RNA–Protein interactions for RNA: ENST00000462129.1

RER1-206, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-206ENST00000462129 C21orf2O43822 256 aa23.5■■□□□ 1.35
RER1-206ENST00000462129 STARD3NLO95772 234 aa23.5■■□□□ 1.35
RER1-206ENST00000462129 TTC5Q8N0Z6 440 aa23.5■■□□□ 1.35
RER1-206ENST00000462129 NGEFQ8N5V2 710 aa23.5■■□□□ 1.35
RER1-206ENST00000462129 ANKRD31Q8N7Z5 1873 aa23.49■■□□□ 1.35
RER1-206ENST00000462129 SCN7AQ01118 1682 aa23.49■■□□□ 1.35
RER1-206ENST00000462129 A0A087WZG4 1122 aa23.49■■□□□ 1.35
RER1-206ENST00000462129 ERFEQ4G0M1 354 aa23.49■■□□□ 1.35
RER1-206ENST00000462129 TBC1D9BQ66K14 1250 aa23.49■■□□□ 1.35
RER1-206ENST00000462129 COL11A2P13942 1736 aaPredicted RBP23.49■■□□□ 1.35
RER1-206ENST00000462129 EIF5P55010 431 aaKnown RBP23.48■■□□□ 1.35
RER1-206ENST00000462129 CALD1Q05682 793 aaKnown RBP23.48■■□□□ 1.35
RER1-206ENST00000462129 MCM10Q7L590 875 aa23.48■■□□□ 1.35
RER1-206ENST00000462129 CCDC24Q8N4L8 307 aa23.48■■□□□ 1.35
RER1-206ENST00000462129 ZNF330Q9Y3S2 320 aaPredicted RBP23.48■■□□□ 1.35
RER1-206ENST00000462129 PDE6BP35913 854 aa23.47■■□□□ 1.35
RER1-206ENST00000462129 PRR5LQ6MZQ0 368 aa23.46■■□□□ 1.35
RER1-206ENST00000462129 BRIP1Q9BX63 1249 aa23.46■■□□□ 1.35
RER1-206ENST00000462129 PDZRN3Q9UPQ7 1066 aa23.46■■□□□ 1.35
RER1-206ENST00000462129 DCTN1Q14203 1278 aa23.45■■□□□ 1.34
RER1-206ENST00000462129 IL17REQ8NFR9 667 aa23.45■■□□□ 1.34
RER1-206ENST00000462129 MKRN1Q9UHC7 482 aaKnown RBP23.45■■□□□ 1.34
RER1-206ENST00000462129 SALL2Q9Y467 1007 aaPredicted RBP23.45■■□□□ 1.34
RER1-206ENST00000462129 DICER1Q9UPY3 1922 aaKnown RBP23.45■■□□□ 1.34
RER1-206ENST00000462129 FER1L6Q2WGJ9 1857 aa23.45■■□□□ 1.34
RER1-206ENST00000462129 NCBP3Q53F19 620 aaKnown RBP23.44■■□□□ 1.34
RER1-206ENST00000462129 CHADLQ6NUI6 762 aa23.44■■□□□ 1.34
RER1-206ENST00000462129 TAOK3Q9H2K8 898 aa23.44■■□□□ 1.34
RER1-206ENST00000462129 TBC1D2BQ9UPU7 963 aa23.44■■□□□ 1.34
RER1-206ENST00000462129 CEMIPQ8WUJ3 1361 aa23.43■■□□□ 1.34
RER1-206ENST00000462129 NPHP1O15259 732 aa23.43■■□□□ 1.34
RER1-206ENST00000462129 ZNF496Q96IT1 587 aaPredicted RBP23.43■■□□□ 1.34
RER1-206ENST00000462129 CREBZFQ9NS37 354 aa23.43■■□□□ 1.34
RER1-206ENST00000462129 HEG1Q9ULI3 1381 aa23.42■■□□□ 1.34
RER1-206ENST00000462129 LTBP3Q9NS15 1303 aa23.42■■□□□ 1.34
RER1-206ENST00000462129 POTEIP0CG38 1075 aa23.42■■□□□ 1.34
RER1-206ENST00000462129 POTEJP0CG39 1038 aa23.42■■□□□ 1.34
RER1-206ENST00000462129 CCDC27Q2M243 656 aa23.42■■□□□ 1.34
RER1-206ENST00000462129 DDNO94850 711 aaPredicted RBP23.41■■□□□ 1.34
RER1-206ENST00000462129 CNBD1Q8NA66 436 aa23.41■■□□□ 1.34
RER1-206ENST00000462129 TAF7Q15545 349 aaPredicted RBP23.4■■□□□ 1.34
RER1-206ENST00000462129 ZNF790Q6PG37 636 aa23.4■■□□□ 1.34
RER1-206ENST00000462129 TRIM35Q9UPQ4 493 aa23.4■■□□□ 1.34
RER1-206ENST00000462129 CACNA1SQ13698 1873 aa23.4■■□□□ 1.34
RER1-206ENST00000462129 BTBD11A6QL63 1104 aa23.39■■□□□ 1.33
RER1-206ENST00000462129 IL6STP40189 918 aaPredicted RBP23.39■■□□□ 1.33
RER1-206ENST00000462129 ST5P78524 1137 aa23.39■■□□□ 1.33
RER1-206ENST00000462129 HNRNPUQ00839 825 aaKnown RBP eCLIP23.39■■□□□ 1.33
RER1-206ENST00000462129 PRPF40BQ6NWY9 871 aaKnown RBP23.39■■□□□ 1.33
RER1-206ENST00000462129 NPM2Q86SE8 214 aaKnown RBP23.39■■□□□ 1.33
RER1-206ENST00000462129 CNKSR1Q969H4 720 aa23.39■■□□□ 1.33
RER1-206ENST00000462129 SETDB2Q96T68 719 aa23.39■■□□□ 1.33
RER1-206ENST00000462129 THUMPD2Q9BTF0 503 aaKnown RBP23.39■■□□□ 1.33
RER1-206ENST00000462129 TEX13AQ9BXU3 409 aaPredicted RBP23.39■■□□□ 1.33
RER1-206ENST00000462129 STYK1Q6J9G0 422 aa23.38■■□□□ 1.33
RER1-206ENST00000462129 LAS1LQ9Y4W2 734 aaKnown RBP23.38■■□□□ 1.33
RER1-206ENST00000462129 SLX4Q8IY92 1834 aa23.38■■□□□ 1.33
RER1-206ENST00000462129 CAMTA2O94983 1202 aa23.37■■□□□ 1.33
RER1-206ENST00000462129 WWC1Q8IX03 1113 aa23.37■■□□□ 1.33
RER1-206ENST00000462129 A1BGP04217 495 aa23.36■■□□□ 1.33
RER1-206ENST00000462129 SRGNP10124 158 aa23.36■■□□□ 1.33
RER1-206ENST00000462129 SOGA3Q5TF21 947 aa23.36■■□□□ 1.33
RER1-206ENST00000462129 CNTNAP1P78357 1384 aa23.36■■□□□ 1.33
RER1-206ENST00000462129 SIPA1L3O60292 1781 aaPredicted RBP23.35■■□□□ 1.33
RER1-206ENST00000462129 BCORQ6W2J9 1755 aa23.35■■□□□ 1.33
RER1-206ENST00000462129 ARFGEF2Q9Y6D5 1785 aa23.35■■□□□ 1.33
RER1-206ENST00000462129 MASTLQ96GX5 879 aa23.35■■□□□ 1.33
RER1-206ENST00000462129 FMNL2Q96PY5 1086 aa23.35■■□□□ 1.33
RER1-206ENST00000462129 TSPYL4Q9UJ04 414 aa23.35■■□□□ 1.33
RER1-206ENST00000462129 IQCA1LA6NCM1 817 aa23.34■■□□□ 1.33
RER1-206ENST00000462129 FOXN1O15353 648 aa23.34■■□□□ 1.33
RER1-206ENST00000462129 GNAI1P63096 354 aa23.34■■□□□ 1.33
RER1-206ENST00000462129 WDR63Q8IWG1 891 aa23.34■■□□□ 1.33
RER1-206ENST00000462129 BABAM1Q9NWV8 329 aa23.34■■□□□ 1.33
RER1-206ENST00000462129 LDHDQ86WU2 507 aa23.33■■□□□ 1.33
RER1-206ENST00000462129 DZIP3Q86Y13 1208 aaKnown RBP23.33■■□□□ 1.33
RER1-206ENST00000462129 TAF1DQ9H5J8 278 aaPredicted RBP23.32■■□□□ 1.32
RER1-206ENST00000462129 IFT57Q9NWB7 429 aa23.32■■□□□ 1.32
RER1-206ENST00000462129 PASKQ96RG2 1323 aa23.32■■□□□ 1.32
RER1-206ENST00000462129 CCDC93Q567U6 631 aa23.31■■□□□ 1.32
RER1-206ENST00000462129 L3MBTL3Q96JM7 780 aaPredicted RBP23.31■■□□□ 1.32
RER1-206ENST00000462129 CFAP44Q96MT7 982 aa23.31■■□□□ 1.32
RER1-206ENST00000462129 IL16Q14005 1332 aa23.31■■□□□ 1.32
RER1-206ENST00000462129 PIP4K2AP48426 406 aaPredicted RBP23.3■■□□□ 1.32
RER1-206ENST00000462129 EAPPQ56P03 285 aaPredicted RBP23.3■■□□□ 1.32
RER1-206ENST00000462129 AIDAQ96BJ3 306 aa23.3■■□□□ 1.32
RER1-206ENST00000462129 SCN4AP35499 1836 aa23.3■■□□□ 1.32
RER1-206ENST00000462129 KCNQ3O43525 872 aa23.29■■□□□ 1.32
RER1-206ENST00000462129 NBPF5PQ86XG9 351 aaPredicted RBP23.29■■□□□ 1.32
RER1-206ENST00000462129 ZNF541Q9H0D2 1346 aa23.29■■□□□ 1.32
RER1-206ENST00000462129 GOLGA2Q08379 1002 aa23.28■■□□□ 1.32
RER1-206ENST00000462129 MYH16Q9H6N6 1097 aa23.28■■□□□ 1.32
RER1-206ENST00000462129 PRDM10Q9NQV6 1147 aa23.28■■□□□ 1.32
RER1-206ENST00000462129 ZNF277Q9NRM2 450 aaPredicted RBP23.28■■□□□ 1.32
RER1-206ENST00000462129 MIS18AQ9NYP9 233 aa23.28■■□□□ 1.32
RER1-206ENST00000462129 TMEM88BA6NKF7 163 aa23.27■■□□□ 1.32
RER1-206ENST00000462129 CTCFP49711 727 aaPredicted RBP23.27■■□□□ 1.32
RER1-206ENST00000462129 VEGFBP49765 207 aa23.27■■□□□ 1.32
RER1-206ENST00000462129 FKBP4Q02790 459 aaKnown RBP eCLIP23.27■■□□□ 1.32
RER1-206ENST00000462129 C7orf43Q8WVR3 580 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms