RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 NOLC1Q14978 699 aaKnown RBP eCLIP4.2□□□□□ -1.74
COL8A1-204ENST00000462604 ANKRD1Q15327 319 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 MAP3K11Q16584 847 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 VPS53Q5VIR6 699 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 RUFY3Q7L099 469 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 PPP1R42Q7Z4L9 355 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 SMAP1Q8IYB5 467 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-204ENST00000462604 CLASRPQ8N2M8 674 aaKnown RBP4.2□□□□□ -1.74
COL8A1-204ENST00000462604 SPOCK2Q92563 424 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 JAKMIP1Q96N16 626 aaKnown RBP4.2□□□□□ -1.74
COL8A1-204ENST00000462604 CCDC94Q9BW85 323 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-204ENST00000462604 TM6SF1Q9BZW5 370 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 USP44Q9H0E7 712 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 SPTLC3Q9NUV7 552 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 SETD1AO15047 1707 aaKnown RBP4.2□□□□□ -1.74
COL8A1-204ENST00000462604 ANKARQ7Z5J8 1434 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 CEP170BQ9Y4F5 1589 aaPredicted RBP4.19□□□□□ -1.74
COL8A1-204ENST00000462604 VPS37CA5D8V6 355 aaPredicted RBP4.19□□□□□ -1.74
COL8A1-204ENST00000462604 GOLGA6L4A6NEF3 574 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 ALDH1L1O75891 902 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 HCLS1P14317 486 aaPredicted RBP4.19□□□□□ -1.74
COL8A1-204ENST00000462604 GJB2P29033 226 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 HOXC9P31274 260 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 GTF2F1P35269 517 aaKnown RBP eCLIP4.19□□□□□ -1.74
COL8A1-204ENST00000462604 NLRP6P59044 892 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 KRT85P78386 507 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 RNF20Q5VTR2 975 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 PRPF40BQ6NWY9 871 aaKnown RBP4.19□□□□□ -1.74
COL8A1-204ENST00000462604 CWC27Q6UX04 472 aaKnown RBP4.19□□□□□ -1.74
COL8A1-204ENST00000462604 CCDC83Q8IWF9 413 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 DNAAF4Q8WXU2 420 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 KCNB2Q92953 911 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 EVI5LQ96CN4 794 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 NUP62CLQ9H1M0 184 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 TTC12Q9H892 705 aaPredicted RBP4.19□□□□□ -1.74
COL8A1-204ENST00000462604 ECHDC1Q9NTX5 307 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 DDX19AQ9NUU7 478 aaKnown RBP4.19□□□□□ -1.74
COL8A1-204ENST00000462604 HYPKQ9NX55 129 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 MTMR6Q9Y217 621 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 KIF3AQ9Y496 699 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 LRRC37A3O60309 1634 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 TOPAZ1Q8N9V7 1692 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 CCDC171Q6TFL3 1326 aa4.19□□□□□ -1.74
COL8A1-204ENST00000462604 RGPD1P0DJD0 1748 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 PEAK1Q9H792 1746 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 GTPBP6O43824 516 aaPredicted RBP4.18□□□□□ -1.74
COL8A1-204ENST00000462604 EIF2S2P20042 333 aaKnown RBP4.18□□□□□ -1.74
COL8A1-204ENST00000462604 DNM1Q05193 864 aaKnown RBP4.18□□□□□ -1.74
COL8A1-204ENST00000462604 TYRO3Q06418 890 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 TEFQ10587 303 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 MKRN4PQ13434 485 aaPredicted RBP4.18□□□□□ -1.74
COL8A1-204ENST00000462604 MTX1Q13505 466 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 KRT32Q14532 448 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 NKX1-1Q15270 411 aaPredicted RBP4.18□□□□□ -1.74
COL8A1-204ENST00000462604 BEND3Q5T5X7 828 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 CYB5RLQ6IPT4 315 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 LMOD2Q6P5Q4 547 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 GIMAP6Q6P9H5 292 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.18□□□□□ -1.74
COL8A1-204ENST00000462604 RASEFQ8IZ41 740 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 IL17REQ8NFR9 667 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 FAM200AQ8TCP9 573 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 ZNF830Q96NB3 372 aaPredicted RBP4.18□□□□□ -1.74
COL8A1-204ENST00000462604 FUCA2Q9BTY2 467 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 SCAND2PQ9GZW5 306 aaPredicted RBP4.18□□□□□ -1.74
COL8A1-204ENST00000462604 IL25Q9H293 177 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 PHAXQ9H814 394 aaKnown RBP4.18□□□□□ -1.74
COL8A1-204ENST00000462604 ZSWIM6Q9HCJ5 1215 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 C9orf78Q9NZ63 289 aaPredicted RBP4.18□□□□□ -1.74
COL8A1-204ENST00000462604 HMG20BQ9P0W2 317 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 CHPF2Q9P2E5 772 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 SPG7Q9UQ90 795 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 AMOTL2Q9Y2J4 779 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 TBX22Q9Y458 520 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 RBM8AQ9Y5S9 174 aaKnown RBP4.18□□□□□ -1.74
COL8A1-204ENST00000462604 ADGRL3Q9HAR2 1447 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 DIP2BQ9P265 1576 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 ELP1O95163 1332 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 ITSN1Q15811 1721 aa4.18□□□□□ -1.74
COL8A1-204ENST00000462604 AKAP12Q02952 1782 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 CEMIPQ8WUJ3 1361 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 ZBTB7CA1YPR0 619 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 PI4KAP2A4QPH2 592 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 SLC27A2O14975 620 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 LARGE1O95461 756 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 DDX58O95786 925 aaKnown RBP4.17□□□□□ -1.74
COL8A1-204ENST00000462604 CAVIN2O95810 425 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 CPA1P15085 419 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 LTKP29376 864 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 EIF4A1P60842 406 aaKnown RBP4.17□□□□□ -1.74
COL8A1-204ENST00000462604 G3BP1Q13283 466 aaKnown RBP eCLIP4.17□□□□□ -1.74
COL8A1-204ENST00000462604 PLEKHO1Q53GL0 409 aaPredicted RBP4.17□□□□□ -1.74
COL8A1-204ENST00000462604 AKAP4Q5JQC9 854 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 C1orf141Q5JVX7 400 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 UTP14CQ5TAP6 766 aaKnown RBP4.17□□□□□ -1.74
COL8A1-204ENST00000462604 LARP1BQ659C4 914 aaKnown RBP4.17□□□□□ -1.74
COL8A1-204ENST00000462604 CREB3L3Q68CJ9 461 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 ZNF530Q6P9A1 599 aaPredicted RBP4.17□□□□□ -1.74
COL8A1-204ENST00000462604 BLOC1S2Q6QNY1 142 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 AACSQ86V21 672 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms