RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 PLIN1O60240 522 aa14.21□□□□□ -0.13
VCP-204ENST00000466100 CAMTA2O94983 1202 aa14.21□□□□□ -0.13
VCP-204ENST00000466100 SLC15A2Q16348 729 aa14.21□□□□□ -0.13
VCP-204ENST00000466100 ZKSCAN2Q63HK3 967 aa14.21□□□□□ -0.13
VCP-204ENST00000466100 KSR2Q6VAB6 950 aa14.21□□□□□ -0.13
VCP-204ENST00000466100 DZIP3Q86Y13 1208 aaKnown RBP14.21□□□□□ -0.13
VCP-204ENST00000466100 PLBD2Q8NHP8 589 aa14.21□□□□□ -0.13
VCP-204ENST00000466100 FRAT1Q92837 279 aaPredicted RBP14.21□□□□□ -0.13
VCP-204ENST00000466100 ZNF330Q9Y3S2 320 aaPredicted RBP14.21□□□□□ -0.13
VCP-204ENST00000466100 SUPT16HQ9Y5B9 1047 aaKnown RBP14.21□□□□□ -0.13
VCP-204ENST00000466100 ATP10DQ9P241 1426 aa14.21□□□□□ -0.13
VCP-204ENST00000466100 A0A087WZG4 1122 aa14.2□□□□□ -0.14
VCP-204ENST00000466100 PI4KAP2A4QPH2 592 aa14.2□□□□□ -0.14
VCP-204ENST00000466100 IPO8O15397 1037 aaKnown RBP14.2□□□□□ -0.14
VCP-204ENST00000466100 ANKRD13DQ6ZTN6 518 aa14.2□□□□□ -0.14
VCP-204ENST00000466100 PI4KAP1Q8N8J0 262 aa14.2□□□□□ -0.14
VCP-204ENST00000466100 ARHGEF1Q92888 912 aaKnown RBP14.2□□□□□ -0.14
VCP-204ENST00000466100 API5Q9BZZ5 524 aaKnown RBP14.2□□□□□ -0.14
VCP-204ENST00000466100 STK32BQ9NY57 414 aa14.2□□□□□ -0.14
VCP-204ENST00000466100 NARFQ9UHQ1 456 aa14.2□□□□□ -0.14
VCP-204ENST00000466100 TBC1D2BQ9UPU7 963 aa14.2□□□□□ -0.14
VCP-204ENST00000466100 USP42Q9H9J4 1324 aaKnown RBP14.19□□□□□ -0.14
VCP-204ENST00000466100 ERVV-1B6SEH8 477 aa14.19□□□□□ -0.14
VCP-204ENST00000466100 F6X3S4 739 aa14.19□□□□□ -0.14
VCP-204ENST00000466100 RGL2O15211 777 aa14.19□□□□□ -0.14
VCP-204ENST00000466100 PHF14O94880 888 aa14.19□□□□□ -0.14
VCP-204ENST00000466100 DDX58O95786 925 aaKnown RBP14.19□□□□□ -0.14
VCP-204ENST00000466100 RLBP1P12271 317 aa14.19□□□□□ -0.14
VCP-204ENST00000466100 TRAPPC3LQ5T215 181 aa14.19□□□□□ -0.14
VCP-204ENST00000466100 KIF6Q6ZMV9 814 aa14.19□□□□□ -0.14
VCP-204ENST00000466100 ZBTB3Q9H5J0 574 aa14.19□□□□□ -0.14
VCP-204ENST00000466100 BCL2L12Q9HB09 334 aa14.19□□□□□ -0.14
VCP-204ENST00000466100 TFCP2L1Q9NZI6 479 aa14.19□□□□□ -0.14
VCP-204ENST00000466100 MAP3K2Q9Y2U5 619 aa14.19□□□□□ -0.14
VCP-204ENST00000466100 HLFQ16534 295 aa14.18□□□□□ -0.14
VCP-204ENST00000466100 C20orf194Q5TEA3 1177 aa14.18□□□□□ -0.14
VCP-204ENST00000466100 COL23A1Q86Y22 540 aaPredicted RBP14.18□□□□□ -0.14
VCP-204ENST00000466100 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.18□□□□□ -0.14
VCP-204ENST00000466100 DNAAF4Q8WXU2 420 aa14.18□□□□□ -0.14
VCP-204ENST00000466100 SRP68Q9UHB9 627 aaKnown RBP14.18□□□□□ -0.14
VCP-204ENST00000466100 IBTKQ9P2D0 1353 aaPredicted RBP14.18□□□□□ -0.14
VCP-204ENST00000466100 PDE3AQ14432 1141 aa14.17□□□□□ -0.14
VCP-204ENST00000466100 GIGYF2Q6Y7W6 1299 aaKnown RBP14.17□□□□□ -0.14
VCP-204ENST00000466100 RIC3Q7Z5B4 369 aa14.17□□□□□ -0.14
VCP-204ENST00000466100 FLAD1Q8NFF5 587 aa14.17□□□□□ -0.14
VCP-204ENST00000466100 METTL22Q9BUU2 404 aaPredicted RBP14.17□□□□□ -0.14
VCP-204ENST00000466100 NRXN2Q9P2S2 1712 aa14.17□□□□□ -0.14
VCP-204ENST00000466100 LAMB2P55268 1798 aa14.17□□□□□ -0.14
VCP-204ENST00000466100 IGKV5-2P06315 115 aa14.16□□□□□ -0.14
VCP-204ENST00000466100 BEND3Q5T5X7 828 aa14.16□□□□□ -0.14
VCP-204ENST00000466100 USPL1Q5W0Q7 1092 aa14.16□□□□□ -0.14
VCP-204ENST00000466100 INTS3Q68E01 1043 aaKnown RBP14.16□□□□□ -0.14
VCP-204ENST00000466100 NPM2Q86SE8 214 aaKnown RBP14.16□□□□□ -0.14
VCP-204ENST00000466100 DZIP1LQ8IYY4 767 aaKnown RBP14.16□□□□□ -0.14
VCP-204ENST00000466100 PANK1Q8TE04 598 aa14.16□□□□□ -0.14
VCP-204ENST00000466100 CLUAP1Q96AJ1 413 aa14.16□□□□□ -0.14
VCP-204ENST00000466100 ISCA1Q9BUE6 129 aa14.16□□□□□ -0.14
VCP-204ENST00000466100 GYS1P13807 737 aa14.15□□□□□ -0.14
VCP-204ENST00000466100 RFC4P35249 363 aa14.15□□□□□ -0.14
VCP-204ENST00000466100 TCIRG1Q13488 830 aa14.15□□□□□ -0.14
VCP-204ENST00000466100 CLEC4GQ6UXB4 293 aa14.15□□□□□ -0.14
VCP-204ENST00000466100 TMEM57Q8N5G2 664 aa14.15□□□□□ -0.14
VCP-204ENST00000466100 ZPR1O75312 459 aa14.14□□□□□ -0.15
VCP-204ENST00000466100 MS4A1P11836 297 aa14.14□□□□□ -0.15
VCP-204ENST00000466100 TRIM28Q13263 835 aaKnown RBP14.14□□□□□ -0.15
VCP-204ENST00000466100 FTSJ3Q8IY81 847 aaKnown RBP14.14□□□□□ -0.15
VCP-204ENST00000466100 ZNF34Q8IZ26 560 aa14.14□□□□□ -0.15
VCP-204ENST00000466100 LINS1Q8NG48 757 aa14.14□□□□□ -0.15
VCP-204ENST00000466100 ARXQ96QS3 562 aa14.14□□□□□ -0.15
VCP-204ENST00000466100 MYD88Q99836 296 aa14.14□□□□□ -0.15
VCP-204ENST00000466100 PDGFDQ9GZP0 370 aaPredicted RBP14.14□□□□□ -0.15
VCP-204ENST00000466100 DDX60Q8IY21 1712 aaKnown RBP14.14□□□□□ -0.15
VCP-204ENST00000466100 SRCAPQ6ZRS2 3230 aa14.14□□□□□ -0.15
VCP-204ENST00000466100 UBN2Q6ZU65 1347 aa14.14□□□□□ -0.15
VCP-204ENST00000466100 MYH3P11055 1940 aa14.13□□□□□ -0.15
VCP-204ENST00000466100 NEURL1BA8MQ27 555 aa14.13□□□□□ -0.15
VCP-204ENST00000466100 CCT4P50991 539 aaKnown RBP14.13□□□□□ -0.15
VCP-204ENST00000466100 FKBP8Q14318 412 aa14.13□□□□□ -0.15
VCP-204ENST00000466100 HSP90AB3PQ58FF7 597 aa14.13□□□□□ -0.15
VCP-204ENST00000466100 SLC4A10Q6U841 1118 aa14.13□□□□□ -0.15
VCP-204ENST00000466100 ZNF652Q9Y2D9 606 aa14.13□□□□□ -0.15
VCP-204ENST00000466100 ATP5J2-PTCD1G3V325 749 aa14.12□□□□□ -0.15
VCP-204ENST00000466100 SOCS7O14512 581 aa14.12□□□□□ -0.15
VCP-204ENST00000466100 ALDH1L1O75891 902 aa14.12□□□□□ -0.15
VCP-204ENST00000466100 MVPQ14764 893 aaKnown RBP14.12□□□□□ -0.15
VCP-204ENST00000466100 CWF19L2Q2TBE0 894 aaKnown RBP14.12□□□□□ -0.15
VCP-204ENST00000466100 TBC1D9BQ66K14 1250 aa14.12□□□□□ -0.15
VCP-204ENST00000466100 SRCIN1Q9C0H9 1055 aa14.12□□□□□ -0.15
VCP-204ENST00000466100 NEXNQ0ZGT2 675 aa14.11□□□□□ -0.15
VCP-204ENST00000466100 NLRP10Q86W26 655 aa14.11□□□□□ -0.15
VCP-204ENST00000466100 ANKRD31Q8N7Z5 1873 aa14.11□□□□□ -0.15
VCP-204ENST00000466100 COG6Q9Y2V7 657 aa14.11□□□□□ -0.15
VCP-204ENST00000466100 GPTP24298 496 aa14.1□□□□□ -0.15
VCP-204ENST00000466100 TM4SF1P30408 202 aa14.1□□□□□ -0.15
VCP-204ENST00000466100 GCKRQ14397 625 aa14.1□□□□□ -0.15
VCP-204ENST00000466100 R3HDM1Q15032 1099 aaKnown RBP14.1□□□□□ -0.15
VCP-204ENST00000466100 CCDC191Q8NCU4 936 aa14.1□□□□□ -0.15
VCP-204ENST00000466100 TNRC6CQ9HCJ0 1690 aaKnown RBP14.1□□□□□ -0.15
VCP-204ENST00000466100 UTYO14607 1347 aa14.1□□□□□ -0.15
VCP-204ENST00000466100 CASP7P55210 303 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms