RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 COL16A1Q07092 1604 aaPredicted RBP12.1□□□□□ -0.47
ATF3-207ENST00000464547 TOGARAM1Q9Y4F4 1720 aa12.09□□□□□ -0.47
ATF3-207ENST00000464547 GCKRQ14397 625 aa12.09□□□□□ -0.47
ATF3-207ENST00000464547 PLBD2Q8NHP8 589 aa12.09□□□□□ -0.47
ATF3-207ENST00000464547 USP26Q9BXU7 913 aa12.09□□□□□ -0.47
ATF3-207ENST00000464547 HSCBQ8IWL3 235 aa12.08□□□□□ -0.48
ATF3-207ENST00000464547 BICC1Q9H694 974 aaKnown RBP12.08□□□□□ -0.48
ATF3-207ENST00000464547 ANTXR1Q9H6X2 564 aa12.08□□□□□ -0.48
ATF3-207ENST00000464547 TUBGCP6Q96RT7 1819 aa12.08□□□□□ -0.48
ATF3-207ENST00000464547 ERC2O15083 957 aa12.07□□□□□ -0.48
ATF3-207ENST00000464547 A1BGP04217 495 aa12.07□□□□□ -0.48
ATF3-207ENST00000464547 OS9Q13438 667 aaPredicted RBP12.07□□□□□ -0.48
ATF3-207ENST00000464547 NFKBIBQ15653 356 aa12.07□□□□□ -0.48
ATF3-207ENST00000464547 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
ATF3-207ENST00000464547 EPHA10Q5JZY3 1008 aa12.07□□□□□ -0.48
ATF3-207ENST00000464547 TMOD3Q9NYL9 352 aa12.07□□□□□ -0.48
ATF3-207ENST00000464547 PA2G4Q9UQ80 394 aaKnown RBP12.07□□□□□ -0.48
ATF3-207ENST00000464547 USP42Q9H9J4 1324 aaKnown RBP12.07□□□□□ -0.48
ATF3-207ENST00000464547 ARFGEF2Q9Y6D5 1785 aa12.06□□□□□ -0.48
ATF3-207ENST00000464547 PTCD1O75127 700 aaKnown RBP12.06□□□□□ -0.48
ATF3-207ENST00000464547 TTLL7Q6ZT98 887 aa12.06□□□□□ -0.48
ATF3-207ENST00000464547 ERC1Q8IUD2 1116 aa12.06□□□□□ -0.48
ATF3-207ENST00000464547 PI4K2BQ8TCG2 481 aa12.06□□□□□ -0.48
ATF3-207ENST00000464547 PIGBQ92521 554 aa12.06□□□□□ -0.48
ATF3-207ENST00000464547 SLKQ9H2G2 1235 aaPredicted RBP12.06□□□□□ -0.48
ATF3-207ENST00000464547 COL15A1P39059 1388 aa12.05□□□□□ -0.48
ATF3-207ENST00000464547 TRIM6-TRIM34B2RNG4 842 aa12.05□□□□□ -0.48
ATF3-207ENST00000464547 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
ATF3-207ENST00000464547 REC8O95072 547 aa12.05□□□□□ -0.48
ATF3-207ENST00000464547 CHMLP26374 656 aa12.05□□□□□ -0.48
ATF3-207ENST00000464547 UNC5CLQ8IV45 518 aa12.05□□□□□ -0.48
ATF3-207ENST00000464547 JARID2Q92833 1246 aaPredicted RBP12.05□□□□□ -0.48
ATF3-207ENST00000464547 RILPL2Q969X0 211 aa12.05□□□□□ -0.48
ATF3-207ENST00000464547 ESYT1Q9BSJ8 1104 aa12.05□□□□□ -0.48
ATF3-207ENST00000464547 ATG3Q9NT62 314 aa12.05□□□□□ -0.48
ATF3-207ENST00000464547 PLCH1Q4KWH8 1693 aa12.05□□□□□ -0.48
ATF3-207ENST00000464547 PHLPP1O60346 1717 aa12.04□□□□□ -0.48
ATF3-207ENST00000464547 SASH1O94885 1247 aa12.04□□□□□ -0.48
ATF3-207ENST00000464547 CASP7P55210 303 aa12.04□□□□□ -0.48
ATF3-207ENST00000464547 G3BP1Q13283 466 aaKnown RBP eCLIP12.04□□□□□ -0.48
ATF3-207ENST00000464547 SPRYD3Q8NCJ5 442 aa12.04□□□□□ -0.48
ATF3-207ENST00000464547 RBM42Q9BTD8 480 aaKnown RBP12.04□□□□□ -0.48
ATF3-207ENST00000464547 ASAP1Q9ULH1 1129 aa12.04□□□□□ -0.48
ATF3-207ENST00000464547 TTC41PQ6P2S7 1318 aa12.04□□□□□ -0.48
ATF3-207ENST00000464547 AFDNP55196 1824 aaKnown RBP12.03□□□□□ -0.48
ATF3-207ENST00000464547 H7C1W4 665 aa12.03□□□□□ -0.48
ATF3-207ENST00000464547 EXOC5O00471 708 aa12.03□□□□□ -0.48
ATF3-207ENST00000464547 ADAMTS2O95450 1211 aa12.03□□□□□ -0.48
ATF3-207ENST00000464547 RFX5P48382 616 aaPredicted RBP12.03□□□□□ -0.48
ATF3-207ENST00000464547 RABEP1Q15276 862 aa12.03□□□□□ -0.48
ATF3-207ENST00000464547 RABL6Q3YEC7 729 aaPredicted RBP12.03□□□□□ -0.48
ATF3-207ENST00000464547 DNAJC10Q8IXB1 793 aa12.03□□□□□ -0.48
ATF3-207ENST00000464547 VSIG10Q8N0Z9 540 aa12.03□□□□□ -0.48
ATF3-207ENST00000464547 CLASRPQ8N2M8 674 aaKnown RBP12.03□□□□□ -0.48
ATF3-207ENST00000464547 TEX13AQ9BXU3 409 aaPredicted RBP12.03□□□□□ -0.48
ATF3-207ENST00000464547 LRP6O75581 1613 aa12.03□□□□□ -0.48
ATF3-207ENST00000464547 NUP188Q5SRE5 1749 aa12.03□□□□□ -0.48
ATF3-207ENST00000464547 A0A087WZG4 1122 aa12.02□□□□□ -0.49
ATF3-207ENST00000464547 CD2BP2O95400 341 aaKnown RBP12.02□□□□□ -0.49
ATF3-207ENST00000464547 MAP4K4O95819 1239 aaPredicted RBP12.02□□□□□ -0.49
ATF3-207ENST00000464547 UBE3BQ7Z3V4 1068 aa12.02□□□□□ -0.49
ATF3-207ENST00000464547 AACSQ86V21 672 aa12.02□□□□□ -0.49
ATF3-207ENST00000464547 COPRSQ9NQ92 184 aa12.02□□□□□ -0.49
ATF3-207ENST00000464547 ECHDC1Q9NTX5 307 aa12.02□□□□□ -0.49
ATF3-207ENST00000464547 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.02□□□□□ -0.49
ATF3-207ENST00000464547 NRAPQ86VF7 1730 aa12.02□□□□□ -0.49
ATF3-207ENST00000464547 WNK3Q9BYP7 1800 aa12.02□□□□□ -0.49
ATF3-207ENST00000464547 FRAT2O75474 233 aaPredicted RBP12.01□□□□□ -0.49
ATF3-207ENST00000464547 GLRX3O76003 335 aaKnown RBP12.01□□□□□ -0.49
ATF3-207ENST00000464547 IFIT2P09913 472 aaKnown RBP12.01□□□□□ -0.49
ATF3-207ENST00000464547 KLHDC4Q8TBB5 520 aa12.01□□□□□ -0.49
ATF3-207ENST00000464547 CDCA7Q9BWT1 371 aaPredicted RBP12.01□□□□□ -0.49
ATF3-207ENST00000464547 ZBTB3Q9H5J0 574 aa12.01□□□□□ -0.49
ATF3-207ENST00000464547 CWC25Q9NXE8 425 aaPredicted RBP12.01□□□□□ -0.49
ATF3-207ENST00000464547 ITGB4P16144 1822 aa12.01□□□□□ -0.49
ATF3-207ENST00000464547 SPATA31A1Q5TZJ5 1347 aa12.01□□□□□ -0.49
ATF3-207ENST00000464547 BCL9O00512 1426 aa12.01□□□□□ -0.49
ATF3-207ENST00000464547 K7ELQ4 463 aaPredicted RBP12□□□□□ -0.49
ATF3-207ENST00000464547 DDIT3P35638 169 aa12□□□□□ -0.49
ATF3-207ENST00000464547 FOXO4P98177 505 aa12□□□□□ -0.49
ATF3-207ENST00000464547 CNTROBQ8N137 903 aa12□□□□□ -0.49
ATF3-207ENST00000464547 EAF2Q96CJ1 260 aaPredicted RBP12□□□□□ -0.49
ATF3-207ENST00000464547 GPATCH3Q96I76 525 aa12□□□□□ -0.49
ATF3-207ENST00000464547 ISCA1Q9BUE6 129 aa12□□□□□ -0.49
ATF3-207ENST00000464547 SIL1Q9H173 461 aa12□□□□□ -0.49
ATF3-207ENST00000464547 CHMP5Q9NZZ3 219 aa12□□□□□ -0.49
ATF3-207ENST00000464547 TJP1Q07157 1748 aa12□□□□□ -0.49
ATF3-207ENST00000464547 NUTM2BA6NNL0 878 aaPredicted RBP11.99□□□□□ -0.49
ATF3-207ENST00000464547 NUTM2EB1AL46 878 aaPredicted RBP11.99□□□□□ -0.49
ATF3-207ENST00000464547 TOM1O60784 492 aa11.99□□□□□ -0.49
ATF3-207ENST00000464547 STARD3NLO95772 234 aa11.99□□□□□ -0.49
ATF3-207ENST00000464547 PIP4K2BP78356 416 aa11.99□□□□□ -0.49
ATF3-207ENST00000464547 PTPN12Q05209 780 aaKnown RBP11.99□□□□□ -0.49
ATF3-207ENST00000464547 NUTM2AQ8IVF1 878 aaPredicted RBP11.99□□□□□ -0.49
ATF3-207ENST00000464547 CCDC191Q8NCU4 936 aa11.99□□□□□ -0.49
ATF3-207ENST00000464547 SLC4A9Q96Q91 983 aa11.99□□□□□ -0.49
ATF3-207ENST00000464547 CCDC8Q9H0W5 538 aaPredicted RBP11.99□□□□□ -0.49
ATF3-207ENST00000464547 THRAP3Q9Y2W1 955 aaKnown RBP11.99□□□□□ -0.49
ATF3-207ENST00000464547 PRIM1P49642 420 aaKnown RBP11.98□□□□□ -0.49
ATF3-207ENST00000464547 MAPK8IP2Q13387 824 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms