RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 LMOD2Q6P5Q4 547 aa11.97□□□□□ -0.49
DHFR2-203ENST00000461173 NUTM1Q86Y26 1132 aa11.97□□□□□ -0.49
DHFR2-203ENST00000461173 DCAF5Q96JK2 942 aa11.97□□□□□ -0.49
DHFR2-203ENST00000461173 GZF1Q9H116 711 aaPredicted RBP11.97□□□□□ -0.49
DHFR2-203ENST00000461173 ECHDC1Q9NTX5 307 aa11.97□□□□□ -0.49
DHFR2-203ENST00000461173 PARP4Q9UKK3 1724 aaKnown RBP11.96□□□□□ -0.49
DHFR2-203ENST00000461173 HIP1O00291 1037 aa11.96□□□□□ -0.49
DHFR2-203ENST00000461173 ZNF445P59923 1031 aa11.96□□□□□ -0.49
DHFR2-203ENST00000461173 PROSER3Q2NL68 480 aa11.96□□□□□ -0.49
DHFR2-203ENST00000461173 KCNB2Q92953 911 aa11.96□□□□□ -0.49
DHFR2-203ENST00000461173 SNRKQ9NRH2 765 aa11.96□□□□□ -0.49
DHFR2-203ENST00000461173 LMBRD1Q9NUN5 540 aa11.96□□□□□ -0.49
DHFR2-203ENST00000461173 BRD1O95696 1058 aa11.95□□□□□ -0.5
DHFR2-203ENST00000461173 ZGPATQ8N5A5 531 aaKnown RBP11.95□□□□□ -0.5
DHFR2-203ENST00000461173 LSG1Q9H089 658 aaKnown RBP11.95□□□□□ -0.5
DHFR2-203ENST00000461173 PALD1Q9ULE6 856 aa11.95□□□□□ -0.5
DHFR2-203ENST00000461173 ERBB4Q15303 1308 aa11.95□□□□□ -0.5
DHFR2-203ENST00000461173 ANXA1P04083 346 aa11.95□□□□□ -0.5
DHFR2-203ENST00000461173 SNRPA1P09661 255 aaKnown RBP11.95□□□□□ -0.5
DHFR2-203ENST00000461173 NEXNQ0ZGT2 675 aa11.95□□□□□ -0.5
DHFR2-203ENST00000461173 KIAA1211Q6ZU35 1233 aa11.95□□□□□ -0.5
DHFR2-203ENST00000461173 EVI5LQ96CN4 794 aa11.95□□□□□ -0.5
DHFR2-203ENST00000461173 METTL22Q9BUU2 404 aaPredicted RBP11.95□□□□□ -0.5
DHFR2-203ENST00000461173 ZDHHC9Q9Y397 364 aa11.95□□□□□ -0.5
DHFR2-203ENST00000461173 DDX49Q9Y6V7 483 aaKnown RBP11.95□□□□□ -0.5
DHFR2-203ENST00000461173 SPATA31A3Q5VYP0 1347 aa11.95□□□□□ -0.5
DHFR2-203ENST00000461173 MEGF6O75095 1541 aa11.94□□□□□ -0.5
DHFR2-203ENST00000461173 ZC3H6P61129 1189 aaKnown RBP11.94□□□□□ -0.5
DHFR2-203ENST00000461173 OS9Q13438 667 aaPredicted RBP11.94□□□□□ -0.5
DHFR2-203ENST00000461173 LRP10Q7Z4F1 713 aa11.94□□□□□ -0.5
DHFR2-203ENST00000461173 TICAM2Q86XR7 235 aa11.94□□□□□ -0.5
DHFR2-203ENST00000461173 KLHL34Q8N239 644 aa11.94□□□□□ -0.5
DHFR2-203ENST00000461173 KAZALD1Q96I82 304 aa11.94□□□□□ -0.5
DHFR2-203ENST00000461173 TM6SF1Q9BZW5 370 aa11.94□□□□□ -0.5
DHFR2-203ENST00000461173 NLRP2Q9NX02 1062 aa11.94□□□□□ -0.5
DHFR2-203ENST00000461173 IFIT2P09913 472 aaKnown RBP11.93□□□□□ -0.5
DHFR2-203ENST00000461173 NEURL1BA8MQ27 555 aa11.93□□□□□ -0.5
DHFR2-203ENST00000461173 MBD3O95983 291 aa11.93□□□□□ -0.5
DHFR2-203ENST00000461173 IGKV5-2P06315 115 aa11.93□□□□□ -0.5
DHFR2-203ENST00000461173 PDIA4P13667 645 aaKnown RBP11.93□□□□□ -0.5
DHFR2-203ENST00000461173 G3BP1Q13283 466 aaKnown RBP eCLIP11.93□□□□□ -0.5
DHFR2-203ENST00000461173 CWF19L2Q2TBE0 894 aaKnown RBP11.93□□□□□ -0.5
DHFR2-203ENST00000461173 MCTP1Q6DN14 999 aa11.93□□□□□ -0.5
DHFR2-203ENST00000461173 RIC3Q7Z5B4 369 aa11.93□□□□□ -0.5
DHFR2-203ENST00000461173 SUCLG2Q96I99 432 aa11.93□□□□□ -0.5
DHFR2-203ENST00000461173 TTC14Q96N46 770 aa11.93□□□□□ -0.5
DHFR2-203ENST00000461173 FMNL2Q96PY5 1086 aa11.93□□□□□ -0.5
DHFR2-203ENST00000461173 STRCP1A6NGW2 1772 aa11.92□□□□□ -0.5
DHFR2-203ENST00000461173 C5P01031 1676 aa11.92□□□□□ -0.5
DHFR2-203ENST00000461173 RFX7Q2KHR2 1363 aa11.92□□□□□ -0.5
DHFR2-203ENST00000461173 GCKRQ14397 625 aa11.92□□□□□ -0.5
DHFR2-203ENST00000461173 IL25Q9H293 177 aa11.92□□□□□ -0.5
DHFR2-203ENST00000461173 COPRSQ9NQ92 184 aa11.92□□□□□ -0.5
DHFR2-203ENST00000461173 DIAPH3Q9NSV4 1193 aa11.92□□□□□ -0.5
DHFR2-203ENST00000461173 SNX14Q9Y5W7 946 aa11.92□□□□□ -0.5
DHFR2-203ENST00000461173 PRAMEF22A3QJZ6 481 aa11.91□□□□□ -0.5
DHFR2-203ENST00000461173 PKP1Q13835 747 aa11.91□□□□□ -0.5
DHFR2-203ENST00000461173 RABL6Q3YEC7 729 aaPredicted RBP11.91□□□□□ -0.5
DHFR2-203ENST00000461173 TTC5Q8N0Z6 440 aa11.91□□□□□ -0.5
DHFR2-203ENST00000461173 NFATC2IPQ8NCF5 419 aa11.91□□□□□ -0.5
DHFR2-203ENST00000461173 BICC1Q9H694 974 aaKnown RBP11.91□□□□□ -0.5
DHFR2-203ENST00000461173 PODXL2Q9NZ53 605 aa11.91□□□□□ -0.5
DHFR2-203ENST00000461173 WDR33Q9C0J8 1336 aaKnown RBP11.91□□□□□ -0.5
DHFR2-203ENST00000461173 CYP27B1O15528 508 aa11.9□□□□□ -0.5
DHFR2-203ENST00000461173 SASH1O94885 1247 aa11.9□□□□□ -0.5
DHFR2-203ENST00000461173 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
DHFR2-203ENST00000461173 GAS2L3Q86XJ1 694 aa11.9□□□□□ -0.5
DHFR2-203ENST00000461173 ZNF496Q96IT1 587 aaPredicted RBP11.9□□□□□ -0.5
DHFR2-203ENST00000461173 LAMB4A4D0S4 1761 aa11.9□□□□□ -0.5
DHFR2-203ENST00000461173 AACSQ86V21 672 aa11.9□□□□□ -0.5
DHFR2-203ENST00000461173 XAGE3Q8WTP9 111 aa11.9□□□□□ -0.5
DHFR2-203ENST00000461173 ZSCAN31Q96LW9 406 aaPredicted RBP11.9□□□□□ -0.5
DHFR2-203ENST00000461173 LIMCH1Q9UPQ0 1083 aa11.9□□□□□ -0.5
DHFR2-203ENST00000461173 CSB-PGBD3P0DP91 1061 aa11.89□□□□□ -0.51
DHFR2-203ENST00000461173 SLC39A6Q13433 755 aa11.89□□□□□ -0.51
DHFR2-203ENST00000461173 VPS53Q5VIR6 699 aa11.89□□□□□ -0.51
DHFR2-203ENST00000461173 COPS6Q7L5N1 327 aa11.89□□□□□ -0.51
DHFR2-203ENST00000461173 PANK2Q9BZ23 570 aa11.89□□□□□ -0.51
DHFR2-203ENST00000461173 SH2B1Q9NRF2 756 aaPredicted RBP11.89□□□□□ -0.51
DHFR2-203ENST00000461173 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.89□□□□□ -0.51
DHFR2-203ENST00000461173 GLI3P10071 1580 aa11.89□□□□□ -0.51
DHFR2-203ENST00000461173 JCADQ9P266 1359 aa11.89□□□□□ -0.51
DHFR2-203ENST00000461173 ERVV-2B6SEH9 535 aa11.88□□□□□ -0.51
DHFR2-203ENST00000461173 CCDC173Q0VFZ6 552 aa11.88□□□□□ -0.51
DHFR2-203ENST00000461173 NECTIN1Q15223 517 aa11.88□□□□□ -0.51
DHFR2-203ENST00000461173 NKX1-1Q15270 411 aaPredicted RBP11.88□□□□□ -0.51
DHFR2-203ENST00000461173 TPRNQ4KMQ1 711 aa11.88□□□□□ -0.51
DHFR2-203ENST00000461173 CWC27Q6UX04 472 aaKnown RBP11.88□□□□□ -0.51
DHFR2-203ENST00000461173 TMEM87AQ8NBN3 555 aa11.88□□□□□ -0.51
DHFR2-203ENST00000461173 PLBD2Q8NHP8 589 aa11.88□□□□□ -0.51
DHFR2-203ENST00000461173 EAF2Q96CJ1 260 aaPredicted RBP11.88□□□□□ -0.51
DHFR2-203ENST00000461173 PPP1R9BQ96SB3 815 aa11.88□□□□□ -0.51
DHFR2-203ENST00000461173 ALDH8A1Q9H2A2 487 aaPredicted RBP11.88□□□□□ -0.51
DHFR2-203ENST00000461173 ZSWIM6Q9HCJ5 1215 aa11.88□□□□□ -0.51
DHFR2-203ENST00000461173 PA2G4Q9UQ80 394 aaKnown RBP11.88□□□□□ -0.51
DHFR2-203ENST00000461173 CCDC171Q6TFL3 1326 aa11.88□□□□□ -0.51
DHFR2-203ENST00000461173 AIMP1Q12904 312 aaKnown RBP11.88□□□□□ -0.51
DHFR2-203ENST00000461173 ZSCAN23Q3MJ62 389 aa11.88□□□□□ -0.51
DHFR2-203ENST00000461173 TSGA10IPQ3SY00 556 aa11.88□□□□□ -0.51
DHFR2-203ENST00000461173 MAP4K1Q92918 833 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms