RNA–Protein interactions for RNA: ENST00000461544.2

PCBP4-204, Transcript of poly(rC) binding protein 4, humanhuman

TSL 4

Gene PCBP4, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-204ENST00000461544 ZNF496Q96IT1 587 aaPredicted RBP17.1■□□□□ 0.33
PCBP4-204ENST00000461544 ZBTB1Q9Y2K1 713 aa17.1■□□□□ 0.33
PCBP4-204ENST00000461544 COL15A1P39059 1388 aa17.1■□□□□ 0.33
PCBP4-204ENST00000461544 DICER1Q9UPY3 1922 aaKnown RBP17.09■□□□□ 0.33
PCBP4-204ENST00000461544 BICDL1Q6ZP65 573 aa17.09■□□□□ 0.33
PCBP4-204ENST00000461544 FMNL2Q96PY5 1086 aa17.09■□□□□ 0.33
PCBP4-204ENST00000461544 FER1L6Q2WGJ9 1857 aa17.08■□□□□ 0.33
PCBP4-204ENST00000461544 PASKQ96RG2 1323 aa17.08■□□□□ 0.32
PCBP4-204ENST00000461544 CTCFP49711 727 aaPredicted RBP17.08■□□□□ 0.32
PCBP4-204ENST00000461544 VEGFBP49765 207 aa17.08■□□□□ 0.32
PCBP4-204ENST00000461544 ZNF622Q969S3 477 aaKnown RBP eCLIP17.08■□□□□ 0.32
PCBP4-204ENST00000461544 LAMB4A4D0S4 1761 aa17.07■□□□□ 0.32
PCBP4-204ENST00000461544 LBX1P52954 281 aa17.07■□□□□ 0.32
PCBP4-204ENST00000461544 CCDC24Q8N4L8 307 aa17.07■□□□□ 0.32
PCBP4-204ENST00000461544 ANKRD31Q8N7Z5 1873 aa17.07■□□□□ 0.32
PCBP4-204ENST00000461544 STARD3NLO95772 234 aa17.06■□□□□ 0.32
PCBP4-204ENST00000461544 LMOD3Q0VAK6 560 aa17.06■□□□□ 0.32
PCBP4-204ENST00000461544 CCDC146Q8IYE0 955 aa17.06■□□□□ 0.32
PCBP4-204ENST00000461544 TEX13AQ9BXU3 409 aaPredicted RBP17.06■□□□□ 0.32
PCBP4-204ENST00000461544 ANP32CO43423 234 aa17.05■□□□□ 0.32
PCBP4-204ENST00000461544 KCNQ3O43525 872 aa17.05■□□□□ 0.32
PCBP4-204ENST00000461544 CANXP27824 592 aaKnown RBP17.05■□□□□ 0.32
PCBP4-204ENST00000461544 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
PCBP4-204ENST00000461544 FAM161AQ3B820 660 aa17.05■□□□□ 0.32
PCBP4-204ENST00000461544 PNISRQ8TF01 805 aaKnown RBP17.05■□□□□ 0.32
PCBP4-204ENST00000461544 AIDAQ96BJ3 306 aa17.05■□□□□ 0.32
PCBP4-204ENST00000461544 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
PCBP4-204ENST00000461544 WBP1LQ9NX94 342 aa17.05■□□□□ 0.32
PCBP4-204ENST00000461544 SCN7AQ01118 1682 aa17.04■□□□□ 0.32
PCBP4-204ENST00000461544 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
PCBP4-204ENST00000461544 RIPK4P57078 832 aa17.04■□□□□ 0.32
PCBP4-204ENST00000461544 TBC1D9BQ66K14 1250 aa17.04■□□□□ 0.32
PCBP4-204ENST00000461544 ABHD8Q96I13 439 aa17.04■□□□□ 0.32
PCBP4-204ENST00000461544 TAOK3Q9H2K8 898 aa17.04■□□□□ 0.32
PCBP4-204ENST00000461544 ADAMTS8Q9UP79 889 aa17.04■□□□□ 0.32
PCBP4-204ENST00000461544 LTBP3Q9NS15 1303 aa17.03■□□□□ 0.32
PCBP4-204ENST00000461544 ITGBL1O95965 494 aaPredicted RBP17.03■□□□□ 0.32
PCBP4-204ENST00000461544 LDHDQ86WU2 507 aa17.03■□□□□ 0.32
PCBP4-204ENST00000461544 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
PCBP4-204ENST00000461544 BRIP1Q9BX63 1249 aa17.03■□□□□ 0.32
PCBP4-204ENST00000461544 COL11A2P13942 1736 aaPredicted RBP17.03■□□□□ 0.32
PCBP4-204ENST00000461544 TMEM88BA6NKF7 163 aa17.02■□□□□ 0.32
PCBP4-204ENST00000461544 PDE6BP35913 854 aa17.02■□□□□ 0.32
PCBP4-204ENST00000461544 PRR5LQ6MZQ0 368 aa17.02■□□□□ 0.32
PCBP4-204ENST00000461544 TAF1DQ9H5J8 278 aaPredicted RBP17.02■□□□□ 0.32
PCBP4-204ENST00000461544 SLX4Q8IY92 1834 aa17.02■□□□□ 0.31
PCBP4-204ENST00000461544 SNRPA1P09661 255 aaKnown RBP17.01■□□□□ 0.31
PCBP4-204ENST00000461544 EIF5P55010 431 aaKnown RBP17.01■□□□□ 0.31
PCBP4-204ENST00000461544 RRP7AQ9Y3A4 280 aaKnown RBP17.01■□□□□ 0.31
PCBP4-204ENST00000461544 HSPA8P11142 646 aaKnown RBP17■□□□□ 0.31
PCBP4-204ENST00000461544 BCORQ6W2J9 1755 aa17■□□□□ 0.31
PCBP4-204ENST00000461544 IQCA1LA6NCM1 817 aa16.99■□□□□ 0.31
PCBP4-204ENST00000461544 L3MBTL3Q96JM7 780 aaPredicted RBP16.99■□□□□ 0.31
PCBP4-204ENST00000461544 MIS18AQ9NYP9 233 aa16.99■□□□□ 0.31
PCBP4-204ENST00000461544 PDZRN3Q9UPQ7 1066 aa16.99■□□□□ 0.31
PCBP4-204ENST00000461544 SCN4AP35499 1836 aa16.98■□□□□ 0.31
PCBP4-204ENST00000461544 A0A087WZG4 1122 aa16.98■□□□□ 0.31
PCBP4-204ENST00000461544 IL6STP40189 918 aaPredicted RBP16.98■□□□□ 0.31
PCBP4-204ENST00000461544 NEUROD2Q15784 382 aa16.98■□□□□ 0.31
PCBP4-204ENST00000461544 EAPPQ56P03 285 aaPredicted RBP16.98■□□□□ 0.31
PCBP4-204ENST00000461544 PRPF40BQ6NWY9 871 aaKnown RBP16.98■□□□□ 0.31
PCBP4-204ENST00000461544 TBC1D2BQ9UPU7 963 aa16.98■□□□□ 0.31
PCBP4-204ENST00000461544 CACNA1SQ13698 1873 aa16.98■□□□□ 0.31
PCBP4-204ENST00000461544 PRAMEF22A3QJZ6 481 aa16.97■□□□□ 0.31
PCBP4-204ENST00000461544 SRGNP10124 158 aa16.97■□□□□ 0.31
PCBP4-204ENST00000461544 CCDC184Q52MB2 194 aa16.97■□□□□ 0.31
PCBP4-204ENST00000461544 NPM2Q86SE8 214 aaKnown RBP16.97■□□□□ 0.31
PCBP4-204ENST00000461544 CNKSR1Q969H4 720 aa16.97■□□□□ 0.31
PCBP4-204ENST00000461544 MRS2Q9HD23 443 aa16.97■□□□□ 0.31
PCBP4-204ENST00000461544 BABAM1Q9NWV8 329 aa16.97■□□□□ 0.31
PCBP4-204ENST00000461544 TSPYL4Q9UJ04 414 aa16.97■□□□□ 0.31
PCBP4-204ENST00000461544 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
PCBP4-204ENST00000461544 ZNF330Q9Y3S2 320 aaPredicted RBP16.97■□□□□ 0.31
PCBP4-204ENST00000461544 RASSF10A6NK89 507 aa16.96■□□□□ 0.31
PCBP4-204ENST00000461544 A1BGP04217 495 aa16.96■□□□□ 0.31
PCBP4-204ENST00000461544 EIF4A1P60842 406 aaKnown RBP16.96■□□□□ 0.31
PCBP4-204ENST00000461544 DEFB115Q30KQ5 88 aa16.96■□□□□ 0.31
PCBP4-204ENST00000461544 STYK1Q6J9G0 422 aa16.96■□□□□ 0.31
PCBP4-204ENST00000461544 USP16Q9Y5T5 823 aa16.96■□□□□ 0.31
PCBP4-204ENST00000461544 ZNF541Q9H0D2 1346 aa16.96■□□□□ 0.3
PCBP4-204ENST00000461544 C7orf43Q8WVR3 580 aa16.95■□□□□ 0.3
PCBP4-204ENST00000461544 TRIM35Q9UPQ4 493 aa16.95■□□□□ 0.3
PCBP4-204ENST00000461544 WDR33Q9C0J8 1336 aaKnown RBP16.95■□□□□ 0.3
PCBP4-204ENST00000461544 MAP1SQ66K74 1059 aaPredicted RBP16.94■□□□□ 0.3
PCBP4-204ENST00000461544 CNTROBQ8N137 903 aa16.94■□□□□ 0.3
PCBP4-204ENST00000461544 CNBD1Q8NA66 436 aa16.94■□□□□ 0.3
PCBP4-204ENST00000461544 HACL1Q9UJ83 578 aa16.94■□□□□ 0.3
PCBP4-204ENST00000461544 ADAMTSL1Q8N6G6 1762 aa16.94■□□□□ 0.3
PCBP4-204ENST00000461544 CCDC85CA6NKD9 419 aa16.93■□□□□ 0.3
PCBP4-204ENST00000461544 APAF1O14727 1248 aa16.93■□□□□ 0.3
PCBP4-204ENST00000461544 EPHX2P34913 555 aa16.93■□□□□ 0.3
PCBP4-204ENST00000461544 MLLT1Q03111 559 aaPredicted RBP16.93■□□□□ 0.3
PCBP4-204ENST00000461544 SOGA3Q5TF21 947 aa16.93■□□□□ 0.3
PCBP4-204ENST00000461544 MASTLQ96GX5 879 aa16.93■□□□□ 0.3
PCBP4-204ENST00000461544 SETDB2Q96T68 719 aa16.93■□□□□ 0.3
PCBP4-204ENST00000461544 ZNF277Q9NRM2 450 aaPredicted RBP16.93■□□□□ 0.3
PCBP4-204ENST00000461544 RGS19P49795 217 aa16.92■□□□□ 0.3
PCBP4-204ENST00000461544 MAP2K1Q02750 393 aaPredicted RBP16.92■□□□□ 0.3
PCBP4-204ENST00000461544 OLFM4Q6UX06 510 aa16.92■□□□□ 0.3
PCBP4-204ENST00000461544 RNF123Q5XPI4 1314 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms