RNA–Protein interactions for RNA: ENST00000466058.1

KDM3A-209, Transcript of lysine demethylase 3A, humanhuman

TSL 4

Gene KDM3A, Length 448 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-209ENST00000466058 ITPK1Q13572 414 aa8.13□□□□□ -1.11
KDM3A-209ENST00000466058 ARHGEF1Q92888 912 aaKnown RBP8.13□□□□□ -1.11
KDM3A-209ENST00000466058 HPS5Q9UPZ3 1129 aa8.13□□□□□ -1.11
KDM3A-209ENST00000466058 MAP2P11137 1827 aaKnown RBP8.13□□□□□ -1.11
KDM3A-209ENST00000466058 TTC21BQ7Z4L5 1316 aa8.12□□□□□ -1.11
KDM3A-209ENST00000466058 LOC102724428A0A0B4J2F2 783 aa8.12□□□□□ -1.11
KDM3A-209ENST00000466058 SIK1P57059 783 aa8.12□□□□□ -1.11
KDM3A-209ENST00000466058 SMARCC1Q92922 1105 aaPredicted RBP8.12□□□□□ -1.11
KDM3A-209ENST00000466058 RTCBQ9Y3I0 505 aaKnown RBP8.12□□□□□ -1.11
KDM3A-209ENST00000466058 MEGF6O75095 1541 aa8.12□□□□□ -1.11
KDM3A-209ENST00000466058 CEP290O15078 2479 aa8.11□□□□□ -1.11
KDM3A-209ENST00000466058 SNPHO15079 494 aa8.11□□□□□ -1.11
KDM3A-209ENST00000466058 RFC4P35249 363 aa8.11□□□□□ -1.11
KDM3A-209ENST00000466058 BRPF1P55201 1214 aaPredicted RBP8.11□□□□□ -1.11
KDM3A-209ENST00000466058 DDR1Q08345 913 aa8.11□□□□□ -1.11
KDM3A-209ENST00000466058 ZIC5Q96T25 663 aa8.11□□□□□ -1.11
KDM3A-209ENST00000466058 ADAMTSL1Q8N6G6 1762 aa8.11□□□□□ -1.11
KDM3A-209ENST00000466058 EPHX2P34913 555 aa8.1□□□□□ -1.11
KDM3A-209ENST00000466058 ATP6V1AP38606 617 aa8.1□□□□□ -1.11
KDM3A-209ENST00000466058 CST9Q5W186 159 aa8.1□□□□□ -1.11
KDM3A-209ENST00000466058 TTLL6Q8N841 843 aa8.1□□□□□ -1.11
KDM3A-209ENST00000466058 SLAIN1Q8ND83 568 aa8.1□□□□□ -1.11
KDM3A-209ENST00000466058 COL25A1Q9BXS0 654 aaPredicted RBP8.1□□□□□ -1.11
KDM3A-209ENST00000466058 HACL1Q9UJ83 578 aa8.1□□□□□ -1.11
KDM3A-209ENST00000466058 TLL2Q9Y6L7 1015 aa8.1□□□□□ -1.11
KDM3A-209ENST00000466058 FER1L6Q2WGJ9 1857 aa8.09□□□□□ -1.11
KDM3A-209ENST00000466058 TRAF5O00463 557 aa8.09□□□□□ -1.11
KDM3A-209ENST00000466058 CTU1Q7Z7A3 348 aaKnown RBP8.09□□□□□ -1.11
KDM3A-209ENST00000466058 SRP68Q9UHB9 627 aaKnown RBP8.09□□□□□ -1.11
KDM3A-209ENST00000466058 BRCA2P51587 3418 aa8.09□□□□□ -1.11
KDM3A-209ENST00000466058 C21orf2O43822 256 aa8.08□□□□□ -1.12
KDM3A-209ENST00000466058 PIGBQ92521 554 aa8.08□□□□□ -1.12
KDM3A-209ENST00000466058 CENPFP49454 3210 aa8.08□□□□□ -1.12
KDM3A-209ENST00000466058 AFDNP55196 1824 aaKnown RBP8.08□□□□□ -1.12
KDM3A-209ENST00000466058 DLEC1Q9Y238 1755 aa8.07□□□□□ -1.12
KDM3A-209ENST00000466058 RNF123Q5XPI4 1314 aa8.07□□□□□ -1.12
KDM3A-209ENST00000466058 RANBP2P49792 3224 aaKnown RBP8.07□□□□□ -1.12
KDM3A-209ENST00000466058 POTEFA5A3E0 1075 aa8.07□□□□□ -1.12
KDM3A-209ENST00000466058 USHBP1Q8N6Y0 703 aa8.07□□□□□ -1.12
KDM3A-209ENST00000466058 VCANP13611 3396 aa8.07□□□□□ -1.12
KDM3A-209ENST00000466058 FAM208AQ9UK61 1670 aaKnown RBP8.07□□□□□ -1.12
KDM3A-209ENST00000466058 AKAP11Q9UKA4 1901 aa8.07□□□□□ -1.12
KDM3A-209ENST00000466058 CACNA1SQ13698 1873 aa8.06□□□□□ -1.12
KDM3A-209ENST00000466058 TRPA1O75762 1119 aa8.06□□□□□ -1.12
KDM3A-209ENST00000466058 PNMA8AQ86V59 439 aaPredicted RBP8.06□□□□□ -1.12
KDM3A-209ENST00000466058 C2CD5Q86YS7 1000 aa8.06□□□□□ -1.12
KDM3A-209ENST00000466058 ASAP1Q9ULH1 1129 aa8.06□□□□□ -1.12
KDM3A-209ENST00000466058 SCN11AQ9UI33 1791 aa8.06□□□□□ -1.12
KDM3A-209ENST00000466058 ZNF541Q9H0D2 1346 aa8.05□□□□□ -1.12
KDM3A-209ENST00000466058 LOC105371045A0A1W2PR82 267 aa8.05□□□□□ -1.12
KDM3A-209ENST00000466058 POLRMTO00411 1230 aaKnown RBP8.05□□□□□ -1.12
KDM3A-209ENST00000466058 BICDL1Q6ZP65 573 aa8.05□□□□□ -1.12
KDM3A-209ENST00000466058 SAPCD2Q86UD0 394 aa8.05□□□□□ -1.12
KDM3A-209ENST00000466058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.05□□□□□ -1.12
KDM3A-209ENST00000466058 SYNE4Q8N205 404 aa8.05□□□□□ -1.12
KDM3A-209ENST00000466058 ZNF622Q969S3 477 aaKnown RBP eCLIP8.05□□□□□ -1.122e-9■□□□□ 8.1
KDM3A-209ENST00000466058 RAPGEFL1Q9UHV5 662 aa8.05□□□□□ -1.12
KDM3A-209ENST00000466058 MYH14Q7Z406 1995 aaKnown RBP8.04□□□□□ -1.12
KDM3A-209ENST00000466058 TAOK3Q9H2K8 898 aa8.04□□□□□ -1.12
KDM3A-209ENST00000466058 TTC21AQ8NDW8 1320 aa8.03□□□□□ -1.12
KDM3A-209ENST00000466058 H0YIN7 160 aa8.03□□□□□ -1.12
KDM3A-209ENST00000466058 RPS6KA4O75676 772 aa8.03□□□□□ -1.12
KDM3A-209ENST00000466058 CELF2O95319 508 aaKnown RBP8.03□□□□□ -1.12
KDM3A-209ENST00000466058 COL9A1P20849 921 aa8.03□□□□□ -1.12
KDM3A-209ENST00000466058 NME9Q86XW9 330 aa8.03□□□□□ -1.12
KDM3A-209ENST00000466058 KCNV2Q8TDN2 545 aa8.03□□□□□ -1.12
KDM3A-209ENST00000466058 IP6K1Q92551 441 aa8.03□□□□□ -1.12
KDM3A-209ENST00000466058 FAM163AQ96GL9 167 aaPredicted RBP8.03□□□□□ -1.12
KDM3A-209ENST00000466058 ZNF408Q9H9D4 720 aa8.03□□□□□ -1.12
KDM3A-209ENST00000466058 KIAA0100Q14667 2235 aaKnown RBP8.03□□□□□ -1.12
KDM3A-209ENST00000466058 PAPPA2Q9BXP8 1791 aa8.02□□□□□ -1.13
KDM3A-209ENST00000466058 CYP27B1O15528 508 aa8.02□□□□□ -1.13
KDM3A-209ENST00000466058 AKAP4Q5JQC9 854 aa8.02□□□□□ -1.13
KDM3A-209ENST00000466058 PDCD7Q8N8D1 485 aaKnown RBP8.02□□□□□ -1.13
KDM3A-209ENST00000466058 RAPGEF4Q8WZA2 1011 aa8.02□□□□□ -1.13
KDM3A-209ENST00000466058 MFRPQ9BY79 579 aa8.02□□□□□ -1.13
KDM3A-209ENST00000466058 PRDM6Q9NQX0 595 aa8.02□□□□□ -1.13
KDM3A-209ENST00000466058 RNF186Q9NXI6 227 aa8.02□□□□□ -1.13
KDM3A-209ENST00000466058 BOLA1Q9Y3E2 137 aa8.02□□□□□ -1.13
KDM3A-209ENST00000466058 PCDH11XQ9BZA7 1347 aa8.02□□□□□ -1.13
KDM3A-209ENST00000466058 PCDH11YQ9BZA8 1340 aa8.02□□□□□ -1.13
KDM3A-209ENST00000466058 USP31Q70CQ4 1352 aa8.01□□□□□ -1.13
KDM3A-209ENST00000466058 TATP17735 454 aaPredicted RBP8.01□□□□□ -1.13
KDM3A-209ENST00000466058 TM4SF1P30408 202 aa8.01□□□□□ -1.13
KDM3A-209ENST00000466058 NOGQ13253 232 aa8.01□□□□□ -1.13
KDM3A-209ENST00000466058 DCAF11Q8TEB1 546 aa8.01□□□□□ -1.13
KDM3A-209ENST00000466058 SLC4A9Q96Q91 983 aa8.01□□□□□ -1.13
KDM3A-209ENST00000466058 HDAC9Q9UKV0 1011 aa8.01□□□□□ -1.13
KDM3A-209ENST00000466058 SPTBN5Q9NRC6 3674 aaKnown RBP8□□□□□ -1.13
KDM3A-209ENST00000466058 H0YGN5 161 aa8□□□□□ -1.13
KDM3A-209ENST00000466058 KIF23Q02241 960 aaPredicted RBP8□□□□□ -1.13
KDM3A-209ENST00000466058 NBPF6Q5VWK0 638 aa8□□□□□ -1.13
KDM3A-209ENST00000466058 CCDC24Q8N4L8 307 aa8□□□□□ -1.13
KDM3A-209ENST00000466058 EFCAB3Q8N7B9 438 aa8□□□□□ -1.13
KDM3A-209ENST00000466058 NBPF4Q96M43 638 aa8□□□□□ -1.13
KDM3A-209ENST00000466058 MPHOSPH9Q99550 1183 aa8□□□□□ -1.13
KDM3A-209ENST00000466058 ATG3Q9NT62 314 aa8□□□□□ -1.13
KDM3A-209ENST00000466058 WDR70Q9NW82 654 aa8□□□□□ -1.13
KDM3A-209ENST00000466058 SAGE1Q9NXZ1 904 aa8□□□□□ -1.13
KDM3A-209ENST00000466058 TMOD3Q9NYL9 352 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms