RNA–Protein interactions for RNA: ENST00000465098.1

CAPN8-206, Transcript of calpain 8, humanhuman

TSL 3

Gene CAPN8, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-206ENST00000465098 SETDB2Q96T68 719 aa13.09□□□□□ -0.31
CAPN8-206ENST00000465098 ZNF330Q9Y3S2 320 aaPredicted RBP13.09□□□□□ -0.31
CAPN8-206ENST00000465098 DICER1Q9UPY3 1922 aaKnown RBP13.09□□□□□ -0.31
CAPN8-206ENST00000465098 SLX4Q8IY92 1834 aa13.09□□□□□ -0.31
CAPN8-206ENST00000465098 CNTNAP1P78357 1384 aa13.08□□□□□ -0.31
CAPN8-206ENST00000465098 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
CAPN8-206ENST00000465098 GNAT3A8MTJ3 354 aa13.08□□□□□ -0.32
CAPN8-206ENST00000465098 KCNQ3O43525 872 aa13.08□□□□□ -0.32
CAPN8-206ENST00000465098 TEFQ10587 303 aa13.08□□□□□ -0.32
CAPN8-206ENST00000465098 CNBD1Q8NA66 436 aa13.08□□□□□ -0.32
CAPN8-206ENST00000465098 MASTLQ96GX5 879 aa13.08□□□□□ -0.32
CAPN8-206ENST00000465098 L3MBTL3Q96JM7 780 aaPredicted RBP13.08□□□□□ -0.32
CAPN8-206ENST00000465098 TAF1DQ9H5J8 278 aaPredicted RBP13.08□□□□□ -0.32
CAPN8-206ENST00000465098 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.32
CAPN8-206ENST00000465098 SOGA3Q5TF21 947 aa13.07□□□□□ -0.32
CAPN8-206ENST00000465098 LDHDQ86WU2 507 aa13.07□□□□□ -0.32
CAPN8-206ENST00000465098 PCGF6Q9BYE7 350 aa13.07□□□□□ -0.32
CAPN8-206ENST00000465098 PRDM10Q9NQV6 1147 aa13.07□□□□□ -0.32
CAPN8-206ENST00000465098 KLRG2A4D1S0 409 aaPredicted RBP13.06□□□□□ -0.32
CAPN8-206ENST00000465098 IQCA1LA6NCM1 817 aa13.06□□□□□ -0.32
CAPN8-206ENST00000465098 VEGFBP49765 207 aa13.06□□□□□ -0.32
CAPN8-206ENST00000465098 ST5P78524 1137 aa13.06□□□□□ -0.32
CAPN8-206ENST00000465098 FMNL2Q96PY5 1086 aa13.06□□□□□ -0.32
CAPN8-206ENST00000465098 USP16Q9Y5T5 823 aa13.06□□□□□ -0.32
CAPN8-206ENST00000465098 SCN7AQ01118 1682 aa13.05□□□□□ -0.32
CAPN8-206ENST00000465098 PIP4K2AP48426 406 aaPredicted RBP13.05□□□□□ -0.32
CAPN8-206ENST00000465098 CC2D1BQ5T0F9 858 aaKnown RBP13.05□□□□□ -0.32
CAPN8-206ENST00000465098 DZIP3Q86Y13 1208 aaKnown RBP13.05□□□□□ -0.32
CAPN8-206ENST00000465098 GAS2L2Q8NHY3 880 aa13.05□□□□□ -0.32
CAPN8-206ENST00000465098 KIF7Q2M1P5 1343 aa13.05□□□□□ -0.32
CAPN8-206ENST00000465098 CEMIPQ8WUJ3 1361 aa13.05□□□□□ -0.32
CAPN8-206ENST00000465098 TMEM88BA6NKF7 163 aa13.04□□□□□ -0.32
CAPN8-206ENST00000465098 OLFM4Q6UX06 510 aa13.04□□□□□ -0.32
CAPN8-206ENST00000465098 CLEC4GQ6UXB4 293 aa13.04□□□□□ -0.32
CAPN8-206ENST00000465098 PHACTR3Q96KR7 559 aa13.04□□□□□ -0.32
CAPN8-206ENST00000465098 WBP1LQ9NX94 342 aa13.04□□□□□ -0.32
CAPN8-206ENST00000465098 ZNF541Q9H0D2 1346 aa13.04□□□□□ -0.32
CAPN8-206ENST00000465098 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
CAPN8-206ENST00000465098 PRAMEF22A3QJZ6 481 aa13.03□□□□□ -0.32
CAPN8-206ENST00000465098 BTBD11A6QL63 1104 aa13.03□□□□□ -0.32
CAPN8-206ENST00000465098 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
CAPN8-206ENST00000465098 NPHP1O15259 732 aa13.03□□□□□ -0.32
CAPN8-206ENST00000465098 CTCFP49711 727 aaPredicted RBP13.03□□□□□ -0.32
CAPN8-206ENST00000465098 FKBP4Q02790 459 aaKnown RBP eCLIP13.03□□□□□ -0.32
CAPN8-206ENST00000465098 CCDC93Q567U6 631 aa13.03□□□□□ -0.32
CAPN8-206ENST00000465098 NPM2Q86SE8 214 aaKnown RBP13.03□□□□□ -0.32
CAPN8-206ENST00000465098 NBPF5PQ86XG9 351 aaPredicted RBP13.03□□□□□ -0.32
CAPN8-206ENST00000465098 ZNF277Q9NRM2 450 aaPredicted RBP13.03□□□□□ -0.32
CAPN8-206ENST00000465098 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.32
CAPN8-206ENST00000465098 NPR1P16066 1061 aa13.02□□□□□ -0.33
CAPN8-206ENST00000465098 EAPPQ56P03 285 aaPredicted RBP13.02□□□□□ -0.33
CAPN8-206ENST00000465098 HACL1Q9UJ83 578 aa13.02□□□□□ -0.33
CAPN8-206ENST00000465098 RASSF10A6NK89 507 aa13.01□□□□□ -0.33
CAPN8-206ENST00000465098 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
CAPN8-206ENST00000465098 FZD9O00144 591 aa13.01□□□□□ -0.33
CAPN8-206ENST00000465098 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
CAPN8-206ENST00000465098 EPHX2P34913 555 aa13.01□□□□□ -0.33
CAPN8-206ENST00000465098 LBX1P52954 281 aa13.01□□□□□ -0.33
CAPN8-206ENST00000465098 NBPF10Q6P3W6 841 aaKnown RBP13.01□□□□□ -0.33
CAPN8-206ENST00000465098 NBPF15Q8N660 670 aa13.01□□□□□ -0.33
CAPN8-206ENST00000465098 SCN4AP35499 1836 aa13.01□□□□□ -0.33
CAPN8-206ENST00000465098 TPTE2Q6XPS3 522 aa13□□□□□ -0.33
CAPN8-206ENST00000465098 RTKN2Q8IZC4 609 aa13□□□□□ -0.33
CAPN8-206ENST00000465098 CNTROBQ8N137 903 aa13□□□□□ -0.33
CAPN8-206ENST00000465098 AIDAQ96BJ3 306 aa13□□□□□ -0.33
CAPN8-206ENST00000465098 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
CAPN8-206ENST00000465098 ARFGEF2Q9Y6D5 1785 aa12.99□□□□□ -0.33
CAPN8-206ENST00000465098 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
CAPN8-206ENST00000465098 RGL2O15211 777 aa12.99□□□□□ -0.33
CAPN8-206ENST00000465098 SNRPA1P09661 255 aaKnown RBP12.99□□□□□ -0.33
CAPN8-206ENST00000465098 PRKAR2BP31323 418 aa12.99□□□□□ -0.33
CAPN8-206ENST00000465098 DEFB115Q30KQ5 88 aa12.99□□□□□ -0.33
CAPN8-206ENST00000465098 MAP1SQ66K74 1059 aaPredicted RBP12.99□□□□□ -0.33
CAPN8-206ENST00000465098 SYNE4Q8N205 404 aa12.99□□□□□ -0.33
CAPN8-206ENST00000465098 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
CAPN8-206ENST00000465098 NIP7Q9Y221 180 aaKnown RBP eCLIP12.99□□□□□ -0.33
CAPN8-206ENST00000465098 ZNF652Q9Y2D9 606 aa12.99□□□□□ -0.33
CAPN8-206ENST00000465098 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
CAPN8-206ENST00000465098 BCORQ6W2J9 1755 aa12.99□□□□□ -0.33
CAPN8-206ENST00000465098 ADAMTSL1Q8N6G6 1762 aa12.99□□□□□ -0.33
CAPN8-206ENST00000465098 NPC1L1Q9UHC9 1359 aa12.98□□□□□ -0.33
CAPN8-206ENST00000465098 CACNA1SQ13698 1873 aa12.98□□□□□ -0.33
CAPN8-206ENST00000465098 HSPA8P11142 646 aaKnown RBP12.98□□□□□ -0.33
CAPN8-206ENST00000465098 ALDH1B1P30837 517 aa12.98□□□□□ -0.33
CAPN8-206ENST00000465098 IARSP41252 1262 aaKnown RBP12.98□□□□□ -0.33
CAPN8-206ENST00000465098 HLFQ16534 295 aa12.98□□□□□ -0.33
CAPN8-206ENST00000465098 PNMA8AQ86V59 439 aaPredicted RBP12.98□□□□□ -0.33
CAPN8-206ENST00000465098 SNED1Q8TER0 1413 aa12.97□□□□□ -0.33
CAPN8-206ENST00000465098 WDR33Q9C0J8 1336 aaKnown RBP12.97□□□□□ -0.33
CAPN8-206ENST00000465098 FAM177BA6PVY3 158 aa12.97□□□□□ -0.33
CAPN8-206ENST00000465098 GPC2Q8N158 579 aa12.97□□□□□ -0.33
CAPN8-206ENST00000465098 FMR1Q06787 632 aaKnown RBP eCLIP12.96□□□□□ -0.33
CAPN8-206ENST00000465098 CNGB1Q14028 1251 aaPredicted RBP12.96□□□□□ -0.33
CAPN8-206ENST00000465098 CRY2Q49AN0 593 aa12.96□□□□□ -0.33
CAPN8-206ENST00000465098 MCM10Q7L590 875 aa12.96□□□□□ -0.33
CAPN8-206ENST00000465098 ABHD8Q96I13 439 aa12.96□□□□□ -0.33
CAPN8-206ENST00000465098 PSMD1Q99460 953 aa12.96□□□□□ -0.33
CAPN8-206ENST00000465098 MAP2K1Q02750 393 aaPredicted RBP12.95□□□□□ -0.34
CAPN8-206ENST00000465098 DCTN1Q14203 1278 aa12.95□□□□□ -0.34
CAPN8-206ENST00000465098 DDX21Q9NR30 783 aaKnown RBP eCLIP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms