RNA–Protein interactions for RNA: ENST00000463479.1

PLOD3-210, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-210ENST00000463479 CNGB1Q14028 1251 aaPredicted RBP17.28■□□□□ 0.36
PLOD3-210ENST00000463479 PRPF40BQ6NWY9 871 aaKnown RBP17.28■□□□□ 0.36
PLOD3-210ENST00000463479 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
PLOD3-210ENST00000463479 POTEIP0CG38 1075 aa17.27■□□□□ 0.36
PLOD3-210ENST00000463479 POTEJP0CG39 1038 aa17.27■□□□□ 0.36
PLOD3-210ENST00000463479 STYK1Q6J9G0 422 aa17.27■□□□□ 0.36
PLOD3-210ENST00000463479 DZIP3Q86Y13 1208 aaKnown RBP17.27■□□□□ 0.36
PLOD3-210ENST00000463479 CNKSR1Q969H4 720 aa17.27■□□□□ 0.36
PLOD3-210ENST00000463479 ARFGEF2Q9Y6D5 1785 aa17.27■□□□□ 0.35
PLOD3-210ENST00000463479 PIP4K2AP48426 406 aaPredicted RBP17.26■□□□□ 0.35
PLOD3-210ENST00000463479 ST5P78524 1137 aa17.26■□□□□ 0.35
PLOD3-210ENST00000463479 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
PLOD3-210ENST00000463479 NPM2Q86SE8 214 aaKnown RBP17.26■□□□□ 0.35
PLOD3-210ENST00000463479 NPC1L1Q9UHC9 1359 aa17.26■□□□□ 0.35
PLOD3-210ENST00000463479 MASTLQ96GX5 879 aa17.25■□□□□ 0.35
PLOD3-210ENST00000463479 PHACTR3Q96KR7 559 aa17.25■□□□□ 0.35
PLOD3-210ENST00000463479 CREBZFQ9NS37 354 aa17.25■□□□□ 0.35
PLOD3-210ENST00000463479 USP16Q9Y5T5 823 aa17.25■□□□□ 0.35
PLOD3-210ENST00000463479 PCNTO95613 3336 aa17.24■□□□□ 0.35
PLOD3-210ENST00000463479 BTBD11A6QL63 1104 aa17.24■□□□□ 0.35
PLOD3-210ENST00000463479 MKRN1Q9UHC7 482 aaKnown RBP17.24■□□□□ 0.35
PLOD3-210ENST00000463479 PRAMEF22A3QJZ6 481 aa17.23■□□□□ 0.35
PLOD3-210ENST00000463479 PRKAR2BP31323 418 aa17.23■□□□□ 0.35
PLOD3-210ENST00000463479 SOGA3Q5TF21 947 aa17.23■□□□□ 0.35
PLOD3-210ENST00000463479 NBPF5PQ86XG9 351 aaPredicted RBP17.22■□□□□ 0.35
PLOD3-210ENST00000463479 C7orf43Q8WVR3 580 aa17.22■□□□□ 0.35
PLOD3-210ENST00000463479 RSPH6AQ9H0K4 717 aa17.22■□□□□ 0.35
PLOD3-210ENST00000463479 CCDC93Q567U6 631 aa17.2■□□□□ 0.34
PLOD3-210ENST00000463479 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
PLOD3-210ENST00000463479 L3MBTL3Q96JM7 780 aaPredicted RBP17.2■□□□□ 0.34
PLOD3-210ENST00000463479 SCN4AP35499 1836 aa17.19■□□□□ 0.34
PLOD3-210ENST00000463479 IQCA1LA6NCM1 817 aa17.19■□□□□ 0.34
PLOD3-210ENST00000463479 NPR1P16066 1061 aa17.19■□□□□ 0.34
PLOD3-210ENST00000463479 LDHDQ86WU2 507 aa17.19■□□□□ 0.34
PLOD3-210ENST00000463479 TAF1DQ9H5J8 278 aaPredicted RBP17.19■□□□□ 0.34
PLOD3-210ENST00000463479 ZNF652Q9Y2D9 606 aa17.19■□□□□ 0.34
PLOD3-210ENST00000463479 PASKQ96RG2 1323 aa17.19■□□□□ 0.34
PLOD3-210ENST00000463479 CNTNAP1P78357 1384 aa17.18■□□□□ 0.34
PLOD3-210ENST00000463479 SNRPA1P09661 255 aaKnown RBP17.18■□□□□ 0.34
PLOD3-210ENST00000463479 FKBP4Q02790 459 aaKnown RBP eCLIP17.18■□□□□ 0.34
PLOD3-210ENST00000463479 OLFM4Q6UX06 510 aa17.18■□□□□ 0.34
PLOD3-210ENST00000463479 MCM10Q7L590 875 aa17.18■□□□□ 0.34
PLOD3-210ENST00000463479 ZNF277Q9NRM2 450 aaPredicted RBP17.18■□□□□ 0.34
PLOD3-210ENST00000463479 ZNF541Q9H0D2 1346 aa17.18■□□□□ 0.34
PLOD3-210ENST00000463479 KLRG2A4D1S0 409 aaPredicted RBP17.17■□□□□ 0.34
PLOD3-210ENST00000463479 NBPF26B4DH59 902 aa17.17■□□□□ 0.34
PLOD3-210ENST00000463479 FOXN1O15353 648 aa17.17■□□□□ 0.34
PLOD3-210ENST00000463479 NBPF10Q6P3W6 841 aaKnown RBP17.17■□□□□ 0.34
PLOD3-210ENST00000463479 NBPF15Q8N660 670 aa17.17■□□□□ 0.34
PLOD3-210ENST00000463479 CFAP53Q96M91 514 aa17.17■□□□□ 0.34
PLOD3-210ENST00000463479 NIP7Q9Y221 180 aaKnown RBP eCLIP17.17■□□□□ 0.34
PLOD3-210ENST00000463479 FAM177BA6PVY3 158 aa17.16■□□□□ 0.34
PLOD3-210ENST00000463479 EAPPQ56P03 285 aaPredicted RBP17.16■□□□□ 0.34
PLOD3-210ENST00000463479 TPTE2Q6XPS3 522 aa17.16■□□□□ 0.34
PLOD3-210ENST00000463479 ITGBL1O95965 494 aaPredicted RBP17.15■□□□□ 0.34
PLOD3-210ENST00000463479 DCTN1Q14203 1278 aa17.15■□□□□ 0.34
PLOD3-210ENST00000463479 RTF1Q92541 710 aaKnown RBP17.15■□□□□ 0.34
PLOD3-210ENST00000463479 ADAMTSL1Q8N6G6 1762 aa17.15■□□□□ 0.34
PLOD3-210ENST00000463479 RGL2O15211 777 aa17.14■□□□□ 0.33
PLOD3-210ENST00000463479 U2AF1L5P0DN76 240 aaPredicted RBP17.14■□□□□ 0.33
PLOD3-210ENST00000463479 U2AF1Q01081 240 aaKnown RBP eCLIP17.14■□□□□ 0.33
PLOD3-210ENST00000463479 HLFQ16534 295 aa17.14■□□□□ 0.33
PLOD3-210ENST00000463479 HACL1Q9UJ83 578 aa17.14■□□□□ 0.33
PLOD3-210ENST00000463479 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
PLOD3-210ENST00000463479 TMEM88BA6NKF7 163 aa17.13■□□□□ 0.33
PLOD3-210ENST00000463479 EPHX2P34913 555 aa17.13■□□□□ 0.33
PLOD3-210ENST00000463479 VEGFBP49765 207 aa17.13■□□□□ 0.33
PLOD3-210ENST00000463479 RTKN2Q8IZC4 609 aa17.13■□□□□ 0.33
PLOD3-210ENST00000463479 IARSP41252 1262 aaKnown RBP17.12■□□□□ 0.33
PLOD3-210ENST00000463479 SYNE4Q8N205 404 aa17.12■□□□□ 0.33
PLOD3-210ENST00000463479 CLEC11AQ9Y240 323 aa17.12■□□□□ 0.33
PLOD3-210ENST00000463479 RNF123Q5XPI4 1314 aa17.12■□□□□ 0.33
PLOD3-210ENST00000463479 LAMB4A4D0S4 1761 aa17.11■□□□□ 0.33
PLOD3-210ENST00000463479 FZD9O00144 591 aa17.11■□□□□ 0.33
PLOD3-210ENST00000463479 ANP32CO43423 234 aa17.11■□□□□ 0.33
PLOD3-210ENST00000463479 ALDH1B1P30837 517 aa17.11■□□□□ 0.33
PLOD3-210ENST00000463479 PRDM10Q9NQV6 1147 aa17.11■□□□□ 0.33
PLOD3-210ENST00000463479 ABCC12Q96J65 1359 aa17.11■□□□□ 0.33
PLOD3-210ENST00000463479 SNED1Q8TER0 1413 aa17.11■□□□□ 0.33
PLOD3-210ENST00000463479 HTATSF1O43719 755 aaKnown RBP17.1■□□□□ 0.33
PLOD3-210ENST00000463479 GTF2E1P29083 439 aaPredicted RBP17.1■□□□□ 0.33
PLOD3-210ENST00000463479 PPP2R1AP30153 589 aa17.1■□□□□ 0.33
PLOD3-210ENST00000463479 CTCFP49711 727 aaPredicted RBP17.09■□□□□ 0.33
PLOD3-210ENST00000463479 TAF7Q15545 349 aaPredicted RBP17.09■□□□□ 0.33
PLOD3-210ENST00000463479 CRY2Q49AN0 593 aa17.09■□□□□ 0.33
PLOD3-210ENST00000463479 MAP1SQ66K74 1059 aaPredicted RBP17.09■□□□□ 0.33
PLOD3-210ENST00000463479 DIEXFQ68CQ4 756 aaKnown RBP17.09■□□□□ 0.33
PLOD3-210ENST00000463479 PNMA8AQ86V59 439 aaPredicted RBP17.09■□□□□ 0.33
PLOD3-210ENST00000463479 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
PLOD3-210ENST00000463479 CNTROBQ8N137 903 aa17.09■□□□□ 0.33
PLOD3-210ENST00000463479 AIDAQ96BJ3 306 aa17.09■□□□□ 0.33
PLOD3-210ENST00000463479 MIS18AQ9NYP9 233 aa17.09■□□□□ 0.33
PLOD3-210ENST00000463479 COL4A5P29400 1685 aa17.08■□□□□ 0.32
PLOD3-210ENST00000463479 GPC2Q8N158 579 aa17.08■□□□□ 0.32
PLOD3-210ENST00000463479 NGEFQ8N5V2 710 aa17.08■□□□□ 0.32
PLOD3-210ENST00000463479 PSMD1Q99460 953 aa17.08■□□□□ 0.32
PLOD3-210ENST00000463479 WBP1LQ9NX94 342 aa17.08■□□□□ 0.32
PLOD3-210ENST00000463479 RASSF10A6NK89 507 aa17.07■□□□□ 0.32
PLOD3-210ENST00000463479 RALBP1Q15311 655 aa17.07■□□□□ 0.32
PLOD3-210ENST00000463479 NUP98P52948 1817 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms