RNA–Protein interactions for RNA: ENST00000462944.1

MDH1-209, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-209ENST00000462944 STYK1Q6J9G0 422 aa12.34□□□□□ -0.43
MDH1-209ENST00000462944 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
MDH1-209ENST00000462944 NPM2Q86SE8 214 aaKnown RBP12.34□□□□□ -0.43
MDH1-209ENST00000462944 L3MBTL3Q96JM7 780 aaPredicted RBP12.34□□□□□ -0.43
MDH1-209ENST00000462944 TTC5Q8N0Z6 440 aa12.33□□□□□ -0.44
MDH1-209ENST00000462944 ZNF622Q969S3 477 aaKnown RBP eCLIP12.33□□□□□ -0.44
MDH1-209ENST00000462944 PANK3Q9H999 370 aa12.33□□□□□ -0.44
MDH1-209ENST00000462944 PASKQ96RG2 1323 aa12.33□□□□□ -0.44
MDH1-209ENST00000462944 TMEM88BA6NKF7 163 aa12.32□□□□□ -0.44
MDH1-209ENST00000462944 FOXN1O15353 648 aa12.32□□□□□ -0.44
MDH1-209ENST00000462944 C21orf2O43822 256 aa12.32□□□□□ -0.44
MDH1-209ENST00000462944 CENPBP07199 599 aaPredicted RBP12.32□□□□□ -0.44
MDH1-209ENST00000462944 IL6STP40189 918 aaPredicted RBP12.32□□□□□ -0.44
MDH1-209ENST00000462944 ST5P78524 1137 aa12.32□□□□□ -0.44
MDH1-209ENST00000462944 MKRN1Q9UHC7 482 aaKnown RBP12.32□□□□□ -0.44
MDH1-209ENST00000462944 NPHP1O15259 732 aa12.31□□□□□ -0.44
MDH1-209ENST00000462944 SLC34A2O95436 690 aa12.31□□□□□ -0.44
MDH1-209ENST00000462944 DDX10Q13206 875 aaKnown RBP12.31□□□□□ -0.44
MDH1-209ENST00000462944 SLC39A6Q13433 755 aa12.31□□□□□ -0.44
MDH1-209ENST00000462944 MASTLQ96GX5 879 aa12.31□□□□□ -0.44
MDH1-209ENST00000462944 POLR3GLQ9BT43 218 aa12.31□□□□□ -0.44
MDH1-209ENST00000462944 LGR6Q9HBX8 967 aa12.31□□□□□ -0.44
MDH1-209ENST00000462944 KNSTRNQ9Y448 316 aa12.31□□□□□ -0.44
MDH1-209ENST00000462944 THSD7BQ9C0I4 1608 aa12.3□□□□□ -0.44
MDH1-209ENST00000462944 RGL2O15211 777 aa12.3□□□□□ -0.44
MDH1-209ENST00000462944 CANXP27824 592 aaKnown RBP12.3□□□□□ -0.44
MDH1-209ENST00000462944 MAP2K1Q02750 393 aaPredicted RBP12.3□□□□□ -0.44
MDH1-209ENST00000462944 TBC1D9BQ66K14 1250 aa12.3□□□□□ -0.44
MDH1-209ENST00000462944 PRR5LQ6MZQ0 368 aa12.3□□□□□ -0.44
MDH1-209ENST00000462944 PNMA8AQ86V59 439 aaPredicted RBP12.3□□□□□ -0.44
MDH1-209ENST00000462944 CNBD1Q8NA66 436 aa12.3□□□□□ -0.44
MDH1-209ENST00000462944 SETDB2Q96T68 719 aa12.3□□□□□ -0.44
MDH1-209ENST00000462944 HEG1Q9ULI3 1381 aa12.3□□□□□ -0.44
MDH1-209ENST00000462944 CCER2I3L3R5 266 aa12.29□□□□□ -0.44
MDH1-209ENST00000462944 DDNO94850 711 aaPredicted RBP12.29□□□□□ -0.44
MDH1-209ENST00000462944 SRGNP10124 158 aa12.29□□□□□ -0.44
MDH1-209ENST00000462944 CCDC93Q567U6 631 aa12.29□□□□□ -0.44
MDH1-209ENST00000462944 BICDL1Q6ZP65 573 aa12.29□□□□□ -0.44
MDH1-209ENST00000462944 TAF1DQ9H5J8 278 aaPredicted RBP12.29□□□□□ -0.44
MDH1-209ENST00000462944 WBP1LQ9NX94 342 aa12.29□□□□□ -0.44
MDH1-209ENST00000462944 RASSF10A6NK89 507 aa12.28□□□□□ -0.44
MDH1-209ENST00000462944 PRPF40BQ6NWY9 871 aaKnown RBP12.28□□□□□ -0.44
MDH1-209ENST00000462944 CLEC4GQ6UXB4 293 aa12.28□□□□□ -0.44
MDH1-209ENST00000462944 PCDH10Q9P2E7 1040 aa12.28□□□□□ -0.44
MDH1-209ENST00000462944 HACL1Q9UJ83 578 aa12.28□□□□□ -0.44
MDH1-209ENST00000462944 ITGBL1O95965 494 aaPredicted RBP12.27□□□□□ -0.45
MDH1-209ENST00000462944 VEGFBP49765 207 aa12.27□□□□□ -0.45
MDH1-209ENST00000462944 TEFQ10587 303 aa12.27□□□□□ -0.45
MDH1-209ENST00000462944 ZNF790Q6PG37 636 aa12.27□□□□□ -0.45
MDH1-209ENST00000462944 RTKN2Q8IZC4 609 aa12.27□□□□□ -0.45
MDH1-209ENST00000462944 ZNF652Q9Y2D9 606 aa12.27□□□□□ -0.45
MDH1-209ENST00000462944 NUP98P52948 1817 aa12.26□□□□□ -0.45
MDH1-209ENST00000462944 NPR1P16066 1061 aa12.26□□□□□ -0.45
MDH1-209ENST00000462944 FKBP4Q02790 459 aaKnown RBP eCLIP12.26□□□□□ -0.45
MDH1-209ENST00000462944 MTHFSDQ2M296 383 aaKnown RBP12.26□□□□□ -0.45
MDH1-209ENST00000462944 DEFB115Q30KQ5 88 aa12.26□□□□□ -0.45
MDH1-209ENST00000462944 GAS2L2Q8NHY3 880 aa12.26□□□□□ -0.45
MDH1-209ENST00000462944 FMNL2Q96PY5 1086 aa12.26□□□□□ -0.45
MDH1-209ENST00000462944 DIAPH1O60610 1272 aaKnown RBP12.25□□□□□ -0.45
MDH1-209ENST00000462944 POTEIP0CG38 1075 aa12.25□□□□□ -0.45
MDH1-209ENST00000462944 POTEJP0CG39 1038 aa12.25□□□□□ -0.45
MDH1-209ENST00000462944 LBX1P52954 281 aa12.25□□□□□ -0.45
MDH1-209ENST00000462944 GRIPAP1Q4V328 841 aa12.25□□□□□ -0.45
MDH1-209ENST00000462944 LAMB4A4D0S4 1761 aa12.25□□□□□ -0.45
MDH1-209ENST00000462944 KLRG2A4D1S0 409 aaPredicted RBP12.24□□□□□ -0.45
MDH1-209ENST00000462944 GNAT3A8MTJ3 354 aa12.24□□□□□ -0.45
MDH1-209ENST00000462944 CAMTA2O94983 1202 aa12.24□□□□□ -0.45
MDH1-209ENST00000462944 HMOX1P09601 288 aa12.24□□□□□ -0.45
MDH1-209ENST00000462944 ALDH1B1P30837 517 aa12.24□□□□□ -0.45
MDH1-209ENST00000462944 EPHX2P34913 555 aa12.24□□□□□ -0.45
MDH1-209ENST00000462944 ECE1P42892 770 aa12.24□□□□□ -0.45
MDH1-209ENST00000462944 KIF7Q2M1P5 1343 aa12.24□□□□□ -0.45
MDH1-209ENST00000462944 GPC2Q8N158 579 aa12.24□□□□□ -0.45
MDH1-209ENST00000462944 C7orf43Q8WVR3 580 aa12.24□□□□□ -0.45
MDH1-209ENST00000462944 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
MDH1-209ENST00000462944 BEGAINQ9BUH8 593 aa12.24□□□□□ -0.45
MDH1-209ENST00000462944 TBC1D2BQ9UPU7 963 aa12.24□□□□□ -0.45
MDH1-209ENST00000462944 WDR33Q9C0J8 1336 aaKnown RBP12.23□□□□□ -0.45
MDH1-209ENST00000462944 FZD9O00144 591 aa12.23□□□□□ -0.45
MDH1-209ENST00000462944 HSPA8P11142 646 aaKnown RBP12.23□□□□□ -0.45
MDH1-209ENST00000462944 EAPPQ56P03 285 aaPredicted RBP12.23□□□□□ -0.45
MDH1-209ENST00000462944 CC2D2BQ6DHV5 1058 aa12.23□□□□□ -0.45
MDH1-209ENST00000462944 TPTE2Q6XPS3 522 aa12.23□□□□□ -0.45
MDH1-209ENST00000462944 NBPF5PQ86XG9 351 aaPredicted RBP12.23□□□□□ -0.45
MDH1-209ENST00000462944 DZIP3Q86Y13 1208 aaKnown RBP12.23□□□□□ -0.45
MDH1-209ENST00000462944 CNTROBQ8N137 903 aa12.23□□□□□ -0.45
MDH1-209ENST00000462944 ABHD8Q96I13 439 aa12.23□□□□□ -0.45
MDH1-209ENST00000462944 CLEC11AQ9Y240 323 aa12.23□□□□□ -0.45
MDH1-209ENST00000462944 ZNF330Q9Y3S2 320 aaPredicted RBP12.23□□□□□ -0.45
MDH1-209ENST00000462944 CEMIPQ8WUJ3 1361 aa12.22□□□□□ -0.45
MDH1-209ENST00000462944 RGS19P49795 217 aa12.22□□□□□ -0.45
MDH1-209ENST00000462944 AMER1Q5JTC6 1135 aaPredicted RBP12.22□□□□□ -0.45
MDH1-209ENST00000462944 PSMD1Q99460 953 aa12.22□□□□□ -0.45
MDH1-209ENST00000462944 ANP32CO43423 234 aa12.21□□□□□ -0.45
MDH1-209ENST00000462944 IARSP41252 1262 aaKnown RBP12.21□□□□□ -0.45
MDH1-209ENST00000462944 JDP2Q8WYK2 163 aa12.21□□□□□ -0.45
MDH1-209ENST00000462944 CASP8AP2Q9UKL3 1982 aa12.21□□□□□ -0.46
MDH1-209ENST00000462944 AKAP11Q9UKA4 1901 aa12.2□□□□□ -0.46
MDH1-209ENST00000462944 CA12O43570 354 aa12.2□□□□□ -0.46
MDH1-209ENST00000462944 ATXN8OSP0DMR3 200 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms