RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 SART3Q15020 963 aaKnown RBP10.66□□□□□ -0.7
HPS4-208ENST00000464362 KLHL10Q6JEL2 608 aa10.66□□□□□ -0.7
HPS4-208ENST00000464362 COPS6Q7L5N1 327 aa10.65□□□□□ -0.7
HPS4-208ENST00000464362 CCDC186Q7Z3E2 898 aa10.65□□□□□ -0.7
HPS4-208ENST00000464362 PDCL3Q9H2J4 239 aa10.65□□□□□ -0.7
HPS4-208ENST00000464362 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.65□□□□□ -0.7
HPS4-208ENST00000464362 NDUFB9Q9Y6M9 179 aa10.65□□□□□ -0.7
HPS4-208ENST00000464362 V9GYY5 206 aaPredicted RBP10.65□□□□□ -0.7
HPS4-208ENST00000464362 PIK3R4Q99570 1358 aa10.65□□□□□ -0.7
HPS4-208ENST00000464362 GCC2Q8IWJ2 1684 aa10.65□□□□□ -0.7
HPS4-208ENST00000464362 SYT1P21579 422 aa10.65□□□□□ -0.7
HPS4-208ENST00000464362 KDM5CP41229 1560 aa10.65□□□□□ -0.7
HPS4-208ENST00000464362 PTPN14Q15678 1187 aa10.65□□□□□ -0.7
HPS4-208ENST00000464362 METTL24Q5JXM2 366 aa10.65□□□□□ -0.7
HPS4-208ENST00000464362 TEX35Q5T0J7 233 aa10.65□□□□□ -0.7
HPS4-208ENST00000464362 GADD45BO75293 160 aaPredicted RBP10.64□□□□□ -0.71
HPS4-208ENST00000464362 GPS2Q13227 327 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 XAGE3Q8WTP9 111 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 C8orf76Q96K31 380 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 MPHOSPH8Q99549 860 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 MBD5Q9P267 1494 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 TDO2P48775 406 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 NOLC1Q14978 699 aaKnown RBP eCLIP10.64□□□□□ -0.71
HPS4-208ENST00000464362 JMYQ8N9B5 988 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 NEK1Q96PY6 1258 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 U3KPZ7 1027 aaPredicted RBP10.64□□□□□ -0.71
HPS4-208ENST00000464362 HSP90AB3PQ58FF7 597 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 KCNH5Q8NCM2 988 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 TSC1Q92574 1164 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 DNAJC25Q9H1X3 360 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 F13A1P00488 732 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 NBPF7P0C2Y1 421 aaPredicted RBP10.64□□□□□ -0.71
HPS4-208ENST00000464362 IMMTQ16891 758 aaKnown RBP10.64□□□□□ -0.71
HPS4-208ENST00000464362 ANO6Q4KMQ2 910 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 TMEM63CQ9P1W3 806 aa10.64□□□□□ -0.71
HPS4-208ENST00000464362 EIF2AK4Q9P2K8 1649 aaKnown RBP10.63□□□□□ -0.71
HPS4-208ENST00000464362 CCDC69A6NI79 296 aa10.63□□□□□ -0.71
HPS4-208ENST00000464362 SFPQP23246 707 aaKnown RBP eCLIP10.63□□□□□ -0.71
HPS4-208ENST00000464362 NMIQ13287 307 aaPredicted RBP10.63□□□□□ -0.71
HPS4-208ENST00000464362 TRERF1Q96PN7 1200 aa10.63□□□□□ -0.71
HPS4-208ENST00000464362 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.63□□□□□ -0.71
HPS4-208ENST00000464362 PALD1Q9ULE6 856 aa10.63□□□□□ -0.71
HPS4-208ENST00000464362 NPATQ14207 1427 aa10.63□□□□□ -0.71
HPS4-208ENST00000464362 GOLGA8BA8MQT2 603 aa10.63□□□□□ -0.71
HPS4-208ENST00000464362 PPP4R3BQ5MIZ7 849 aa10.63□□□□□ -0.71
HPS4-208ENST00000464362 TRIM22Q8IYM9 498 aa10.63□□□□□ -0.71
HPS4-208ENST00000464362 MINDY4BA8MYZ0 360 aa10.63□□□□□ -0.71
HPS4-208ENST00000464362 MICU3Q86XE3 530 aa10.63□□□□□ -0.71
HPS4-208ENST00000464362 XBP1P17861 261 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 BICDL1Q6ZP65 573 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 ANKRD24Q8TF21 1146 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 HYPKQ9NX55 129 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.62□□□□□ -0.71
HPS4-208ENST00000464362 WDR7Q9Y4E6 1490 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 CHL1O00533 1208 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 LUZP1Q86V48 1076 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 CPLX3Q8WVH0 158 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 AIDAQ96BJ3 306 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 NOL10Q9BSC4 688 aaKnown RBP10.62□□□□□ -0.71
HPS4-208ENST00000464362 LMBRD1Q9NUN5 540 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 USP19O94966 1318 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 YTHDC2Q9H6S0 1430 aaKnown RBP10.62□□□□□ -0.71
HPS4-208ENST00000464362 GRM8O00222 908 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 URI1O94763 535 aaPredicted RBP10.62□□□□□ -0.71
HPS4-208ENST00000464362 HSP90B2PQ58FF3 399 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 LMBR1LQ6UX01 489 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 ANKRD13DQ6ZTN6 518 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 CCAR1Q8IX12 1150 aaKnown RBP10.62□□□□□ -0.71
HPS4-208ENST00000464362 CABLES1Q8TDN4 633 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 LRP2BPQ9P2M1 347 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 CTNNA3Q9UI47 895 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 PLA2R1Q13018 1463 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 UGGT1Q9NYU2 1555 aa10.62□□□□□ -0.71
HPS4-208ENST00000464362 SOS1Q07889 1333 aaPredicted RBP10.62□□□□□ -0.71
HPS4-208ENST00000464362 AMOTQ4VCS5 1084 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 ANTXR1Q9H6X2 564 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 LGR6Q9HBX8 967 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 USP16Q9Y5T5 823 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 BCORL1Q5H9F3 1711 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 ANO10Q9NW15 660 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 ORC3Q9UBD5 711 aaPredicted RBP10.61□□□□□ -0.71
HPS4-208ENST00000464362 ANAPC15P60006 121 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 CAGE1Q8TC20 777 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 BRMS1Q9HCU9 246 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 PTGS1P23219 599 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 Q6ZUG5 572 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 TMC6Q7Z403 805 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 AMOTL1Q8IY63 956 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 UBXN4Q92575 508 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 EDC3Q96F86 508 aaKnown RBP10.61□□□□□ -0.71
HPS4-208ENST00000464362 ZSWIM4Q9H7M6 989 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 DDX19AQ9NUU7 478 aaKnown RBP10.61□□□□□ -0.71
HPS4-208ENST00000464362 RAI14Q9P0K7 980 aa10.61□□□□□ -0.71
HPS4-208ENST00000464362 FAM227BQ96M60 508 aa10.6□□□□□ -0.71
HPS4-208ENST00000464362 ABCC1P33527 1531 aa10.6□□□□□ -0.71
HPS4-208ENST00000464362 RIMS2Q9UQ26 1411 aa10.6□□□□□ -0.71
HPS4-208ENST00000464362 INSRP06213 1382 aa10.6□□□□□ -0.71
HPS4-208ENST00000464362 OFD1O75665 1012 aa10.6□□□□□ -0.71
HPS4-208ENST00000464362 SLC4A8Q2Y0W8 1093 aa10.6□□□□□ -0.71
HPS4-208ENST00000464362 CCDC129Q6ZRS4 1044 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms