RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 CAMTA2O94983 1202 aa15.77■□□□□ 0.12
PCCB-203ENST00000462542 HSPA5P11021 654 aaKnown RBP15.77■□□□□ 0.12
PCCB-203ENST00000462542 DEFB115Q30KQ5 88 aa15.77■□□□□ 0.12
PCCB-203ENST00000462542 CCDC93Q567U6 631 aa15.77■□□□□ 0.12
PCCB-203ENST00000462542 CLEC4GQ6UXB4 293 aa15.77■□□□□ 0.12
PCCB-203ENST00000462542 C7orf43Q8WVR3 580 aa15.77■□□□□ 0.12
PCCB-203ENST00000462542 HACL1Q9UJ83 578 aa15.77■□□□□ 0.12
PCCB-203ENST00000462542 CLEC11AQ9Y240 323 aa15.77■□□□□ 0.12
PCCB-203ENST00000462542 ZNF330Q9Y3S2 320 aaPredicted RBP15.77■□□□□ 0.12
PCCB-203ENST00000462542 UBR2Q8IWV8 1755 aa15.77■□□□□ 0.11
PCCB-203ENST00000462542 SLX4Q8IY92 1834 aa15.76■□□□□ 0.11
PCCB-203ENST00000462542 GNAT3A8MTJ3 354 aa15.76■□□□□ 0.11
PCCB-203ENST00000462542 MAP2K1Q02750 393 aaPredicted RBP15.76■□□□□ 0.11
PCCB-203ENST00000462542 AMER1Q5JTC6 1135 aaPredicted RBP15.76■□□□□ 0.11
PCCB-203ENST00000462542 RTKN2Q8IZC4 609 aa15.76■□□□□ 0.11
PCCB-203ENST00000462542 FMNL2Q96PY5 1086 aa15.76■□□□□ 0.11
PCCB-203ENST00000462542 CLSPNQ9HAW4 1339 aa15.75■□□□□ 0.11
PCCB-203ENST00000462542 A1BGP04217 495 aa15.75■□□□□ 0.11
PCCB-203ENST00000462542 NPR1P16066 1061 aa15.75■□□□□ 0.11
PCCB-203ENST00000462542 LBX1P52954 281 aa15.75■□□□□ 0.11
PCCB-203ENST00000462542 FKBP4Q02790 459 aaKnown RBP eCLIP15.75■□□□□ 0.11
PCCB-203ENST00000462542 EAPPQ56P03 285 aaPredicted RBP15.75■□□□□ 0.11
PCCB-203ENST00000462542 IL17REQ8NFR9 667 aa15.75■□□□□ 0.11
PCCB-203ENST00000462542 KLRG2A4D1S0 409 aaPredicted RBP15.74■□□□□ 0.11
PCCB-203ENST00000462542 RASSF10A6NK89 507 aa15.74■□□□□ 0.11
PCCB-203ENST00000462542 DZIP3Q86Y13 1208 aaKnown RBP15.74■□□□□ 0.11
PCCB-203ENST00000462542 CNTROBQ8N137 903 aa15.74■□□□□ 0.11
PCCB-203ENST00000462542 GAS2L2Q8NHY3 880 aa15.74■□□□□ 0.11
PCCB-203ENST00000462542 SLC34A2O95436 690 aa15.73■□□□□ 0.11
PCCB-203ENST00000462542 EPHX2P34913 555 aa15.73■□□□□ 0.11
PCCB-203ENST00000462542 TRIM26Q12899 539 aaPredicted RBP15.73■□□□□ 0.11
PCCB-203ENST00000462542 TPTE2Q6XPS3 522 aa15.73■□□□□ 0.11
PCCB-203ENST00000462542 NBPF5PQ86XG9 351 aaPredicted RBP15.73■□□□□ 0.11
PCCB-203ENST00000462542 ZNF652Q9Y2D9 606 aa15.73■□□□□ 0.11
PCCB-203ENST00000462542 COL11A2P13942 1736 aaPredicted RBP15.73■□□□□ 0.11
PCCB-203ENST00000462542 ALDH1B1P30837 517 aa15.72■□□□□ 0.11
PCCB-203ENST00000462542 ABHD8Q96I13 439 aa15.72■□□□□ 0.11
PCCB-203ENST00000462542 SCN7AQ01118 1682 aa15.72■□□□□ 0.11
PCCB-203ENST00000462542 WDR33Q9C0J8 1336 aaKnown RBP15.71■□□□□ 0.11
PCCB-203ENST00000462542 FZD9O00144 591 aa15.71■□□□□ 0.11
PCCB-203ENST00000462542 RGL2O15211 777 aa15.71■□□□□ 0.11
PCCB-203ENST00000462542 GPC2Q8N158 579 aa15.71■□□□□ 0.11
PCCB-203ENST00000462542 ZNF277Q9NRM2 450 aaPredicted RBP15.71■□□□□ 0.11
PCCB-203ENST00000462542 ARFGEF2Q9Y6D5 1785 aa15.71■□□□□ 0.11
PCCB-203ENST00000462542 HSPA8P11142 646 aaKnown RBP15.7■□□□□ 0.1
PCCB-203ENST00000462542 ZNF541Q9H0D2 1346 aa15.69■□□□□ 0.1
PCCB-203ENST00000462542 BTBD11A6QL63 1104 aa15.69■□□□□ 0.1
PCCB-203ENST00000462542 IARSP41252 1262 aaKnown RBP15.69■□□□□ 0.1
PCCB-203ENST00000462542 MAP1SQ66K74 1059 aaPredicted RBP15.69■□□□□ 0.1
PCCB-203ENST00000462542 SYNE4Q8N205 404 aa15.69■□□□□ 0.1
PCCB-203ENST00000462542 JDP2Q8WYK2 163 aa15.69■□□□□ 0.1
PCCB-203ENST00000462542 ABT1Q9ULW3 272 aaKnown RBP15.69■□□□□ 0.1
PCCB-203ENST00000462542 USP16Q9Y5T5 823 aa15.69■□□□□ 0.1
PCCB-203ENST00000462542 CACNA1SQ13698 1873 aa15.68■□□□□ 0.1
PCCB-203ENST00000462542 BEGAINQ9BUH8 593 aa15.68■□□□□ 0.1
PCCB-203ENST00000462542 CEMIPQ8WUJ3 1361 aa15.67■□□□□ 0.1
PCCB-203ENST00000462542 U2SURPO15042 1029 aaKnown RBP15.67■□□□□ 0.1
PCCB-203ENST00000462542 SNRPA1P09661 255 aaKnown RBP15.67■□□□□ 0.1
PCCB-203ENST00000462542 ECE1P42892 770 aa15.67■□□□□ 0.1
PCCB-203ENST00000462542 GRIPAP1Q4V328 841 aa15.67■□□□□ 0.1
PCCB-203ENST00000462542 CC2D2BQ6DHV5 1058 aa15.67■□□□□ 0.1
PCCB-203ENST00000462542 PSMD1Q99460 953 aa15.67■□□□□ 0.1
PCCB-203ENST00000462542 DDX21Q9NR30 783 aaKnown RBP eCLIP15.67■□□□□ 0.1
PCCB-203ENST00000462542 NIP7Q9Y221 180 aaKnown RBP eCLIP15.67■□□□□ 0.1
PCCB-203ENST00000462542 RNF123Q5XPI4 1314 aa15.67■□□□□ 0.1
PCCB-203ENST00000462542 PER1O15534 1290 aaPredicted RBP15.66■□□□□ 0.1
PCCB-203ENST00000462542 KCNQ3O43525 872 aa15.66■□□□□ 0.1
PCCB-203ENST00000462542 RGS19P49795 217 aa15.66■□□□□ 0.1
PCCB-203ENST00000462542 EIF6P56537 245 aaKnown RBP15.66■□□□□ 0.1
PCCB-203ENST00000462542 MLLT1Q03111 559 aaPredicted RBP15.66■□□□□ 0.1
PCCB-203ENST00000462542 FAM161AQ3B820 660 aa15.66■□□□□ 0.1
PCCB-203ENST00000462542 SIPA1L3O60292 1781 aaPredicted RBP15.65■□□□□ 0.1
PCCB-203ENST00000462542 ADAMTSL1Q8N6G6 1762 aa15.65■□□□□ 0.1
PCCB-203ENST00000462542 GTF2E1P29083 439 aaPredicted RBP15.65■□□□□ 0.1
PCCB-203ENST00000462542 LMOD1P29536 600 aaPredicted RBP15.65■□□□□ 0.1
PCCB-203ENST00000462542 OLFM4Q6UX06 510 aa15.64■□□□□ 0.09
PCCB-203ENST00000462542 CAPNS2Q96L46 248 aa15.64■□□□□ 0.09
PCCB-203ENST00000462542 GPR101Q96P66 508 aaPredicted RBP15.64■□□□□ 0.09
PCCB-203ENST00000462542 BCORQ6W2J9 1755 aa15.64■□□□□ 0.09
PCCB-203ENST00000462542 MAP2K2P36507 400 aa15.63■□□□□ 0.09
PCCB-203ENST00000462542 CC2D1BQ5T0F9 858 aaKnown RBP15.63■□□□□ 0.09
PCCB-203ENST00000462542 USP50Q70EL3 339 aaPredicted RBP15.63■□□□□ 0.09
PCCB-203ENST00000462542 NYXQ9GZU5 481 aa15.63■□□□□ 0.09
PCCB-203ENST00000462542 PCDH10Q9P2E7 1040 aa15.63■□□□□ 0.09
PCCB-203ENST00000462542 GJA3Q9Y6H8 435 aa15.63■□□□□ 0.09
PCCB-203ENST00000462542 CCDC85CA6NKD9 419 aa15.62■□□□□ 0.09
PCCB-203ENST00000462542 PIP4K2AP48426 406 aaPredicted RBP15.62■□□□□ 0.09
PCCB-203ENST00000462542 FAM177BA6PVY3 158 aa15.61■□□□□ 0.09
PCCB-203ENST00000462542 CRY2Q49AN0 593 aa15.61■□□□□ 0.09
PCCB-203ENST00000462542 RTF1Q92541 710 aaKnown RBP15.61■□□□□ 0.09
PCCB-203ENST00000462542 PHACTR3Q96KR7 559 aa15.61■□□□□ 0.09
PCCB-203ENST00000462542 PRAMEF22A3QJZ6 481 aa15.6■□□□□ 0.09
PCCB-203ENST00000462542 NBPF26B4DH59 902 aa15.6■□□□□ 0.09
PCCB-203ENST00000462542 CA12O43570 354 aa15.6■□□□□ 0.09
PCCB-203ENST00000462542 HOXA10P31260 410 aaPredicted RBP15.6■□□□□ 0.09
PCCB-203ENST00000462542 NBPF10Q6P3W6 841 aaKnown RBP15.6■□□□□ 0.09
PCCB-203ENST00000462542 PAXIP1Q6ZW49 1069 aaPredicted RBP15.6■□□□□ 0.09
PCCB-203ENST00000462542 NBPF15Q8N660 670 aa15.6■□□□□ 0.09
PCCB-203ENST00000462542 PCGF6Q9BYE7 350 aa15.6■□□□□ 0.09
PCCB-203ENST00000462542 ERVV-1B6SEH8 477 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms