RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 COL14A1Q05707 1796 aaKnown RBP7.54□□□□□ -1.2
BRCA1-206ENST00000461574 ZMYND10O75800 440 aa7.54□□□□□ -1.2
BRCA1-206ENST00000461574 MTMR2Q13614 643 aa7.54□□□□□ -1.2
BRCA1-206ENST00000461574 R3HDM1Q15032 1099 aaKnown RBP7.54□□□□□ -1.2
BRCA1-206ENST00000461574 AMHR2Q16671 573 aa7.54□□□□□ -1.2
BRCA1-206ENST00000461574 GIGYF2Q6Y7W6 1299 aaKnown RBP7.54□□□□□ -1.2
BRCA1-206ENST00000461574 ZNF511Q8NB15 262 aa7.54□□□□□ -1.2
BRCA1-206ENST00000461574 PPARGC1BQ86YN6 1023 aaKnown RBP7.53□□□□□ -1.2
BRCA1-206ENST00000461574 SLC16A10Q8TF71 515 aa7.53□□□□□ -1.2
BRCA1-206ENST00000461574 BEGAINQ9BUH8 593 aa7.53□□□□□ -1.2
BRCA1-206ENST00000461574 PLEKHH1Q9ULM0 1364 aa7.53□□□□□ -1.2
BRCA1-206ENST00000461574 SPDYE5A6NIY4 337 aa7.52□□□□□ -1.21
BRCA1-206ENST00000461574 VARSP26640 1264 aaKnown RBP7.52□□□□□ -1.21
BRCA1-206ENST00000461574 GMPRP36959 345 aa7.52□□□□□ -1.21
BRCA1-206ENST00000461574 VEGFBP49765 207 aa7.52□□□□□ -1.21
BRCA1-206ENST00000461574 RGL3Q3MIN7 710 aa7.52□□□□□ -1.21
BRCA1-206ENST00000461574 DESI1Q6ICB0 168 aa7.52□□□□□ -1.21
BRCA1-206ENST00000461574 TMEM132EQ6IEE7 984 aa7.52□□□□□ -1.21
BRCA1-206ENST00000461574 ZFP42Q96MM3 310 aa7.52□□□□□ -1.21
BRCA1-206ENST00000461574 BTG4Q9NY30 223 aa7.52□□□□□ -1.21
BRCA1-206ENST00000461574 YTHDC2Q9H6S0 1430 aaKnown RBP7.52□□□□□ -1.21
BRCA1-206ENST00000461574 ADGRF5Q8IZF2 1346 aa7.52□□□□□ -1.21
BRCA1-206ENST00000461574 NRXN1Q9ULB1 1477 aa7.51□□□□□ -1.21
BRCA1-206ENST00000461574 SBNO1A3KN83 1393 aa7.51□□□□□ -1.21
BRCA1-206ENST00000461574 ABCC11Q96J66 1382 aa7.51□□□□□ -1.21
BRCA1-206ENST00000461574 ANKRD30BQ9BXX2 1392 aa7.51□□□□□ -1.21
BRCA1-206ENST00000461574 YY1P25490 414 aa7.51□□□□□ -1.21
BRCA1-206ENST00000461574 NNTQ13423 1086 aa7.51□□□□□ -1.21
BRCA1-206ENST00000461574 FAM182BQ5T319 152 aa7.51□□□□□ -1.21
BRCA1-206ENST00000461574 ZC3H15Q8WU90 426 aaKnown RBP7.51□□□□□ -1.21
BRCA1-206ENST00000461574 TBC1D2Q9BYX2 928 aa7.51□□□□□ -1.21
BRCA1-206ENST00000461574 PCDHB15Q9Y5E8 787 aa7.51□□□□□ -1.21
BRCA1-206ENST00000461574 THSD7AQ9UPZ6 1657 aa7.51□□□□□ -1.21
BRCA1-206ENST00000461574 TRPM3Q9HCF6 1732 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-206ENST00000461574 PLEKHG3A1L390 1219 aa7.5□□□□□ -1.21
BRCA1-206ENST00000461574 FAM83GA6ND36 823 aa7.5□□□□□ -1.21
BRCA1-206ENST00000461574 CTHP32929 405 aa7.5□□□□□ -1.21
BRCA1-206ENST00000461574 SAFB2Q14151 953 aaKnown RBP eCLIP7.5□□□□□ -1.21
BRCA1-206ENST00000461574 RSBN1LQ6PCB5 846 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-206ENST00000461574 MPNDQ8N594 471 aa7.5□□□□□ -1.21
BRCA1-206ENST00000461574 PPP1R1BQ9UD71 204 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-206ENST00000461574 PIK3C2GO75747 1445 aa7.5□□□□□ -1.21
BRCA1-206ENST00000461574 RREB1Q92766 1687 aa7.5□□□□□ -1.21
BRCA1-206ENST00000461574 ALS2Q96Q42 1657 aa7.5□□□□□ -1.21
BRCA1-206ENST00000461574 GPRASP1Q5JY77 1395 aa7.49□□□□□ -1.21
BRCA1-206ENST00000461574 CFAP99D6REC4 459 aa7.49□□□□□ -1.21
BRCA1-206ENST00000461574 H3BM21 787 aa7.49□□□□□ -1.21
BRCA1-206ENST00000461574 EZH2Q15910 746 aaKnown RBP7.49□□□□□ -1.21
BRCA1-206ENST00000461574 LYPD8Q6UX82 237 aa7.49□□□□□ -1.21
BRCA1-206ENST00000461574 PMFBP1Q8TBY8 1022 aa7.49□□□□□ -1.21
BRCA1-206ENST00000461574 IRF7Q92985 503 aa7.49□□□□□ -1.21
BRCA1-206ENST00000461574 DISP2A7MBM2 1401 aa7.49□□□□□ -1.21
BRCA1-206ENST00000461574 NUP188Q5SRE5 1749 aa7.49□□□□□ -1.21
BRCA1-206ENST00000461574 CRYBG1Q9Y4K1 1723 aa7.49□□□□□ -1.21
BRCA1-206ENST00000461574 DHX57Q6P158 1386 aaKnown RBP7.48□□□□□ -1.21
BRCA1-206ENST00000461574 TRIM37O94972 964 aa7.48□□□□□ -1.21
BRCA1-206ENST00000461574 APBA3O96018 575 aa7.48□□□□□ -1.21
BRCA1-206ENST00000461574 TIMP2P16035 220 aa7.48□□□□□ -1.21
BRCA1-206ENST00000461574 LORP23490 312 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-206ENST00000461574 GJA5P36382 358 aa7.48□□□□□ -1.21
BRCA1-206ENST00000461574 WDR4P57081 412 aaKnown RBP7.48□□□□□ -1.21
BRCA1-206ENST00000461574 ITSN1Q15811 1721 aa7.48□□□□□ -1.21
BRCA1-206ENST00000461574 MRPL14Q6P1L8 145 aaKnown RBP7.48□□□□□ -1.21
BRCA1-206ENST00000461574 ANKARQ7Z5J8 1434 aa7.48□□□□□ -1.21
BRCA1-206ENST00000461574 NPAS3Q8IXF0 933 aa7.48□□□□□ -1.21
BRCA1-206ENST00000461574 FOXJ1Q92949 421 aa7.48□□□□□ -1.21
BRCA1-206ENST00000461574 PRDM11Q9NQV5 511 aa7.48□□□□□ -1.21
BRCA1-206ENST00000461574 POGKQ9P215 609 aa7.48□□□□□ -1.21
BRCA1-206ENST00000461574 MAP10Q9P2G4 905 aa7.48□□□□□ -1.21
BRCA1-206ENST00000461574 PHRF1Q9P1Y6 1649 aaKnown RBP7.48□□□□□ -1.21
BRCA1-206ENST00000461574 ERBB4Q15303 1308 aa7.48□□□□□ -1.21
BRCA1-206ENST00000461574 SPATA31A5Q5VU36 1347 aa7.48□□□□□ -1.21
BRCA1-206ENST00000461574 SPATA31A7Q8IWB4 1347 aa7.48□□□□□ -1.21
BRCA1-206ENST00000461574 EIF3AQ14152 1382 aaKnown RBP7.47□□□□□ -1.21
BRCA1-206ENST00000461574 PARD3Q8TEW0 1356 aa7.47□□□□□ -1.21
BRCA1-206ENST00000461574 SPATA31E1Q6ZUB1 1445 aa7.47□□□□□ -1.21
BRCA1-206ENST00000461574 NBPF8Q3BBV2 869 aa7.47□□□□□ -1.21
BRCA1-206ENST00000461574 NBPF14Q5TI25 921 aa7.47□□□□□ -1.21
BRCA1-206ENST00000461574 PARP9Q8IXQ6 854 aa7.47□□□□□ -1.21
BRCA1-206ENST00000461574 PRAM1Q96QH2 718 aa7.47□□□□□ -1.21
BRCA1-206ENST00000461574 KLF16Q9BXK1 252 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-206ENST00000461574 SOBPA7XYQ1 873 aa7.46□□□□□ -1.22
BRCA1-206ENST00000461574 SPTLC1O15269 473 aa7.46□□□□□ -1.22
BRCA1-206ENST00000461574 ADH1CP00326 375 aa7.46□□□□□ -1.22
BRCA1-206ENST00000461574 FAM196AQ6ZSG2 479 aa7.46□□□□□ -1.22
BRCA1-206ENST00000461574 FAM174AQ8TBP5 190 aa7.46□□□□□ -1.22
BRCA1-206ENST00000461574 PURBQ96QR8 312 aaKnown RBP7.46□□□□□ -1.22
BRCA1-206ENST00000461574 STRN4Q9NRL3 753 aa7.46□□□□□ -1.22
BRCA1-206ENST00000461574 USP35Q9P2H5 1018 aa7.46□□□□□ -1.22
BRCA1-206ENST00000461574 CAMTA1Q9Y6Y1 1673 aa7.45□□□□□ -1.22
BRCA1-206ENST00000461574 F12P00748 615 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-206ENST00000461574 PDE3BQ13370 1112 aa7.45□□□□□ -1.22
BRCA1-206ENST00000461574 ARID5BQ14865 1188 aa7.45□□□□□ -1.22
BRCA1-206ENST00000461574 DIXDC1Q155Q3 683 aa7.45□□□□□ -1.22
BRCA1-206ENST00000461574 ZSCAN1Q8NBB4 408 aa7.45□□□□□ -1.22
BRCA1-206ENST00000461574 NGDNQ8NEJ9 315 aaKnown RBP7.45□□□□□ -1.22
BRCA1-206ENST00000461574 SIRT1Q96EB6 747 aa7.45□□□□□ -1.22
BRCA1-206ENST00000461574 DLC1Q96QB1 1528 aa7.45□□□□□ -1.22
BRCA1-206ENST00000461574 TULP4Q9NRJ4 1543 aa7.45□□□□□ -1.22
BRCA1-206ENST00000461574 ACIN1Q9UKV3 1341 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms