPredicted RBP12.62□□□□□ -0.39
ABCF3-205ENST00000466416 DGKZQ13574 1117 aa12.62□□□□□ -0.39
ABCF3-205ENST00000466416 NPM2Q86SE8 214 aaKnown RBP12.62□□□□□ -0.39
ABCF3-205ENST00000466416 LMOD1P29536 600 aaPredicted RBP12.61□□□□□ -0.39
ABCF3-205ENST00000466416 IARSP41252 1262 aaKnown RBP12.61□□□□□ -0.39
ABCF3-205ENST00000466416 CST9Q5W186 159 aa12.61□□□□□ -0.39
ABCF3-205ENST00000466416 JDP2Q8WYK2 163 aa12.61□□□□□ -0.39
ABCF3-205ENST00000466416 THSD7BQ9C0I4 1608 aa12.61□□□□□ -0.39
ABCF3-205ENST00000466416 SCN11AQ9UI33 1791 aa12.61□□□□□ -0.39
ABCF3-205ENST00000466416 KLRG2A4D1S0 409 aaPredicted RBP12.6□□□□□ -0.39
ABCF3-205ENST00000466416 AOC2O75106 756 aa12.6□□□□□ -0.39
ABCF3-205ENST00000466416 BRPF1P55201 1214 aaPredicted RBP12.6□□□□□ -0.39
ABCF3-205ENST00000466416 USP50Q70EL3 339 aaPredicted RBP12.6□□□□□ -0.39
ABCF3-205ENST00000466416 TTC5Q8N0Z6 440 aa12.6□□□□□ -0.39
ABCF3-205ENST00000466416 SYNE4Q8N205 404 aa12.6□□□□□ -0.39
ABCF3-205ENST00000466416 HHIPL1Q96JK4 782 aa12.6□□□□□ -0.39
ABCF3-205ENST00000466416 COL11A2P13942 1736 aaPredicted RBP12.59□□□□□ -0.39
ABCF3-205ENST00000466416 ALDH1B1P30837 517 aa12.59□□□□□ -0.39
ABCF3-205ENST00000466416 EIF6P56537 245 aaKnown RBP12.59□□□□□ -0.39
ABCF3-205ENST00000466416 FMR1Q06787 632 aaKnown RBP eCLIP12.59□□□□□ -0.39
ABCF3-205ENST00000466416 PRPF38BQ5VTL8 546 aaKnown RBP12.59□□□□□ -0.39
ABCF3-205ENST00000466416 ZNF330Q9Y3S2 320 aaPredicted RBP12.59□□□□□ -0.39
ABCF3-205ENST00000466416 MRC1P22897 1456 aa12.59□□□□□ -0.39
ABCF3-205ENST00000466416 CAMTA2O94983 1202 aa12.58□□□□□ -0.4
ABCF3-205ENST00000466416 IL13P35225 146 aa12.58□□□□□ -0.4
ABCF3-205ENST00000466416 CLEC4GQ6UXB4 293 aa12.58□□□□□ -0.4
ABCF3-205ENST00000466416 SAPCD2Q86UD0 394 aa12.58□□□□□ -0.4
ABCF3-205ENST00000466416 NBPF5PQ86XG9 351 aaPredicted RBP12.58□□□□□ -0.4
ABCF3-205ENST00000466416 PSMD1Q99460 953 aa12.58□□□□□ -0.4
ABCF3-205ENST00000466416 GJA3Q9Y6H8 435 aa12.58□□□□□ -0.4
ABCF3-205ENST00000466416 TRAF5O00463 557 aa12.57□□□□□ -0.4
ABCF3-205ENST00000466416 EPS15P42566 896 aa12.57□□□□□ -0.4
ABCF3-205ENST00000466416 TPTE2Q6XPS3 522 aa12.57□□□□□ -0.4
ABCF3-205ENST00000466416 ARFGEF2Q9Y6D5 1785 aa12.56□□□□□ -0.4
ABCF3-205ENST00000466416 CASP8AP2Q9UKL3 1982 aa12.56□□□□□ -0.4
ABCF3-205ENST00000466416 SCNN1DP51172 638 aa12.56□□□□□ -0.4
ABCF3-205ENST00000466416 CC2D2BQ6DHV5 1058 aa12.56□□□□□ -0.4
ABCF3-205ENST00000466416 OLFM4Q6UX06 510 aa12.56□□□□□ -0.4
ABCF3-205ENST00000466416 ZNF496Q96IT1 587 aaPredicted RBP12.56□□□□□ -0.4
ABCF3-205ENST00000466416 HEG1Q9ULI3 1381 aa12.56□□□□□ -0.4
ABCF3-205ENST00000466416 TNRC18O15417 2968 aaPredicted RBP12.55□□□□□ -0.4
ABCF3-205ENST00000466416 CELF2O95319 508 aaKnown RBP12.55□□□□□ -0.4
ABCF3-205ENST00000466416 GRIPAP1Q4V328 841 aa12.55□□□□□ -0.4
ABCF3-205ENST00000466416 CIAPIN1Q6FI81 312 aa12.55□□□□□ -0.4
ABCF3-205ENST00000466416 ZNF790Q6PG37 636 aa12.55□□□□□ -0.4
ABCF3-205ENST00000466416 MORC1Q86VD1 984 aa12.55□□□□□ -0.4
ABCF3-205ENST00000466416 DZIP3Q86Y13 1208 aaKnown RBP12.55□□□□□ -0.4
ABCF3-205ENST00000466416 LTBP1Q14766 1721 aa12.54□□□□□ -0.4
ABCF3-205ENST00000466416 A1BGP04217 495 aa12.54□□□□□ -0.4
ABCF3-205ENST00000466416 NOGQ13253 232 aa12.54□□□□□ -0.4
ABCF3-205ENST00000466416 MTHFSDQ2M296 383 aaKnown RBP12.54□□□□□ -0.4
ABCF3-205ENST00000466416 ZNF652Q9Y2D9 606 aa12.54□□□□□ -0.4
ABCF3-205ENST00000466416 RGL2O15211 777 aa12.53□□□□□ -0.4
ABCF3-205ENST00000466416 SOX10P56693 466 aa12.53□□□□□ -0.4
ABCF3-205ENST00000466416 FMNL2Q96PY5 1086 aa12.53□□□□□ -0.4
ABCF3-205ENST00000466416 ADARB2Q9NS39 739 aaKnown RBP12.53□□□□□ -0.4
ABCF3-205ENST00000466416 SCN7AQ01118 1682 aa12.53□□□□□ -0.4
ABCF3-205ENST00000466416 CACNA1SQ13698 1873 aa12.53□□□□□ -0.4
ABCF3-205ENST00000466416 TRPM7Q96QT4 1865 aa12.53□□□□□ -0.4
ABCF3-205ENST00000466416 TEFQ10587 303 aa12.52□□□□□ -0.41
ABCF3-205ENST00000466416 LARGE2Q8N3Y3 721 aa12.52□□□□□ -0.41
ABCF3-205ENST00000466416 POLR3GLQ9BT43 218 aa12.52□□□□□ -0.41
ABCF3-205ENST00000466416 HMOX1P09601 288 aa12.51□□□□□ -0.41
ABCF3-205ENST00000466416 PANK3Q9H999 370 aa12.51□□□□□ -0.41
ABCF3-205ENST00000466416 SAGE1Q9NXZ1 904 aa12.51□□□□□ -0.41
ABCF3-205ENST00000466416 PGAP2Q9UHJ9 254 aa12.51□□□□□ -0.41
ABCF3-205ENST00000466416 UBR2Q8IWV8 1755 aa12.51□□□□□ -0.41
ABCF3-205ENST00000466416 ZC3H15Q8WU90 426 aaKnown RBP12.5□□□□□ -0.41
ABCF3-205ENST00000466416 GCC1Q96CN9 775 aa12.5□□□□□ -0.41
ABCF3-205ENST00000466416 GPRC5DQ9NZD1 345 aa12.5□□□□□ -0.41
ABCF3-205ENST00000466416 NIP7Q9Y221 180 aaKnown RBP eCLIP12.5□□□□□ -0.41
ABCF3-205ENST00000466416 SNED1Q8TER0 1413 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms