RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 UVSSAQ2YD98 709 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 TBC1D5Q92609 795 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 RMND1Q9NWS8 449 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 GNAT3A8MTJ3 354 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 IVLP07476 585 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 BICDL1Q6ZP65 573 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 USP37Q86T82 979 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 JADE2Q9NQC1 790 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 PRDM10Q9NQV6 1147 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 LIMCH1Q9UPQ0 1083 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 ATAD2Q6PL18 1390 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 CCDC174Q6PII3 467 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 SYCP3Q8IZU3 236 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 TRMT1Q9NXH9 659 aaKnown RBP10.33□□□□□ -0.76
BRCA1-205ENST00000461221 MNAT1P51948 309 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 NFE2L2Q16236 605 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 THEMISQ8N1K5 641 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-205ENST00000461221 C16orf45Q96MC5 204 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-205ENST00000461221 TTC14Q96N46 770 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 CCDC171Q6TFL3 1326 aa10.33□□□□□ -0.76
BRCA1-205ENST00000461221 ARHGAP5Q13017 1502 aa10.32□□□□□ -0.76
BRCA1-205ENST00000461221 NOL3O60936 208 aaKnown RBP10.32□□□□□ -0.76
BRCA1-205ENST00000461221 PSMD1Q99460 953 aa10.32□□□□□ -0.76
BRCA1-205ENST00000461221 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.32□□□□□ -0.764e-6■■□□□ 13.9
BRCA1-205ENST00000461221 IFIT3O14879 490 aaKnown RBP10.32□□□□□ -0.76
BRCA1-205ENST00000461221 MRPS9P82933 396 aaKnown RBP10.32□□□□□ -0.76
BRCA1-205ENST00000461221 SMC6Q96SB8 1091 aa10.32□□□□□ -0.76
BRCA1-205ENST00000461221 PRDM11Q9NQV5 511 aa10.32□□□□□ -0.76
BRCA1-205ENST00000461221 SPTY2D1Q68D10 685 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-205ENST00000461221 TIGD1Q96MW7 591 aa10.32□□□□□ -0.76
BRCA1-205ENST00000461221 SELENOOQ9BVL4 669 aa10.32□□□□□ -0.76
BRCA1-205ENST00000461221 LIG1P18858 919 aa10.32□□□□□ -0.76
BRCA1-205ENST00000461221 NAP1L3Q99457 506 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-205ENST00000461221 CABP1Q9NZU7 370 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 PUF60Q9UHX1 559 aaKnown RBP10.31□□□□□ -0.76
BRCA1-205ENST00000461221 AKNAQ7Z591 1439 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 STX6O43752 255 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 ZPR1O75312 459 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 CEP135Q66GS9 1140 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 PRIMPOLQ96LW4 560 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 OPA1O60313 960 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 TBCAO75347 108 aaKnown RBP10.31□□□□□ -0.76
BRCA1-205ENST00000461221 MSL1Q68DK7 614 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 TMX1Q9H3N1 280 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 USP25Q9UHP3 1055 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 NUTM2BA6NNL0 878 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-205ENST00000461221 NUTM2EB1AL46 878 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-205ENST00000461221 IDEP14735 1019 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 CYLC1P35663 651 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-205ENST00000461221 XPCQ01831 940 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-205ENST00000461221 NUTM2AQ8IVF1 878 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-205ENST00000461221 CTAGE1Q96RT6 745 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 ANKIB1Q9P2G1 1089 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 EXOC6BQ9Y2D4 811 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 SEPT6Q14141 434 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 TTF1Q15361 905 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-205ENST00000461221 PPP4R3BQ5MIZ7 849 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 TMEM57Q8N5G2 664 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 ANKS4BQ8N8V4 417 aa10.31□□□□□ -0.76
BRCA1-205ENST00000461221 NDC80O14777 642 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 ATP2A1O14983 1001 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 IFIT5Q13325 482 aaKnown RBP10.3□□□□□ -0.76
BRCA1-205ENST00000461221 ERMNQ8TAM6 284 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 SERPINA10Q9UK55 444 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 ALDH1L2Q3SY69 923 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 CKAP2LQ8IYA6 745 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 BOLA2Q9H3K6 86 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 EXOC1Q9NV70 894 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 PRDM2Q13029 1718 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 DYNC1I1O14576 645 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 SLU7O95391 586 aaKnown RBP10.3□□□□□ -0.76
BRCA1-205ENST00000461221 UBA7P41226 1012 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 GUCY1B3Q02153 619 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 WDR78Q5VTH9 848 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 CCDC102BQ68D86 513 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 KCNH5Q8NCM2 988 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 CCDC85AQ96PX6 553 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-205ENST00000461221 MYO1BO43795 1136 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 AKR1B10O60218 316 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 LDHCP07864 332 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 GNG11P61952 73 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 MAP7D1Q3KQU3 841 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 KIAA1524Q8TCG1 905 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 SYNCQ9H7C4 482 aa10.3□□□□□ -0.76
BRCA1-205ENST00000461221 BMP15O95972 392 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 IARSP41252 1262 aaKnown RBP10.29□□□□□ -0.76
BRCA1-205ENST00000461221 ERBINQ96RT1 1412 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 CTAGE15A4D2H0 777 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 TUBB4AP04350 444 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 CTAGE8P0CG41 777 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 CTAGE6Q86UF2 777 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 CTAGE4Q8IX94 777 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 TRERF1Q96PN7 1200 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 UTP14AQ9BVJ6 771 aaKnown RBP10.29□□□□□ -0.76
BRCA1-205ENST00000461221 CCDC160A6NGH7 325 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 TRAF1Q13077 416 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 BICD1Q96G01 975 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 TRIM47Q96LD4 638 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 SLC12A5Q9H2X9 1139 aa10.29□□□□□ -0.76
BRCA1-205ENST00000461221 ADCY5O95622 1261 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms