RNA–Protein interactions for RNA: ENST00000464620.1

ARHGEF16-206, Transcript of Rho guanine nucleotide exchange factor 16, humanhuman

TSL 1 (best)

Gene ARHGEF16, Length 1,403 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16-206ENST00000464620 STYK1Q6J9G0 422 aa20.55■□□□□ 0.88
ARHGEF16-206ENST00000464620 MASTLQ96GX5 879 aa20.55■□□□□ 0.88
ARHGEF16-206ENST00000464620 MIS18AQ9NYP9 233 aa20.55■□□□□ 0.88
ARHGEF16-206ENST00000464620 GLTPD2A6NH11 291 aa20.54■□□□□ 0.88
ARHGEF16-206ENST00000464620 RALBP1Q15311 655 aa20.54■□□□□ 0.88
ARHGEF16-206ENST00000464620 NIP7Q9Y221 180 aaKnown RBP eCLIP20.54■□□□□ 0.88
ARHGEF16-206ENST00000464620 SRGNP10124 158 aa20.53■□□□□ 0.88
ARHGEF16-206ENST00000464620 VEGFAP15692 232 aaPredicted RBP20.53■□□□□ 0.88
ARHGEF16-206ENST00000464620 SMC1BQ8NDV3 1235 aa20.53■□□□□ 0.88
ARHGEF16-206ENST00000464620 DLEC1Q9Y238 1755 aa20.52■□□□□ 0.88
ARHGEF16-206ENST00000464620 NFKBIEO00221 500 aa20.52■□□□□ 0.87
ARHGEF16-206ENST00000464620 ERFEQ4G0M1 354 aa20.52■□□□□ 0.87
ARHGEF16-206ENST00000464620 PLEKHF1Q96S99 279 aa20.52■□□□□ 0.87
ARHGEF16-206ENST00000464620 TAOK3Q9H2K8 898 aa20.52■□□□□ 0.87
ARHGEF16-206ENST00000464620 NBPF26B4DH59 902 aa20.51■□□□□ 0.87
ARHGEF16-206ENST00000464620 PRPF40BQ6NWY9 871 aaKnown RBP20.51■□□□□ 0.87
ARHGEF16-206ENST00000464620 NBPF10Q6P3W6 841 aaKnown RBP20.51■□□□□ 0.87
ARHGEF16-206ENST00000464620 KIF6Q6ZMV9 814 aa20.51■□□□□ 0.87
ARHGEF16-206ENST00000464620 NGEFQ8N5V2 710 aa20.51■□□□□ 0.87
ARHGEF16-206ENST00000464620 NBPF15Q8N660 670 aa20.51■□□□□ 0.87
ARHGEF16-206ENST00000464620 FAM177BA6PVY3 158 aa20.5■□□□□ 0.87
ARHGEF16-206ENST00000464620 NPR1P16066 1061 aa20.5■□□□□ 0.87
ARHGEF16-206ENST00000464620 NYXQ9GZU5 481 aa20.5■□□□□ 0.87
ARHGEF16-206ENST00000464620 RRP7AQ9Y3A4 280 aaKnown RBP20.5■□□□□ 0.87
ARHGEF16-206ENST00000464620 EIF4A1P60842 406 aaKnown RBP20.49■□□□□ 0.87
ARHGEF16-206ENST00000464620 LMOD3Q0VAK6 560 aa20.49■□□□□ 0.87
ARHGEF16-206ENST00000464620 LTBP3Q9NS15 1303 aa20.48■□□□□ 0.87
ARHGEF16-206ENST00000464620 TNRC6CQ9HCJ0 1690 aaKnown RBP20.48■□□□□ 0.87
ARHGEF16-206ENST00000464620 ERVV-1B6SEH8 477 aa20.47■□□□□ 0.87
ARHGEF16-206ENST00000464620 ALDH1B1P30837 517 aa20.47■□□□□ 0.87
ARHGEF16-206ENST00000464620 RIPK4P57078 832 aa20.47■□□□□ 0.87
ARHGEF16-206ENST00000464620 TSPYL4Q9UJ04 414 aa20.47■□□□□ 0.87
ARHGEF16-206ENST00000464620 BCORQ6W2J9 1755 aa20.47■□□□□ 0.87
ARHGEF16-206ENST00000464620 SBF1O95248 1867 aa20.47■□□□□ 0.87
ARHGEF16-206ENST00000464620 MYL6BP14649 208 aa20.46■□□□□ 0.87
ARHGEF16-206ENST00000464620 PRELPP51888 382 aa20.46■□□□□ 0.87
ARHGEF16-206ENST00000464620 CCDC93Q567U6 631 aa20.46■□□□□ 0.87
ARHGEF16-206ENST00000464620 THUMPD2Q9BTF0 503 aaKnown RBP20.46■□□□□ 0.87
ARHGEF16-206ENST00000464620 ANKRD31Q8N7Z5 1873 aa20.45■□□□□ 0.86
ARHGEF16-206ENST00000464620 HLFQ16534 295 aa20.44■□□□□ 0.86
ARHGEF16-206ENST00000464620 ERBB4Q15303 1308 aa20.44■□□□□ 0.86
ARHGEF16-206ENST00000464620 MAP3K15Q6ZN16 1313 aa20.44■□□□□ 0.86
ARHGEF16-206ENST00000464620 KLRG2A4D1S0 409 aaPredicted RBP20.44■□□□□ 0.86
ARHGEF16-206ENST00000464620 DDX10Q13206 875 aaKnown RBP20.44■□□□□ 0.86
ARHGEF16-206ENST00000464620 RTKN2Q8IZC4 609 aa20.44■□□□□ 0.86
ARHGEF16-206ENST00000464620 BABAM1Q9NWV8 329 aa20.44■□□□□ 0.86
ARHGEF16-206ENST00000464620 WDR43Q15061 677 aaKnown RBP eCLIP20.43■□□□□ 0.86
ARHGEF16-206ENST00000464620 MYBBP1AQ9BQG0 1328 aaKnown RBP20.42■□□□□ 0.86
ARHGEF16-206ENST00000464620 ZBTB3Q9H5J0 574 aa20.42■□□□□ 0.86
ARHGEF16-206ENST00000464620 EIF2S2P20042 333 aaKnown RBP20.41■□□□□ 0.86
ARHGEF16-206ENST00000464620 DNAJC5GQ8N7S2 189 aa20.41■□□□□ 0.86
ARHGEF16-206ENST00000464620 RPGRQ92834 1020 aaKnown RBP20.41■□□□□ 0.86
ARHGEF16-206ENST00000464620 COL11A2P13942 1736 aaPredicted RBP20.41■□□□□ 0.86
ARHGEF16-206ENST00000464620 TIAM2Q8IVF5 1701 aa20.4■□□□□ 0.86
ARHGEF16-206ENST00000464620 FKBP4Q02790 459 aaKnown RBP eCLIP20.4■□□□□ 0.86
ARHGEF16-206ENST00000464620 TTLL7Q6ZT98 887 aa20.4■□□□□ 0.86
ARHGEF16-206ENST00000464620 PPP1R42Q7Z4L9 355 aa20.4■□□□□ 0.86
ARHGEF16-206ENST00000464620 LAMB4A4D0S4 1761 aa20.4■□□□□ 0.86
ARHGEF16-206ENST00000464620 IQCA1LA6NCM1 817 aa20.39■□□□□ 0.85
ARHGEF16-206ENST00000464620 GPTP24298 496 aa20.39■□□□□ 0.85
ARHGEF16-206ENST00000464620 TMPOP42166 694 aaKnown RBP20.39■□□□□ 0.85
ARHGEF16-206ENST00000464620 NEUROD2Q15784 382 aa20.39■□□□□ 0.85
ARHGEF16-206ENST00000464620 KLRG1Q96E93 195 aa20.39■□□□□ 0.85
ARHGEF16-206ENST00000464620 TMX4Q9H1E5 349 aaPredicted RBP20.39■□□□□ 0.85
ARHGEF16-206ENST00000464620 KDM3BQ7LBC6 1761 aa20.39■□□□□ 0.85
ARHGEF16-206ENST00000464620 IFFO2Q5TF58 517 aa20.38■□□□□ 0.85
ARHGEF16-206ENST00000464620 NUTM1Q86Y26 1132 aa20.38■□□□□ 0.85
ARHGEF16-206ENST00000464620 C7orf43Q8WVR3 580 aa20.38■□□□□ 0.85
ARHGEF16-206ENST00000464620 DLG5Q8TDM6 1919 aa20.38■□□□□ 0.85
ARHGEF16-206ENST00000464620 PARP10Q53GL7 1025 aa20.37■□□□□ 0.85
ARHGEF16-206ENST00000464620 CC2D2BQ6DHV5 1058 aa20.37■□□□□ 0.85
ARHGEF16-206ENST00000464620 GIGYF2Q6Y7W6 1299 aaKnown RBP20.37■□□□□ 0.85
ARHGEF16-206ENST00000464620 SLX4Q8IY92 1834 aa20.37■□□□□ 0.85
ARHGEF16-206ENST00000464620 DDNO94850 711 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF16-206ENST00000464620 HTRA3P83110 453 aa20.36■□□□□ 0.85
ARHGEF16-206ENST00000464620 GRIPAP1Q4V328 841 aa20.36■□□□□ 0.85
ARHGEF16-206ENST00000464620 JDP2Q8WYK2 163 aa20.36■□□□□ 0.85
ARHGEF16-206ENST00000464620 RBM17Q96I25 401 aaKnown RBP20.36■□□□□ 0.85
ARHGEF16-206ENST00000464620 FER1L6Q2WGJ9 1857 aa20.36■□□□□ 0.85
ARHGEF16-206ENST00000464620 WDR90Q96KV7 1748 aa20.36■□□□□ 0.85
ARHGEF16-206ENST00000464620 IBTKQ9P2D0 1353 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF16-206ENST00000464620 RUNDC1Q96C34 613 aa20.36■□□□□ 0.85
ARHGEF16-206ENST00000464620 ZNF277Q9NRM2 450 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF16-206ENST00000464620 POTECB2RU33 542 aa20.35■□□□□ 0.85
ARHGEF16-206ENST00000464620 CRY2Q49AN0 593 aa20.35■□□□□ 0.85
ARHGEF16-206ENST00000464620 HSP90AB3PQ58FF7 597 aa20.35■□□□□ 0.85
ARHGEF16-206ENST00000464620 CCDC146Q8IYE0 955 aa20.35■□□□□ 0.85
ARHGEF16-206ENST00000464620 ZNF34Q8IZ26 560 aa20.35■□□□□ 0.85
ARHGEF16-206ENST00000464620 LAS1LQ9Y4W2 734 aaKnown RBP20.35■□□□□ 0.85
ARHGEF16-206ENST00000464620 CCDC88AQ3V6T2 1871 aa20.35■□□□□ 0.85
ARHGEF16-206ENST00000464620 SUSD4Q5VX71 490 aa20.34■□□□□ 0.85
ARHGEF16-206ENST00000464620 CHADLQ6NUI6 762 aa20.34■□□□□ 0.85
ARHGEF16-206ENST00000464620 SYNE4Q8N205 404 aa20.34■□□□□ 0.85
ARHGEF16-206ENST00000464620 NLRP3Q96P20 1036 aa20.34■□□□□ 0.85
ARHGEF16-206ENST00000464620 ARFGEF2Q9Y6D5 1785 aa20.33■□□□□ 0.84
ARHGEF16-206ENST00000464620 IARSP41252 1262 aaKnown RBP20.33■□□□□ 0.84
ARHGEF16-206ENST00000464620 PSMD1Q99460 953 aa20.33■□□□□ 0.84
ARHGEF16-206ENST00000464620 UTP14AQ9BVJ6 771 aaKnown RBP20.33■□□□□ 0.84
ARHGEF16-206ENST00000464620 UBN2Q6ZU65 1347 aa20.33■□□□□ 0.84
ARHGEF16-206ENST00000464620 CACNA1SQ13698 1873 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms