RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 CCNL1Q9UK58 526 aaPredicted RBP25.03■■□□□ 1.6
PTPN18-207ENST00000462321 CNTNAP4Q9C0A0 1308 aa25.03■■□□□ 1.6
PTPN18-207ENST00000462321 GNAI3P08754 354 aa25.03■■□□□ 1.6
PTPN18-207ENST00000462321 ZNF330Q9Y3S2 320 aaPredicted RBP25.03■■□□□ 1.6
PTPN18-207ENST00000462321 ARFGEF2Q9Y6D5 1785 aa25.02■■□□□ 1.6
PTPN18-207ENST00000462321 KDM2BQ8NHM5 1336 aa25.02■■□□□ 1.6
PTPN18-207ENST00000462321 KIF6Q6ZMV9 814 aa25.02■■□□□ 1.6
PTPN18-207ENST00000462321 ILDR1Q86SU0 546 aaPredicted RBP25.01■■□□□ 1.59
PTPN18-207ENST00000462321 NUP188Q5SRE5 1749 aa25.01■■□□□ 1.59
PTPN18-207ENST00000462321 EIF5P55010 431 aaKnown RBP25■■□□□ 1.59
PTPN18-207ENST00000462321 CENPQQ7L2Z9 268 aaPredicted RBP25■■□□□ 1.59
PTPN18-207ENST00000462321 NPM2Q86SE8 214 aaKnown RBP25■■□□□ 1.59
PTPN18-207ENST00000462321 MYD88Q99836 296 aa25■■□□□ 1.59
PTPN18-207ENST00000462321 USP44Q9H0E7 712 aa25■■□□□ 1.59
PTPN18-207ENST00000462321 C1orf115Q9H7X2 142 aa25■■□□□ 1.59
PTPN18-207ENST00000462321 EP400Q96L91 3159 aa25■■□□□ 1.59
PTPN18-207ENST00000462321 IGKV5-2P06315 115 aa25■■□□□ 1.59
PTPN18-207ENST00000462321 RC3H1Q5TC82 1133 aaKnown RBP24.99■■□□□ 1.59
PTPN18-207ENST00000462321 ZBTB3Q9H5J0 574 aa24.99■■□□□ 1.59
PTPN18-207ENST00000462321 MAP3K15Q6ZN16 1313 aa24.99■■□□□ 1.59
PTPN18-207ENST00000462321 NEURL1BA8MQ27 555 aa24.98■■□□□ 1.59
PTPN18-207ENST00000462321 KCNQ4P56696 695 aa24.98■■□□□ 1.59
PTPN18-207ENST00000462321 HDAC1Q13547 482 aaPredicted RBP24.98■■□□□ 1.59
PTPN18-207ENST00000462321 CWF19L2Q2TBE0 894 aaKnown RBP24.98■■□□□ 1.59
PTPN18-207ENST00000462321 RWDD1Q9H446 243 aaPredicted RBP24.98■■□□□ 1.59
PTPN18-207ENST00000462321 IGHDP01880 384 aa24.97■■□□□ 1.59
PTPN18-207ENST00000462321 GNAI2P04899 355 aa24.97■■□□□ 1.59
PTPN18-207ENST00000462321 UBTFL1P0CB47 393 aaPredicted RBP24.97■■□□□ 1.59
PTPN18-207ENST00000462321 SLC27A3Q5K4L6 730 aa24.97■■□□□ 1.59
PTPN18-207ENST00000462321 MYH14Q7Z406 1995 aaKnown RBP24.96■■□□□ 1.59
PTPN18-207ENST00000462321 DZIP3Q86Y13 1208 aaKnown RBP24.95■■□□□ 1.59
PTPN18-207ENST00000462321 COL15A1P39059 1388 aa24.95■■□□□ 1.58
PTPN18-207ENST00000462321 ERVV-1B6SEH8 477 aa24.95■■□□□ 1.58
PTPN18-207ENST00000462321 C9orf78Q9NZ63 289 aaPredicted RBP24.95■■□□□ 1.58
PTPN18-207ENST00000462321 UTYO14607 1347 aa24.94■■□□□ 1.58
PTPN18-207ENST00000462321 GCKRQ14397 625 aa24.94■■□□□ 1.58
PTPN18-207ENST00000462321 RPAP2Q8IXW5 612 aaPredicted RBP24.94■■□□□ 1.58
PTPN18-207ENST00000462321 GRM8O00222 908 aa24.93■■□□□ 1.58
PTPN18-207ENST00000462321 NBPF7P0C2Y1 421 aaPredicted RBP24.93■■□□□ 1.58
PTPN18-207ENST00000462321 CEP85Q6P2H3 762 aa24.93■■□□□ 1.58
PTPN18-207ENST00000462321 GIGYF2Q6Y7W6 1299 aaKnown RBP24.93■■□□□ 1.58
PTPN18-207ENST00000462321 ANKRD44Q8N8A2 993 aa24.93■■□□□ 1.58
PTPN18-207ENST00000462321 ARXQ96QS3 562 aa24.93■■□□□ 1.58
PTPN18-207ENST00000462321 TAF1LQ8IZX4 1826 aa24.93■■□□□ 1.58
PTPN18-207ENST00000462321 PLSCR1O15162 318 aa24.92■■□□□ 1.58
PTPN18-207ENST00000462321 HMGB2P26583 209 aaKnown RBP24.92■■□□□ 1.58
PTPN18-207ENST00000462321 TCIRG1Q13488 830 aa24.92■■□□□ 1.58
PTPN18-207ENST00000462321 HSP90AB3PQ58FF7 597 aa24.92■■□□□ 1.58
PTPN18-207ENST00000462321 LRRC4BQ9NT99 713 aa24.92■■□□□ 1.58
PTPN18-207ENST00000462321 HDAC5Q9UQL6 1122 aa24.92■■□□□ 1.58
PTPN18-207ENST00000462321 C4BP0C0L5 1744 aa24.92■■□□□ 1.58
PTPN18-207ENST00000462321 A0A087WZG4 1122 aa24.92■■□□□ 1.58
PTPN18-207ENST00000462321 ATP5J2-PTCD1G3V325 749 aa24.92■■□□□ 1.58
PTPN18-207ENST00000462321 TBC1D2BQ9UPU7 963 aa24.92■■□□□ 1.58
PTPN18-207ENST00000462321 LRRFIP2Q9Y608 721 aaKnown RBP24.92■■□□□ 1.58
PTPN18-207ENST00000462321 RPS6KA4O75676 772 aa24.91■■□□□ 1.58
PTPN18-207ENST00000462321 SIRT2Q8IXJ6 389 aa24.91■■□□□ 1.58
PTPN18-207ENST00000462321 ISCA1Q9BUE6 129 aa24.91■■□□□ 1.58
PTPN18-207ENST00000462321 APBA3O96018 575 aa24.9■■□□□ 1.58
PTPN18-207ENST00000462321 TRIM28Q13263 835 aaKnown RBP24.9■■□□□ 1.58
PTPN18-207ENST00000462321 CCDC191Q8NCU4 936 aa24.9■■□□□ 1.58
PTPN18-207ENST00000462321 TNS1Q9HBL0 1735 aaKnown RBP24.9■■□□□ 1.58
PTPN18-207ENST00000462321 CWC25Q9NXE8 425 aaPredicted RBP24.89■■□□□ 1.58
PTPN18-207ENST00000462321 GNPATO15228 680 aa24.89■■□□□ 1.57
PTPN18-207ENST00000462321 HLFQ16534 295 aa24.89■■□□□ 1.57
PTPN18-207ENST00000462321 TXNRD1Q16881 649 aa24.89■■□□□ 1.57
PTPN18-207ENST00000462321 CAMTA2O94983 1202 aa24.88■■□□□ 1.57
PTPN18-207ENST00000462321 AFDNP55196 1824 aaKnown RBP24.88■■□□□ 1.57
PTPN18-207ENST00000462321 RTCBQ9Y3I0 505 aaKnown RBP24.88■■□□□ 1.57
PTPN18-207ENST00000462321 AK7Q96M32 723 aa24.87■■□□□ 1.57
PTPN18-207ENST00000462321 HMMRO75330 724 aa24.86■■□□□ 1.57
PTPN18-207ENST00000462321 RGPD3A6NKT7 1758 aaPredicted RBP24.86■■□□□ 1.57
PTPN18-207ENST00000462321 RGPD4Q7Z3J3 1758 aa24.86■■□□□ 1.57
PTPN18-207ENST00000462321 RGL2O15211 777 aa24.86■■□□□ 1.57
PTPN18-207ENST00000462321 PROM2Q8N271 834 aa24.86■■□□□ 1.57
PTPN18-207ENST00000462321 SMC5Q8IY18 1101 aa24.85■■□□□ 1.57
PTPN18-207ENST00000462321 ATP8B2P98198 1209 aa24.84■■□□□ 1.57
PTPN18-207ENST00000462321 ANKRD36CQ5JPF3 1778 aa24.84■■□□□ 1.57
PTPN18-207ENST00000462321 BCORQ6W2J9 1755 aa24.84■■□□□ 1.57
PTPN18-207ENST00000462321 H7C1W4 665 aa24.83■■□□□ 1.57
PTPN18-207ENST00000462321 CASP7P55210 303 aa24.83■■□□□ 1.57
PTPN18-207ENST00000462321 GCC1Q96CN9 775 aa24.83■■□□□ 1.57
PTPN18-207ENST00000462321 SUCLG2Q96I99 432 aa24.83■■□□□ 1.57
PTPN18-207ENST00000462321 ZNF652Q9Y2D9 606 aa24.83■■□□□ 1.57
PTPN18-207ENST00000462321 UBE3BQ7Z3V4 1068 aa24.83■■□□□ 1.57
PTPN18-207ENST00000462321 SCN7AQ01118 1682 aa24.82■■□□□ 1.56
PTPN18-207ENST00000462321 ADRA2BP18089 450 aa24.82■■□□□ 1.56
PTPN18-207ENST00000462321 MTX1Q13505 466 aa24.82■■□□□ 1.56
PTPN18-207ENST00000462321 CLEC4GQ6UXB4 293 aa24.82■■□□□ 1.56
PTPN18-207ENST00000462321 NLRP10Q86W26 655 aa24.82■■□□□ 1.56
PTPN18-207ENST00000462321 ZNF34Q8IZ26 560 aa24.82■■□□□ 1.56
PTPN18-207ENST00000462321 KAZALD1Q96I82 304 aa24.81■■□□□ 1.56
PTPN18-207ENST00000462321 NARFQ9UHQ1 456 aa24.81■■□□□ 1.56
PTPN18-207ENST00000462321 NUP98P52948 1817 aa24.81■■□□□ 1.56
PTPN18-207ENST00000462321 PNMA6EA0A0J9YXQ4 647 aa24.81■■□□□ 1.56
PTPN18-207ENST00000462321 GPTP24298 496 aa24.81■■□□□ 1.56
PTPN18-207ENST00000462321 AMIGO3Q86WK7 504 aa24.81■■□□□ 1.56
PTPN18-207ENST00000462321 DCTPP1Q9H773 170 aa24.81■■□□□ 1.56
PTPN18-207ENST00000462321 PELP1Q8IZL8 1130 aaKnown RBP24.8■■□□□ 1.56
PTPN18-207ENST00000462321 PCCAP05165 728 aaPredicted RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms