RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 SMC1BQ8NDV3 1235 aa30.26■■■□□ 2.44
USP42-205ENST00000465073 RGL2O15211 777 aa30.25■■■□□ 2.43
USP42-205ENST00000465073 SRGNP10124 158 aa30.25■■■□□ 2.43
USP42-205ENST00000465073 NBPF5PQ86XG9 351 aaPredicted RBP30.25■■■□□ 2.43
USP42-205ENST00000465073 ZNF219Q9P2Y4 722 aaPredicted RBP30.25■■■□□ 2.43
USP42-205ENST00000465073 MASTLQ96GX5 879 aa30.24■■■□□ 2.43
USP42-205ENST00000465073 NBPF26B4DH59 902 aa30.23■■■□□ 2.43
USP42-205ENST00000465073 NBPF10Q6P3W6 841 aaKnown RBP30.23■■■□□ 2.43
USP42-205ENST00000465073 NBPF15Q8N660 670 aa30.23■■■□□ 2.43
USP42-205ENST00000465073 BCORQ6W2J9 1755 aa30.22■■■□□ 2.43
USP42-205ENST00000465073 DPY19L2Q6NUT2 758 aa30.22■■■□□ 2.43
USP42-205ENST00000465073 SOGA3Q5TF21 947 aa30.21■■■□□ 2.43
USP42-205ENST00000465073 PNISRQ8TF01 805 aaKnown RBP30.21■■■□□ 2.43
USP42-205ENST00000465073 LTBP3Q9NS15 1303 aa30.21■■■□□ 2.43
USP42-205ENST00000465073 ERFEQ4G0M1 354 aa30.2■■■□□ 2.43
USP42-205ENST00000465073 PRPF40BQ6NWY9 871 aaKnown RBP30.2■■■□□ 2.43
USP42-205ENST00000465073 MIS18AQ9NYP9 233 aa30.2■■■□□ 2.43
USP42-205ENST00000465073 COL11A2P13942 1736 aaPredicted RBP30.2■■■□□ 2.43
USP42-205ENST00000465073 TPTE2Q6XPS3 522 aa30.19■■■□□ 2.42
USP42-205ENST00000465073 TAOK3Q9H2K8 898 aa30.19■■■□□ 2.42
USP42-205ENST00000465073 WDR90Q96KV7 1748 aa30.18■■■□□ 2.42
USP42-205ENST00000465073 HTRA3P83110 453 aa30.18■■■□□ 2.42
USP42-205ENST00000465073 PLEKHF1Q96S99 279 aa30.18■■■□□ 2.42
USP42-205ENST00000465073 NIP7Q9Y221 180 aaKnown RBP eCLIP30.18■■■□□ 2.42
USP42-205ENST00000465073 KLRG1Q96E93 195 aa30.17■■■□□ 2.42
USP42-205ENST00000465073 TIAM2Q8IVF5 1701 aa30.16■■■□□ 2.42
USP42-205ENST00000465073 CCDC88AQ3V6T2 1871 aa30.16■■■□□ 2.42
USP42-205ENST00000465073 KLRG2A4D1S0 409 aaPredicted RBP30.16■■■□□ 2.42
USP42-205ENST00000465073 PNNQ9H307 717 aaKnown RBP30.16■■■□□ 2.42
USP42-205ENST00000465073 NPR1P16066 1061 aa30.15■■■□□ 2.42
USP42-205ENST00000465073 FER1L6Q2WGJ9 1857 aa30.15■■■□□ 2.42
USP42-205ENST00000465073 NFE2L2Q16236 605 aa30.14■■■□□ 2.42
USP42-205ENST00000465073 SLX4Q8IY92 1834 aa30.13■■■□□ 2.41
USP42-205ENST00000465073 POTECB2RU33 542 aa30.13■■■□□ 2.41
USP42-205ENST00000465073 C7orf43Q8WVR3 580 aa30.12■■■□□ 2.41
USP42-205ENST00000465073 HLFQ16534 295 aa30.12■■■□□ 2.41
USP42-205ENST00000465073 EIF4A1P60842 406 aaKnown RBP30.11■■■□□ 2.41
USP42-205ENST00000465073 JMYQ8N9B5 988 aa30.11■■■□□ 2.41
USP42-205ENST00000465073 ERVV-1B6SEH8 477 aa30.1■■■□□ 2.41
USP42-205ENST00000465073 CCDC93Q567U6 631 aa30.1■■■□□ 2.41
USP42-205ENST00000465073 MAPK8IP3Q9UPT6 1336 aa30.09■■■□□ 2.41
USP42-205ENST00000465073 FAM177BA6PVY3 158 aa30.09■■■□□ 2.41
USP42-205ENST00000465073 DICER1Q9UPY3 1922 aaKnown RBP30.09■■■□□ 2.41
USP42-205ENST00000465073 GTF2E1P29083 439 aaPredicted RBP30.08■■■□□ 2.41
USP42-205ENST00000465073 THUMPD2Q9BTF0 503 aaKnown RBP30.08■■■□□ 2.41
USP42-205ENST00000465073 NGEFQ8N5V2 710 aa30.07■■■□□ 2.4
USP42-205ENST00000465073 ARFGEF2Q9Y6D5 1785 aa30.07■■■□□ 2.4
USP42-205ENST00000465073 NYXQ9GZU5 481 aa30.06■■■□□ 2.4
USP42-205ENST00000465073 RRP7AQ9Y3A4 280 aaKnown RBP30.06■■■□□ 2.4
USP42-205ENST00000465073 DDNO94850 711 aaPredicted RBP30.06■■■□□ 2.4
USP42-205ENST00000465073 ALDH1B1P30837 517 aa30.06■■■□□ 2.4
USP42-205ENST00000465073 MAP3K15Q6ZN16 1313 aa30.05■■■□□ 2.4
USP42-205ENST00000465073 LAMB4A4D0S4 1761 aa30.05■■■□□ 2.4
USP42-205ENST00000465073 DLG5Q8TDM6 1919 aa30.05■■■□□ 2.4
USP42-205ENST00000465073 FKBP4Q02790 459 aaKnown RBP eCLIP30.05■■■□□ 2.4
USP42-205ENST00000465073 KIF6Q6ZMV9 814 aa30.05■■■□□ 2.4
USP42-205ENST00000465073 RTKN2Q8IZC4 609 aa30.05■■■□□ 2.4
USP42-205ENST00000465073 KDM3BQ7LBC6 1761 aa30.05■■■□□ 2.4
USP42-205ENST00000465073 CACNA1SQ13698 1873 aa30.02■■■□□ 2.4
USP42-205ENST00000465073 TTLL7Q6ZT98 887 aa30.02■■■□□ 2.4
USP42-205ENST00000465073 MYL6BP14649 208 aa30.01■■■□□ 2.4
USP42-205ENST00000465073 RALBP1Q15311 655 aa30.01■■■□□ 2.4
USP42-205ENST00000465073 ERBB4Q15303 1308 aa30■■■□□ 2.39
USP42-205ENST00000465073 CRY2Q49AN0 593 aa29.99■■■□□ 2.39
USP42-205ENST00000465073 CHADLQ6NUI6 762 aa29.99■■■□□ 2.39
USP42-205ENST00000465073 ZNF277Q9NRM2 450 aaPredicted RBP29.99■■■□□ 2.39
USP42-205ENST00000465073 IQCA1LA6NCM1 817 aa29.99■■■□□ 2.39
USP42-205ENST00000465073 OLFM4Q6UX06 510 aa29.99■■■□□ 2.39
USP42-205ENST00000465073 NUTM1Q86Y26 1132 aa29.99■■■□□ 2.39
USP42-205ENST00000465073 L3MBTL3Q96JM7 780 aaPredicted RBP29.99■■■□□ 2.39
USP42-205ENST00000465073 TSPYL4Q9UJ04 414 aa29.99■■■□□ 2.39
USP42-205ENST00000465073 RIPK4P57078 832 aa29.97■■■□□ 2.39
USP42-205ENST00000465073 ZBTB3Q9H5J0 574 aa29.97■■■□□ 2.39
USP42-205ENST00000465073 ABCC12Q96J65 1359 aa29.96■■■□□ 2.39
USP42-205ENST00000465073 IBTKQ9P2D0 1353 aaPredicted RBP29.96■■■□□ 2.39
USP42-205ENST00000465073 BABAM1Q9NWV8 329 aa29.96■■■□□ 2.39
USP42-205ENST00000465073 GPTP24298 496 aa29.95■■■□□ 2.39
USP42-205ENST00000465073 ZNF34Q8IZ26 560 aa29.95■■■□□ 2.39
USP42-205ENST00000465073 UBN2Q6ZU65 1347 aa29.94■■■□□ 2.38
USP42-205ENST00000465073 SUSD4Q5VX71 490 aa29.94■■■□□ 2.38
USP42-205ENST00000465073 CC2D2BQ6DHV5 1058 aa29.94■■■□□ 2.38
USP42-205ENST00000465073 GIGYF2Q6Y7W6 1299 aaKnown RBP29.94■■■□□ 2.38
USP42-205ENST00000465073 SYNE4Q8N205 404 aa29.94■■■□□ 2.38
USP42-205ENST00000465073 HOXA10P31260 410 aaPredicted RBP29.93■■■□□ 2.38
USP42-205ENST00000465073 LMOD3Q0VAK6 560 aa29.93■■■□□ 2.38
USP42-205ENST00000465073 RPGRQ92834 1020 aaKnown RBP29.93■■■□□ 2.38
USP42-205ENST00000465073 TAF1DQ9H5J8 278 aaPredicted RBP29.93■■■□□ 2.38
USP42-205ENST00000465073 RIC1Q4ADV7 1423 aa29.93■■■□□ 2.38
USP42-205ENST00000465073 NUP98P52948 1817 aa29.93■■■□□ 2.38
USP42-205ENST00000465073 POTEIP0CG38 1075 aa29.93■■■□□ 2.38
USP42-205ENST00000465073 POTEJP0CG39 1038 aa29.93■■■□□ 2.38
USP42-205ENST00000465073 IARSP41252 1262 aaKnown RBP29.93■■■□□ 2.38
USP42-205ENST00000465073 PSMD1Q99460 953 aa29.93■■■□□ 2.38
USP42-205ENST00000465073 TMPOP42166 694 aaKnown RBP29.92■■■□□ 2.38
USP42-205ENST00000465073 LDHDQ86WU2 507 aa29.92■■■□□ 2.38
USP42-205ENST00000465073 ZNF541Q9H0D2 1346 aa29.91■■■□□ 2.38
USP42-205ENST00000465073 EIF2S2P20042 333 aaKnown RBP29.9■■■□□ 2.38
USP42-205ENST00000465073 PDIA6Q15084 440 aa29.9■■■□□ 2.38
USP42-205ENST00000465073 GRIPAP1Q4V328 841 aa29.9■■■□□ 2.38
USP42-205ENST00000465073 PARP10Q53GL7 1025 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms