RNA–Protein interactions for RNA: ENST00000463197.1

CCR9-205, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 4

Gene CCR9, Length 349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-205ENST00000463197 DDNO94850 711 aaPredicted RBP7.58□□□□□ -1.2
CCR9-205ENST00000463197 PDE6BP35913 854 aa7.58□□□□□ -1.2
CCR9-205ENST00000463197 PDIA6Q15084 440 aa7.58□□□□□ -1.2
CCR9-205ENST00000463197 PRPF40BQ6NWY9 871 aaKnown RBP7.58□□□□□ -1.2
CCR9-205ENST00000463197 C3orf67Q6ZVT6 689 aa7.58□□□□□ -1.2
CCR9-205ENST00000463197 NGEFQ8N5V2 710 aa7.58□□□□□ -1.2
CCR9-205ENST00000463197 VIRMAQ69YN4 1812 aaKnown RBP7.57□□□□□ -1.2
CCR9-205ENST00000463197 KDM2BQ8NHM5 1336 aa7.57□□□□□ -1.2
CCR9-205ENST00000463197 VEGFAP15692 232 aaPredicted RBP7.57□□□□□ -1.2
CCR9-205ENST00000463197 FSTL1Q12841 308 aa7.57□□□□□ -1.2
CCR9-205ENST00000463197 PROSER3Q2NL68 480 aa7.57□□□□□ -1.2
CCR9-205ENST00000463197 STYK1Q6J9G0 422 aa7.57□□□□□ -1.2
CCR9-205ENST00000463197 CLEC4GQ6UXB4 293 aa7.57□□□□□ -1.2
CCR9-205ENST00000463197 JMYQ8N9B5 988 aa7.57□□□□□ -1.2
CCR9-205ENST00000463197 CNBD1Q8NA66 436 aa7.57□□□□□ -1.2
CCR9-205ENST00000463197 RTF1Q92541 710 aaKnown RBP7.57□□□□□ -1.2
CCR9-205ENST00000463197 MASTLQ96GX5 879 aa7.57□□□□□ -1.2
CCR9-205ENST00000463197 NIP7Q9Y221 180 aaKnown RBP eCLIP7.57□□□□□ -1.2
CCR9-205ENST00000463197 UBN2Q6ZU65 1347 aa7.56□□□□□ -1.2
CCR9-205ENST00000463197 SBF1O95248 1867 aa7.56□□□□□ -1.2
CCR9-205ENST00000463197 COL11A2P13942 1736 aaPredicted RBP7.56□□□□□ -1.2
CCR9-205ENST00000463197 SNED1Q8TER0 1413 aa7.56□□□□□ -1.2
CCR9-205ENST00000463197 ANXA1P04083 346 aa7.56□□□□□ -1.2
CCR9-205ENST00000463197 NFE2L2Q16236 605 aa7.56□□□□□ -1.2
CCR9-205ENST00000463197 KRT24Q2M2I5 525 aa7.56□□□□□ -1.2
CCR9-205ENST00000463197 ERFEQ4G0M1 354 aa7.56□□□□□ -1.2
CCR9-205ENST00000463197 SUSD4Q5VX71 490 aa7.56□□□□□ -1.2
CCR9-205ENST00000463197 NBPF5PQ86XG9 351 aaPredicted RBP7.56□□□□□ -1.2
CCR9-205ENST00000463197 NUTM1Q86Y26 1132 aa7.56□□□□□ -1.2
CCR9-205ENST00000463197 KLRG1Q96E93 195 aa7.56□□□□□ -1.2
CCR9-205ENST00000463197 RRP7AQ9Y3A4 280 aaKnown RBP7.56□□□□□ -1.2
CCR9-205ENST00000463197 SCN7AQ01118 1682 aa7.55□□□□□ -1.2
CCR9-205ENST00000463197 MYL6BP14649 208 aa7.55□□□□□ -1.2
CCR9-205ENST00000463197 COL13A1Q5TAT6 717 aaPredicted RBP7.55□□□□□ -1.2
CCR9-205ENST00000463197 ZNF34Q8IZ26 560 aa7.55□□□□□ -1.2
CCR9-205ENST00000463197 SYNE4Q8N205 404 aa7.55□□□□□ -1.2
CCR9-205ENST00000463197 CNKSR1Q969H4 720 aa7.55□□□□□ -1.2
CCR9-205ENST00000463197 ABCC12Q96J65 1359 aa7.55□□□□□ -1.2
CCR9-205ENST00000463197 SLX4Q8IY92 1834 aa7.55□□□□□ -1.2
CCR9-205ENST00000463197 LTBP3Q9NS15 1303 aa7.54□□□□□ -1.2
CCR9-205ENST00000463197 ZC3H4Q9UPT8 1303 aaKnown RBP7.54□□□□□ -1.2
CCR9-205ENST00000463197 COL4A5P29400 1685 aa7.54□□□□□ -1.2
CCR9-205ENST00000463197 DLEC1Q9Y238 1755 aa7.54□□□□□ -1.2
CCR9-205ENST00000463197 NPR1P16066 1061 aa7.54□□□□□ -1.2
CCR9-205ENST00000463197 GPTP24298 496 aa7.54□□□□□ -1.2
CCR9-205ENST00000463197 ST5P78524 1137 aa7.54□□□□□ -1.2
CCR9-205ENST00000463197 DDX10Q13206 875 aaKnown RBP7.54□□□□□ -1.2
CCR9-205ENST00000463197 CRY2Q49AN0 593 aa7.54□□□□□ -1.2
CCR9-205ENST00000463197 TPTE2Q6XPS3 522 aa7.54□□□□□ -1.2
CCR9-205ENST00000463197 C16orf71Q8IYS4 520 aaPredicted RBP7.54□□□□□ -1.2
CCR9-205ENST00000463197 SMC1BQ8NDV3 1235 aa7.54□□□□□ -1.2
CCR9-205ENST00000463197 ZNF428Q96B54 188 aa7.54□□□□□ -1.2
CCR9-205ENST00000463197 TAOK3Q9H2K8 898 aa7.54□□□□□ -1.2
CCR9-205ENST00000463197 ZBTB3Q9H5J0 574 aa7.54□□□□□ -1.2
CCR9-205ENST00000463197 ZNF277Q9NRM2 450 aaPredicted RBP7.54□□□□□ -1.2
CCR9-205ENST00000463197 TRIM35Q9UPQ4 493 aa7.54□□□□□ -1.2
CCR9-205ENST00000463197 PDZRN3Q9UPQ7 1066 aa7.54□□□□□ -1.2
CCR9-205ENST00000463197 MAP3K15Q6ZN16 1313 aa7.53□□□□□ -1.2
CCR9-205ENST00000463197 ZNF541Q9H0D2 1346 aa7.53□□□□□ -1.2
CCR9-205ENST00000463197 ERVV-1B6SEH8 477 aa7.53□□□□□ -1.2
CCR9-205ENST00000463197 RGL2O15211 777 aa7.53□□□□□ -1.2
CCR9-205ENST00000463197 NTSR2O95665 410 aa7.53□□□□□ -1.2
CCR9-205ENST00000463197 ZEB1P37275 1124 aaPredicted RBP7.53□□□□□ -1.2
CCR9-205ENST00000463197 TMPOP42166 694 aaKnown RBP7.53□□□□□ -1.2
CCR9-205ENST00000463197 RIPK4P57078 832 aa7.53□□□□□ -1.2
CCR9-205ENST00000463197 CCDC146Q8IYE0 955 aa7.53□□□□□ -1.2
CCR9-205ENST00000463197 BCORQ6W2J9 1755 aa7.52□□□□□ -1.21
CCR9-205ENST00000463197 FZD9O00144 591 aa7.52□□□□□ -1.21
CCR9-205ENST00000463197 ITGBL1O95965 494 aaPredicted RBP7.52□□□□□ -1.21
CCR9-205ENST00000463197 EIF2S2P20042 333 aaKnown RBP7.52□□□□□ -1.21
CCR9-205ENST00000463197 HOXA10P31260 410 aaPredicted RBP7.52□□□□□ -1.21
CCR9-205ENST00000463197 FKBP4Q02790 459 aaKnown RBP eCLIP7.52□□□□□ -1.21
CCR9-205ENST00000463197 FMR1Q06787 632 aaKnown RBP eCLIP7.52□□□□□ -1.21
CCR9-205ENST00000463197 DPY19L2Q6NUT2 758 aa7.52□□□□□ -1.21
CCR9-205ENST00000463197 PNISRQ8TF01 805 aaKnown RBP7.52□□□□□ -1.21
CCR9-205ENST00000463197 NECTIN2Q92692 538 aa7.52□□□□□ -1.21
CCR9-205ENST00000463197 TAF1DQ9H5J8 278 aaPredicted RBP7.52□□□□□ -1.21
CCR9-205ENST00000463197 ADAMTS8Q9UP79 889 aa7.52□□□□□ -1.21
CCR9-205ENST00000463197 PASKQ96RG2 1323 aa7.52□□□□□ -1.21
CCR9-205ENST00000463197 TNRC6CQ9HCJ0 1690 aaKnown RBP7.51□□□□□ -1.21
CCR9-205ENST00000463197 CHL1O00533 1208 aa7.51□□□□□ -1.21
CCR9-205ENST00000463197 TCERG1O14776 1098 aaKnown RBP7.51□□□□□ -1.21
CCR9-205ENST00000463197 CCDC93Q567U6 631 aa7.51□□□□□ -1.21
CCR9-205ENST00000463197 SLC10A5Q5PT55 438 aa7.51□□□□□ -1.21
CCR9-205ENST00000463197 GIGYF2Q6Y7W6 1299 aaKnown RBP7.51□□□□□ -1.21
CCR9-205ENST00000463197 COPS6Q7L5N1 327 aa7.51□□□□□ -1.21
CCR9-205ENST00000463197 L3MBTL3Q96JM7 780 aaPredicted RBP7.51□□□□□ -1.21
CCR9-205ENST00000463197 TSPYL4Q9UJ04 414 aa7.51□□□□□ -1.21
CCR9-205ENST00000463197 ZNF652Q9Y2D9 606 aa7.51□□□□□ -1.21
CCR9-205ENST00000463197 WDR90Q96KV7 1748 aa7.51□□□□□ -1.21
CCR9-205ENST00000463197 FER1L6Q2WGJ9 1857 aa7.51□□□□□ -1.21
CCR9-205ENST00000463197 NPHP1O15259 732 aa7.5□□□□□ -1.21
CCR9-205ENST00000463197 IARSP41252 1262 aaKnown RBP7.5□□□□□ -1.21
CCR9-205ENST00000463197 NEUROD2Q15784 382 aa7.5□□□□□ -1.21
CCR9-205ENST00000463197 CCDC184Q52MB2 194 aa7.5□□□□□ -1.21
CCR9-205ENST00000463197 CHADLQ6NUI6 762 aa7.5□□□□□ -1.21
CCR9-205ENST00000463197 NPM2Q86SE8 214 aaKnown RBP7.5□□□□□ -1.21
CCR9-205ENST00000463197 KDM3BQ7LBC6 1761 aa7.5□□□□□ -1.21
CCR9-205ENST00000463197 HCLS1P14317 486 aaPredicted RBP7.49□□□□□ -1.21
CCR9-205ENST00000463197 ALDH1B1P30837 517 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms