RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 SRGNP10124 158 aa16.27■□□□□ 0.2
TRA2B-208ENST00000465245 LDHDQ86WU2 507 aa16.27■□□□□ 0.2
TRA2B-208ENST00000465245 CAMTA2O94983 1202 aa16.26■□□□□ 0.19
TRA2B-208ENST00000465245 AIDAQ96BJ3 306 aa16.26■□□□□ 0.19
TRA2B-208ENST00000465245 MASTLQ96GX5 879 aa16.26■□□□□ 0.19
TRA2B-208ENST00000465245 PRDM10Q9NQV6 1147 aa16.26■□□□□ 0.19
TRA2B-208ENST00000465245 GNAT3A8MTJ3 354 aa16.25■□□□□ 0.19
TRA2B-208ENST00000465245 L3MBTL3Q96JM7 780 aaPredicted RBP16.25■□□□□ 0.19
TRA2B-208ENST00000465245 FMNL2Q96PY5 1086 aa16.25■□□□□ 0.19
TRA2B-208ENST00000465245 TAF1DQ9H5J8 278 aaPredicted RBP16.25■□□□□ 0.19
TRA2B-208ENST00000465245 ADAMTSL1Q8N6G6 1762 aa16.25■□□□□ 0.19
TRA2B-208ENST00000465245 TMEM88BA6NKF7 163 aa16.24■□□□□ 0.19
TRA2B-208ENST00000465245 A1BGP04217 495 aa16.24■□□□□ 0.19
TRA2B-208ENST00000465245 CTCFP49711 727 aaPredicted RBP16.24■□□□□ 0.19
TRA2B-208ENST00000465245 CCDC93Q567U6 631 aa16.24■□□□□ 0.19
TRA2B-208ENST00000465245 DZIP3Q86Y13 1208 aaKnown RBP16.24■□□□□ 0.19
TRA2B-208ENST00000465245 IL17REQ8NFR9 667 aa16.24■□□□□ 0.19
TRA2B-208ENST00000465245 GAS2L2Q8NHY3 880 aa16.24■□□□□ 0.19
TRA2B-208ENST00000465245 COL3A1P02461 1466 aaPredicted RBP16.23■□□□□ 0.19
TRA2B-208ENST00000465245 VEGFBP49765 207 aa16.23■□□□□ 0.19
TRA2B-208ENST00000465245 EAPPQ56P03 285 aaPredicted RBP16.23■□□□□ 0.19
TRA2B-208ENST00000465245 NBPF5PQ86XG9 351 aaPredicted RBP16.22■□□□□ 0.19
TRA2B-208ENST00000465245 PCGF6Q9BYE7 350 aa16.22■□□□□ 0.19
TRA2B-208ENST00000465245 CLEC11AQ9Y240 323 aa16.22■□□□□ 0.19
TRA2B-208ENST00000465245 ZNF541Q9H0D2 1346 aa16.21■□□□□ 0.19
TRA2B-208ENST00000465245 U2SURPO15042 1029 aaKnown RBP16.21■□□□□ 0.19
TRA2B-208ENST00000465245 ITGBL1O95965 494 aaPredicted RBP16.21■□□□□ 0.19
TRA2B-208ENST00000465245 FKBP4Q02790 459 aaKnown RBP eCLIP16.21■□□□□ 0.19
TRA2B-208ENST00000465245 HACL1Q9UJ83 578 aa16.21■□□□□ 0.19
TRA2B-208ENST00000465245 NPR1P16066 1061 aa16.2■□□□□ 0.18
TRA2B-208ENST00000465245 PIP4K2AP48426 406 aaPredicted RBP16.2■□□□□ 0.18
TRA2B-208ENST00000465245 CC2D1BQ5T0F9 858 aaKnown RBP16.2■□□□□ 0.18
TRA2B-208ENST00000465245 C7orf43Q8WVR3 580 aa16.2■□□□□ 0.18
TRA2B-208ENST00000465245 ZNF277Q9NRM2 450 aaPredicted RBP16.2■□□□□ 0.18
TRA2B-208ENST00000465245 CEMIPQ8WUJ3 1361 aa16.2■□□□□ 0.18
TRA2B-208ENST00000465245 BTBD11A6QL63 1104 aa16.19■□□□□ 0.18
TRA2B-208ENST00000465245 KCNQ3O43525 872 aa16.19■□□□□ 0.18
TRA2B-208ENST00000465245 EPHX2P34913 555 aa16.19■□□□□ 0.18
TRA2B-208ENST00000465245 LBX1P52954 281 aa16.19■□□□□ 0.18
TRA2B-208ENST00000465245 CLEC4GQ6UXB4 293 aa16.19■□□□□ 0.18
TRA2B-208ENST00000465245 WBP1LQ9NX94 342 aa16.19■□□□□ 0.18
TRA2B-208ENST00000465245 ZNF652Q9Y2D9 606 aa16.19■□□□□ 0.18
TRA2B-208ENST00000465245 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
TRA2B-208ENST00000465245 RNF123Q5XPI4 1314 aa16.19■□□□□ 0.18
TRA2B-208ENST00000465245 DEFB115Q30KQ5 88 aa16.17■□□□□ 0.18
TRA2B-208ENST00000465245 OLFM4Q6UX06 510 aa16.17■□□□□ 0.18
TRA2B-208ENST00000465245 PNMA8AQ86V59 439 aaPredicted RBP16.17■□□□□ 0.18
TRA2B-208ENST00000465245 USP16Q9Y5T5 823 aa16.17■□□□□ 0.18
TRA2B-208ENST00000465245 LAMB4A4D0S4 1761 aa16.16■□□□□ 0.18
TRA2B-208ENST00000465245 RASSF10A6NK89 507 aa16.16■□□□□ 0.18
TRA2B-208ENST00000465245 IARSP41252 1262 aaKnown RBP16.16■□□□□ 0.18
TRA2B-208ENST00000465245 MAP1SQ66K74 1059 aaPredicted RBP16.16■□□□□ 0.18
TRA2B-208ENST00000465245 RTKN2Q8IZC4 609 aa16.16■□□□□ 0.18
TRA2B-208ENST00000465245 CNTROBQ8N137 903 aa16.16■□□□□ 0.18
TRA2B-208ENST00000465245 NIP7Q9Y221 180 aaKnown RBP eCLIP16.16■□□□□ 0.18
TRA2B-208ENST00000465245 TRPM7Q96QT4 1865 aa16.16■□□□□ 0.18
TRA2B-208ENST00000465245 THSD7BQ9C0I4 1608 aa16.16■□□□□ 0.18
TRA2B-208ENST00000465245 PRAMEF22A3QJZ6 481 aa16.15■□□□□ 0.18
TRA2B-208ENST00000465245 KLRG2A4D1S0 409 aaPredicted RBP16.15■□□□□ 0.18
TRA2B-208ENST00000465245 FAM177BA6PVY3 158 aa16.15■□□□□ 0.18
TRA2B-208ENST00000465245 PER1O15534 1290 aaPredicted RBP16.15■□□□□ 0.18
TRA2B-208ENST00000465245 HSPA8P11142 646 aaKnown RBP16.15■□□□□ 0.18
TRA2B-208ENST00000465245 CNGB1Q14028 1251 aaPredicted RBP16.15■□□□□ 0.18
TRA2B-208ENST00000465245 TPTE2Q6XPS3 522 aa16.15■□□□□ 0.18
TRA2B-208ENST00000465245 ABT1Q9ULW3 272 aaKnown RBP16.15■□□□□ 0.18
TRA2B-208ENST00000465245 FZD9O00144 591 aa16.14■□□□□ 0.17
TRA2B-208ENST00000465245 MAP2K1Q02750 393 aaPredicted RBP16.14■□□□□ 0.17
TRA2B-208ENST00000465245 GPC2Q8N158 579 aa16.14■□□□□ 0.17
TRA2B-208ENST00000465245 SYNE4Q8N205 404 aa16.14■□□□□ 0.17
TRA2B-208ENST00000465245 WDR33Q9C0J8 1336 aaKnown RBP16.14■□□□□ 0.17
TRA2B-208ENST00000465245 LTBP1Q14766 1721 aa16.14■□□□□ 0.17
TRA2B-208ENST00000465245 NUP98P52948 1817 aa16.13■□□□□ 0.17
TRA2B-208ENST00000465245 SNRPA1P09661 255 aaKnown RBP16.13■□□□□ 0.17
TRA2B-208ENST00000465245 ALDH1B1P30837 517 aa16.13■□□□□ 0.17
TRA2B-208ENST00000465245 PRKAR2BP31323 418 aa16.13■□□□□ 0.17
TRA2B-208ENST00000465245 ABHD8Q96I13 439 aa16.13■□□□□ 0.17
TRA2B-208ENST00000465245 PHACTR3Q96KR7 559 aa16.13■□□□□ 0.17
TRA2B-208ENST00000465245 JDP2Q8WYK2 163 aa16.12■□□□□ 0.17
TRA2B-208ENST00000465245 NPC1L1Q9UHC9 1359 aa16.12■□□□□ 0.17
TRA2B-208ENST00000465245 COL4A5P29400 1685 aa16.11■□□□□ 0.17
TRA2B-208ENST00000465245 SNED1Q8TER0 1413 aa16.11■□□□□ 0.17
TRA2B-208ENST00000465245 NBPF26B4DH59 902 aa16.11■□□□□ 0.17
TRA2B-208ENST00000465245 RGL2O15211 777 aa16.11■□□□□ 0.17
TRA2B-208ENST00000465245 GTF2E1P29083 439 aaPredicted RBP16.11■□□□□ 0.17
TRA2B-208ENST00000465245 FAM161AQ3B820 660 aa16.11■□□□□ 0.17
TRA2B-208ENST00000465245 NBPF10Q6P3W6 841 aaKnown RBP16.11■□□□□ 0.17
TRA2B-208ENST00000465245 NBPF15Q8N660 670 aa16.11■□□□□ 0.17
TRA2B-208ENST00000465245 PSMD1Q99460 953 aa16.11■□□□□ 0.17
TRA2B-208ENST00000465245 RSPH6AQ9H0K4 717 aa16.11■□□□□ 0.17
TRA2B-208ENST00000465245 DDX21Q9NR30 783 aaKnown RBP eCLIP16.11■□□□□ 0.17
TRA2B-208ENST00000465245 GJA3Q9Y6H8 435 aa16.11■□□□□ 0.17
TRA2B-208ENST00000465245 LMOD1P29536 600 aaPredicted RBP16.1■□□□□ 0.17
TRA2B-208ENST00000465245 EIF6P56537 245 aaKnown RBP16.1■□□□□ 0.17
TRA2B-208ENST00000465245 RTF1Q92541 710 aaKnown RBP16.1■□□□□ 0.17
TRA2B-208ENST00000465245 SLC34A2O95436 690 aa16.09■□□□□ 0.17
TRA2B-208ENST00000465245 HLFQ16534 295 aa16.09■□□□□ 0.17
TRA2B-208ENST00000465245 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
TRA2B-208ENST00000465245 MCM10Q7L590 875 aa16.09■□□□□ 0.17
TRA2B-208ENST00000465245 ABCC12Q96J65 1359 aa16.09■□□□□ 0.17
TRA2B-208ENST00000465245 BEGAINQ9BUH8 593 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms