RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-209ENST00000464576 HTRA3P83110 453 aa12.54□□□□□ -0.4
PTPN18-209ENST00000464576 MASTLQ96GX5 879 aa12.54□□□□□ -0.4
PTPN18-209ENST00000464576 TAOK3Q9H2K8 898 aa12.54□□□□□ -0.4
PTPN18-209ENST00000464576 ANKRD31Q8N7Z5 1873 aa12.54□□□□□ -0.4
PTPN18-209ENST00000464576 CEMIPQ8WUJ3 1361 aa12.54□□□□□ -0.4
PTPN18-209ENST00000464576 PCNTO95613 3336 aa12.54□□□□□ -0.4
PTPN18-209ENST00000464576 DICER1Q9UPY3 1922 aaKnown RBP12.53□□□□□ -0.4
PTPN18-209ENST00000464576 NFKBIEO00221 500 aa12.53□□□□□ -0.4
PTPN18-209ENST00000464576 HTATSF1O43719 755 aaKnown RBP12.53□□□□□ -0.4
PTPN18-209ENST00000464576 PIP4K2AP48426 406 aaPredicted RBP12.53□□□□□ -0.4
PTPN18-209ENST00000464576 STYK1Q6J9G0 422 aa12.53□□□□□ -0.4
PTPN18-209ENST00000464576 CLEC4GQ6UXB4 293 aa12.53□□□□□ -0.4
PTPN18-209ENST00000464576 TPTE2Q6XPS3 522 aa12.53□□□□□ -0.4
PTPN18-209ENST00000464576 USP16Q9Y5T5 823 aa12.53□□□□□ -0.4
PTPN18-209ENST00000464576 TAF7Q15545 349 aaPredicted RBP12.52□□□□□ -0.41
PTPN18-209ENST00000464576 PRPF40BQ6NWY9 871 aaKnown RBP12.52□□□□□ -0.41
PTPN18-209ENST00000464576 FER1L6Q2WGJ9 1857 aa12.51□□□□□ -0.41
PTPN18-209ENST00000464576 FAM177BA6PVY3 158 aa12.51□□□□□ -0.41
PTPN18-209ENST00000464576 SRGNP10124 158 aa12.51□□□□□ -0.41
PTPN18-209ENST00000464576 DCTN1Q14203 1278 aa12.51□□□□□ -0.41
PTPN18-209ENST00000464576 PNNQ9H307 717 aaKnown RBP12.51□□□□□ -0.41
PTPN18-209ENST00000464576 NIP7Q9Y221 180 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTPN18-209ENST00000464576 BCORQ6W2J9 1755 aa12.51□□□□□ -0.41
PTPN18-209ENST00000464576 NPR1P16066 1061 aa12.5□□□□□ -0.41
PTPN18-209ENST00000464576 PRELPP51888 382 aa12.5□□□□□ -0.41
PTPN18-209ENST00000464576 PNISRQ8TF01 805 aaKnown RBP12.5□□□□□ -0.41
PTPN18-209ENST00000464576 COL11A2P13942 1736 aaPredicted RBP12.5□□□□□ -0.41
PTPN18-209ENST00000464576 SLX4Q8IY92 1834 aa12.5□□□□□ -0.41
PTPN18-209ENST00000464576 LTBP3Q9NS15 1303 aa12.49□□□□□ -0.41
PTPN18-209ENST00000464576 MAPK8IP3Q9UPT6 1336 aa12.49□□□□□ -0.41
PTPN18-209ENST00000464576 PRAMEF22A3QJZ6 481 aa12.49□□□□□ -0.41
PTPN18-209ENST00000464576 ALDH1B1P30837 517 aa12.49□□□□□ -0.41
PTPN18-209ENST00000464576 CCDC93Q567U6 631 aa12.49□□□□□ -0.41
PTPN18-209ENST00000464576 NGEFQ8N5V2 710 aa12.49□□□□□ -0.41
PTPN18-209ENST00000464576 IQCA1LA6NCM1 817 aa12.48□□□□□ -0.41
PTPN18-209ENST00000464576 KIF6Q6ZMV9 814 aa12.48□□□□□ -0.41
PTPN18-209ENST00000464576 NYXQ9GZU5 481 aa12.48□□□□□ -0.41
PTPN18-209ENST00000464576 MIS18AQ9NYP9 233 aa12.48□□□□□ -0.41
PTPN18-209ENST00000464576 DDNO94850 711 aaPredicted RBP12.47□□□□□ -0.41
PTPN18-209ENST00000464576 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
PTPN18-209ENST00000464576 RTKN2Q8IZC4 609 aa12.47□□□□□ -0.41
PTPN18-209ENST00000464576 JMYQ8N9B5 988 aa12.47□□□□□ -0.41
PTPN18-209ENST00000464576 RRP7AQ9Y3A4 280 aaKnown RBP12.47□□□□□ -0.41
PTPN18-209ENST00000464576 ARFGEF2Q9Y6D5 1785 aa12.47□□□□□ -0.41
PTPN18-209ENST00000464576 NBPF26B4DH59 902 aa12.46□□□□□ -0.41
PTPN18-209ENST00000464576 RGL2O15211 777 aa12.46□□□□□ -0.41
PTPN18-209ENST00000464576 NBPF10Q6P3W6 841 aaKnown RBP12.46□□□□□ -0.41
PTPN18-209ENST00000464576 NBPF15Q8N660 670 aa12.46□□□□□ -0.41
PTPN18-209ENST00000464576 TMX4Q9H1E5 349 aaPredicted RBP12.46□□□□□ -0.41
PTPN18-209ENST00000464576 CLEC11AQ9Y240 323 aa12.46□□□□□ -0.41
PTPN18-209ENST00000464576 DLG5Q8TDM6 1919 aa12.46□□□□□ -0.42
PTPN18-209ENST00000464576 MYL6BP14649 208 aa12.45□□□□□ -0.42
PTPN18-209ENST00000464576 FKBP4Q02790 459 aaKnown RBP eCLIP12.45□□□□□ -0.42
PTPN18-209ENST00000464576 JDP2Q8WYK2 163 aa12.45□□□□□ -0.42
PTPN18-209ENST00000464576 RPGRQ92834 1020 aaKnown RBP12.45□□□□□ -0.42
PTPN18-209ENST00000464576 LAMB4A4D0S4 1761 aa12.44□□□□□ -0.42
PTPN18-209ENST00000464576 NFE2L2Q16236 605 aa12.44□□□□□ -0.42
PTPN18-209ENST00000464576 HLFQ16534 295 aa12.44□□□□□ -0.42
PTPN18-209ENST00000464576 EAPPQ56P03 285 aaPredicted RBP12.44□□□□□ -0.42
PTPN18-209ENST00000464576 ZNF277Q9NRM2 450 aaPredicted RBP12.44□□□□□ -0.42
PTPN18-209ENST00000464576 SCN4AP35499 1836 aa12.44□□□□□ -0.42
PTPN18-209ENST00000464576 NUP98P52948 1817 aa12.44□□□□□ -0.42
PTPN18-209ENST00000464576 POTECB2RU33 542 aa12.43□□□□□ -0.42
PTPN18-209ENST00000464576 ERVV-1B6SEH8 477 aa12.43□□□□□ -0.42
PTPN18-209ENST00000464576 LDHDQ86WU2 507 aa12.43□□□□□ -0.42
PTPN18-209ENST00000464576 TNS4Q8IZW8 715 aa12.43□□□□□ -0.42
PTPN18-209ENST00000464576 MAP3K15Q6ZN16 1313 aa12.42□□□□□ -0.42
PTPN18-209ENST00000464576 KLRG2A4D1S0 409 aaPredicted RBP12.42□□□□□ -0.42
PTPN18-209ENST00000464576 CAPN15O75808 1086 aa12.42□□□□□ -0.42
PTPN18-209ENST00000464576 GPTP24298 496 aa12.42□□□□□ -0.42
PTPN18-209ENST00000464576 IARSP41252 1262 aaKnown RBP12.42□□□□□ -0.42
PTPN18-209ENST00000464576 COL13A1Q5TAT6 717 aaPredicted RBP12.42□□□□□ -0.42
PTPN18-209ENST00000464576 CC2D2BQ6DHV5 1058 aa12.42□□□□□ -0.42
PTPN18-209ENST00000464576 NUTM1Q86Y26 1132 aa12.42□□□□□ -0.42
PTPN18-209ENST00000464576 SYNE4Q8N205 404 aa12.42□□□□□ -0.42
PTPN18-209ENST00000464576 C7orf43Q8WVR3 580 aa12.42□□□□□ -0.42
PTPN18-209ENST00000464576 ZBTB3Q9H5J0 574 aa12.42□□□□□ -0.42
PTPN18-209ENST00000464576 CREBZFQ9NS37 354 aa12.42□□□□□ -0.42
PTPN18-209ENST00000464576 HACL1Q9UJ83 578 aa12.42□□□□□ -0.42
PTPN18-209ENST00000464576 HSPA1AP0DMV8 641 aaKnown RBP12.41□□□□□ -0.42
PTPN18-209ENST00000464576 HSPA1BP0DMV9 641 aaKnown RBP12.41□□□□□ -0.42
PTPN18-209ENST00000464576 EIF6P56537 245 aaKnown RBP12.41□□□□□ -0.42
PTPN18-209ENST00000464576 EIF4A1P60842 406 aaKnown RBP12.41□□□□□ -0.42
PTPN18-209ENST00000464576 GRIPAP1Q4V328 841 aa12.41□□□□□ -0.42
PTPN18-209ENST00000464576 PPP1R42Q7Z4L9 355 aa12.41□□□□□ -0.42
PTPN18-209ENST00000464576 PNMA8AQ86V59 439 aaPredicted RBP12.41□□□□□ -0.42
PTPN18-209ENST00000464576 RBM17Q96I25 401 aaKnown RBP12.41□□□□□ -0.42
PTPN18-209ENST00000464576 TAF1DQ9H5J8 278 aaPredicted RBP12.41□□□□□ -0.42
PTPN18-209ENST00000464576 MKRN1Q9UHC7 482 aaKnown RBP12.41□□□□□ -0.42
PTPN18-209ENST00000464576 TSPYL4Q9UJ04 414 aa12.41□□□□□ -0.42
PTPN18-209ENST00000464576 KDM3BQ7LBC6 1761 aa12.41□□□□□ -0.42
PTPN18-209ENST00000464576 EIF2S2P20042 333 aaKnown RBP12.4□□□□□ -0.42
PTPN18-209ENST00000464576 LMOD1P29536 600 aaPredicted RBP12.4□□□□□ -0.42
PTPN18-209ENST00000464576 OLFM4Q6UX06 510 aa12.4□□□□□ -0.42
PTPN18-209ENST00000464576 L3MBTL3Q96JM7 780 aaPredicted RBP12.4□□□□□ -0.42
PTPN18-209ENST00000464576 THUMPD2Q9BTF0 503 aaKnown RBP12.4□□□□□ -0.42
PTPN18-209ENST00000464576 GJA3Q9Y6H8 435 aa12.4□□□□□ -0.42
PTPN18-209ENST00000464576 TCERG1O14776 1098 aaKnown RBP12.39□□□□□ -0.43
PTPN18-209ENST00000464576 POTEIP0CG38 1075 aa12.39□□□□□ -0.43
PTPN18-209ENST00000464576 POTEJP0CG39 1038 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms