RNA–Protein interactions for RNA: ENST00000464670.1

LSP1-213, Transcript of lymphocyte specific protein 1, humanhuman

TSL 5

Gene LSP1, Length 244 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-213ENST00000464670 PRPF40BQ6NWY9 871 aaKnown RBP18.02■□□□□ 0.48
LSP1-213ENST00000464670 MASTLQ96GX5 879 aa18.02■□□□□ 0.48
LSP1-213ENST00000464670 TBC1D2BQ9UPU7 963 aa18.02■□□□□ 0.48
LSP1-213ENST00000464670 ADAMTSL1Q8N6G6 1762 aa18.02■□□□□ 0.47
LSP1-213ENST00000464670 TEFQ10587 303 aa18.01■□□□□ 0.47
LSP1-213ENST00000464670 CAMTA2O94983 1202 aa18■□□□□ 0.47
LSP1-213ENST00000464670 NPM2Q86SE8 214 aaKnown RBP18■□□□□ 0.47
LSP1-213ENST00000464670 TAF1DQ9H5J8 278 aaPredicted RBP18■□□□□ 0.47
LSP1-213ENST00000464670 TMEM88BA6NKF7 163 aa17.99■□□□□ 0.47
LSP1-213ENST00000464670 NPHP1O15259 732 aa17.99■□□□□ 0.47
LSP1-213ENST00000464670 CTCFP49711 727 aaPredicted RBP17.99■□□□□ 0.47
LSP1-213ENST00000464670 CCDC24Q8N4L8 307 aa17.99■□□□□ 0.47
LSP1-213ENST00000464670 C7orf43Q8WVR3 580 aa17.99■□□□□ 0.47
LSP1-213ENST00000464670 AIDAQ96BJ3 306 aa17.99■□□□□ 0.47
LSP1-213ENST00000464670 FMNL2Q96PY5 1086 aa17.99■□□□□ 0.47
LSP1-213ENST00000464670 ZNF330Q9Y3S2 320 aaPredicted RBP17.99■□□□□ 0.47
LSP1-213ENST00000464670 GNAT3A8MTJ3 354 aa17.98■□□□□ 0.47
LSP1-213ENST00000464670 CCDC93Q567U6 631 aa17.98■□□□□ 0.47
LSP1-213ENST00000464670 IL17REQ8NFR9 667 aa17.98■□□□□ 0.47
LSP1-213ENST00000464670 GAS2L2Q8NHY3 880 aa17.98■□□□□ 0.47
LSP1-213ENST00000464670 CEMIPQ8WUJ3 1361 aa17.97■□□□□ 0.47
LSP1-213ENST00000464670 ITGBL1O95965 494 aaPredicted RBP17.97■□□□□ 0.47
LSP1-213ENST00000464670 CLEC4GQ6UXB4 293 aa17.97■□□□□ 0.47
LSP1-213ENST00000464670 COL3A1P02461 1466 aaPredicted RBP17.96■□□□□ 0.47
LSP1-213ENST00000464670 A1BGP04217 495 aa17.96■□□□□ 0.47
LSP1-213ENST00000464670 VEGFBP49765 207 aa17.96■□□□□ 0.47
LSP1-213ENST00000464670 DZIP3Q86Y13 1208 aaKnown RBP17.96■□□□□ 0.47
LSP1-213ENST00000464670 WBP1LQ9NX94 342 aa17.96■□□□□ 0.47
LSP1-213ENST00000464670 KIF7Q2M1P5 1343 aa17.96■□□□□ 0.46
LSP1-213ENST00000464670 KLRG2A4D1S0 409 aaPredicted RBP17.95■□□□□ 0.46
LSP1-213ENST00000464670 RGL2O15211 777 aa17.95■□□□□ 0.46
LSP1-213ENST00000464670 NPR1P16066 1061 aa17.95■□□□□ 0.46
LSP1-213ENST00000464670 FKBP4Q02790 459 aaKnown RBP eCLIP17.95■□□□□ 0.46
LSP1-213ENST00000464670 RASSF10A6NK89 507 aa17.94■□□□□ 0.46
LSP1-213ENST00000464670 PNMA8AQ86V59 439 aaPredicted RBP17.94■□□□□ 0.46
LSP1-213ENST00000464670 HACL1Q9UJ83 578 aa17.94■□□□□ 0.46
LSP1-213ENST00000464670 ZNF652Q9Y2D9 606 aa17.94■□□□□ 0.46
LSP1-213ENST00000464670 NBPF5PQ86XG9 351 aaPredicted RBP17.93■□□□□ 0.46
LSP1-213ENST00000464670 RTKN2Q8IZC4 609 aa17.93■□□□□ 0.46
LSP1-213ENST00000464670 ZNF541Q9H0D2 1346 aa17.93■□□□□ 0.46
LSP1-213ENST00000464670 PER1O15534 1290 aaPredicted RBP17.92■□□□□ 0.46
LSP1-213ENST00000464670 EPHX2P34913 555 aa17.92■□□□□ 0.46
LSP1-213ENST00000464670 EAPPQ56P03 285 aaPredicted RBP17.92■□□□□ 0.46
LSP1-213ENST00000464670 THSD7BQ9C0I4 1608 aa17.91■□□□□ 0.46
LSP1-213ENST00000464670 BTBD11A6QL63 1104 aa17.91■□□□□ 0.46
LSP1-213ENST00000464670 FZD9O00144 591 aa17.91■□□□□ 0.46
LSP1-213ENST00000464670 DEFB115Q30KQ5 88 aa17.91■□□□□ 0.46
LSP1-213ENST00000464670 TPTE2Q6XPS3 522 aa17.91■□□□□ 0.46
LSP1-213ENST00000464670 LBX1P52954 281 aa17.9■□□□□ 0.46
LSP1-213ENST00000464670 MAP2K1Q02750 393 aaPredicted RBP17.9■□□□□ 0.46
LSP1-213ENST00000464670 GPC2Q8N158 579 aa17.9■□□□□ 0.46
LSP1-213ENST00000464670 ZNF277Q9NRM2 450 aaPredicted RBP17.9■□□□□ 0.46
LSP1-213ENST00000464670 CLEC11AQ9Y240 323 aa17.9■□□□□ 0.46
LSP1-213ENST00000464670 NPC1L1Q9UHC9 1359 aa17.9■□□□□ 0.46
LSP1-213ENST00000464670 ALDH1B1P30837 517 aa17.89■□□□□ 0.45
LSP1-213ENST00000464670 CNTROBQ8N137 903 aa17.89■□□□□ 0.45
LSP1-213ENST00000464670 USP16Q9Y5T5 823 aa17.89■□□□□ 0.45
LSP1-213ENST00000464670 SNED1Q8TER0 1413 aa17.89■□□□□ 0.45
LSP1-213ENST00000464670 U2SURPO15042 1029 aaKnown RBP17.88■□□□□ 0.45
LSP1-213ENST00000464670 SLC34A2O95436 690 aa17.88■□□□□ 0.45
LSP1-213ENST00000464670 HSPA8P11142 646 aaKnown RBP17.88■□□□□ 0.45
LSP1-213ENST00000464670 IARSP41252 1262 aaKnown RBP17.88■□□□□ 0.45
LSP1-213ENST00000464670 PSMD1Q99460 953 aa17.88■□□□□ 0.45
LSP1-213ENST00000464670 RNF123Q5XPI4 1314 aa17.88■□□□□ 0.45
LSP1-213ENST00000464670 WDR33Q9C0J8 1336 aaKnown RBP17.88■□□□□ 0.45
LSP1-213ENST00000464670 TRPM7Q96QT4 1865 aa17.88■□□□□ 0.45
LSP1-213ENST00000464670 KCNQ3O43525 872 aa17.87■□□□□ 0.45
LSP1-213ENST00000464670 SNRPA1P09661 255 aaKnown RBP17.87■□□□□ 0.45
LSP1-213ENST00000464670 CC2D1BQ5T0F9 858 aaKnown RBP17.87■□□□□ 0.45
LSP1-213ENST00000464670 MAP1SQ66K74 1059 aaPredicted RBP17.86■□□□□ 0.45
LSP1-213ENST00000464670 ABHD8Q96I13 439 aa17.86■□□□□ 0.45
LSP1-213ENST00000464670 NIP7Q9Y221 180 aaKnown RBP eCLIP17.86■□□□□ 0.45
LSP1-213ENST00000464670 LAMB4A4D0S4 1761 aa17.86■□□□□ 0.45
LSP1-213ENST00000464670 CC2D2BQ6DHV5 1058 aa17.85■□□□□ 0.45
LSP1-213ENST00000464670 SYNE4Q8N205 404 aa17.85■□□□□ 0.45
LSP1-213ENST00000464670 JDP2Q8WYK2 163 aa17.85■□□□□ 0.45
LSP1-213ENST00000464670 LTBP1Q14766 1721 aa17.84■□□□□ 0.45
LSP1-213ENST00000464670 PIP4K2AP48426 406 aaPredicted RBP17.84■□□□□ 0.45
LSP1-213ENST00000464670 CRY2Q49AN0 593 aa17.84■□□□□ 0.45
LSP1-213ENST00000464670 GRIPAP1Q4V328 841 aa17.84■□□□□ 0.45
LSP1-213ENST00000464670 OLFM4Q6UX06 510 aa17.84■□□□□ 0.45
LSP1-213ENST00000464670 DDX21Q9NR30 783 aaKnown RBP eCLIP17.84■□□□□ 0.45
LSP1-213ENST00000464670 ABT1Q9ULW3 272 aaKnown RBP17.84■□□□□ 0.45
LSP1-213ENST00000464670 NUP98P52948 1817 aa17.84■□□□□ 0.45
LSP1-213ENST00000464670 PRAMEF22A3QJZ6 481 aa17.83■□□□□ 0.44
LSP1-213ENST00000464670 PHACTR3Q96KR7 559 aa17.83■□□□□ 0.44
LSP1-213ENST00000464670 RIC1Q4ADV7 1423 aa17.82■□□□□ 0.44
LSP1-213ENST00000464670 NBPF26B4DH59 902 aa17.82■□□□□ 0.44
LSP1-213ENST00000464670 PRKAR2BP31323 418 aa17.82■□□□□ 0.44
LSP1-213ENST00000464670 ECE1P42892 770 aa17.82■□□□□ 0.44
LSP1-213ENST00000464670 EIF6P56537 245 aaKnown RBP17.82■□□□□ 0.44
LSP1-213ENST00000464670 NBPF10Q6P3W6 841 aaKnown RBP17.82■□□□□ 0.44
LSP1-213ENST00000464670 NBPF15Q8N660 670 aa17.82■□□□□ 0.44
LSP1-213ENST00000464670 RSPH6AQ9H0K4 717 aa17.82■□□□□ 0.44
LSP1-213ENST00000464670 COL4A5P29400 1685 aa17.81■□□□□ 0.44
LSP1-213ENST00000464670 GTF2E1P29083 439 aaPredicted RBP17.81■□□□□ 0.44
LSP1-213ENST00000464670 LMOD1P29536 600 aaPredicted RBP17.81■□□□□ 0.44
LSP1-213ENST00000464670 FAM161AQ3B820 660 aa17.81■□□□□ 0.44
LSP1-213ENST00000464670 RTF1Q92541 710 aaKnown RBP17.81■□□□□ 0.44
LSP1-213ENST00000464670 NYXQ9GZU5 481 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms