RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 HOXB4P17483 251 aaPredicted RBP7.44□□□□□ -1.22
SPTLC1-203ENST00000461132 PSMA6P60900 246 aaKnown RBP7.44□□□□□ -1.22
SPTLC1-203ENST00000461132 PRRT3Q5FWE3 981 aa7.44□□□□□ -1.22
SPTLC1-203ENST00000461132 ZNF295-AS1Q8N0V1 137 aa7.44□□□□□ -1.22
SPTLC1-203ENST00000461132 USP17L3A6NCW0 530 aa7.43□□□□□ -1.22
SPTLC1-203ENST00000461132 USP17L4A6NCW7 530 aa7.43□□□□□ -1.22
SPTLC1-203ENST00000461132 SPATA31C1P0DKV0 1188 aa7.43□□□□□ -1.22
SPTLC1-203ENST00000461132 TMEM132AQ24JP5 1023 aa7.43□□□□□ -1.22
SPTLC1-203ENST00000461132 CCDC102BQ68D86 513 aa7.43□□□□□ -1.22
SPTLC1-203ENST00000461132 USP17L2Q6R6M4 530 aa7.43□□□□□ -1.22
SPTLC1-203ENST00000461132 USP17L1Q7RTZ2 530 aa7.43□□□□□ -1.22
SPTLC1-203ENST00000461132 ZDHHC1Q8WTX9 485 aa7.43□□□□□ -1.22
SPTLC1-203ENST00000461132 POM121Q96HA1 1249 aa7.43□□□□□ -1.22
SPTLC1-203ENST00000461132 PLVAPQ9BX97 442 aa7.43□□□□□ -1.22
SPTLC1-203ENST00000461132 KLF15Q9UIH9 416 aa7.43□□□□□ -1.22
SPTLC1-203ENST00000461132 EML1O00423 815 aa7.42□□□□□ -1.22
SPTLC1-203ENST00000461132 EFSO43281 561 aa7.42□□□□□ -1.22
SPTLC1-203ENST00000461132 APBA3O96018 575 aa7.42□□□□□ -1.22
SPTLC1-203ENST00000461132 CD163Q86VB7 1156 aa7.42□□□□□ -1.22
SPTLC1-203ENST00000461132 PLEKHM2Q8IWE5 1019 aa7.42□□□□□ -1.22
SPTLC1-203ENST00000461132 CEP63Q96MT8 703 aa7.42□□□□□ -1.22
SPTLC1-203ENST00000461132 STRN4Q9NRL3 753 aa7.42□□□□□ -1.22
SPTLC1-203ENST00000461132 PALM3A6NDB9 673 aaPredicted RBP7.41□□□□□ -1.22
SPTLC1-203ENST00000461132 SIN3BO75182 1162 aa7.41□□□□□ -1.22
SPTLC1-203ENST00000461132 HDGFL1Q5TGJ6 251 aa7.41□□□□□ -1.22
SPTLC1-203ENST00000461132 ATP9BO43861 1147 aa7.4□□□□□ -1.22
SPTLC1-203ENST00000461132 CHRNA4P43681 627 aa7.4□□□□□ -1.22
SPTLC1-203ENST00000461132 GATA4P43694 442 aa7.4□□□□□ -1.22
SPTLC1-203ENST00000461132 HIF1AQ16665 826 aa7.4□□□□□ -1.22
SPTLC1-203ENST00000461132 C1orf53Q5VUE5 145 aa7.4□□□□□ -1.22
SPTLC1-203ENST00000461132 LARGE2Q8N3Y3 721 aa7.4□□□□□ -1.22
SPTLC1-203ENST00000461132 OGFOD1Q8N543 542 aa7.4□□□□□ -1.22
SPTLC1-203ENST00000461132 BRD7Q9NPI1 651 aa7.4□□□□□ -1.22
SPTLC1-203ENST00000461132 HCN4Q9Y3Q4 1203 aa7.4□□□□□ -1.22
SPTLC1-203ENST00000461132 POM121CA8CG34 1229 aa7.39□□□□□ -1.23
SPTLC1-203ENST00000461132 PPP1R12BO60237 982 aaPredicted RBP7.39□□□□□ -1.23
SPTLC1-203ENST00000461132 EPHA4P54764 986 aa7.39□□□□□ -1.23
SPTLC1-203ENST00000461132 SPEM2Q0P670 501 aa7.39□□□□□ -1.23
SPTLC1-203ENST00000461132 TSPAN10Q9H1Z9 355 aaPredicted RBP7.39□□□□□ -1.23
SPTLC1-203ENST00000461132 MKRN1Q9UHC7 482 aaKnown RBP7.39□□□□□ -1.23
SPTLC1-203ENST00000461132 SFI1A8K8P3 1242 aa7.38□□□□□ -1.23
SPTLC1-203ENST00000461132 M0R082 166 aa7.38□□□□□ -1.23
SPTLC1-203ENST00000461132 SFSWAPQ12872 951 aaKnown RBP7.38□□□□□ -1.23
SPTLC1-203ENST00000461132 ZNF417Q8TAU3 575 aa7.38□□□□□ -1.23
SPTLC1-203ENST00000461132 TRIM11Q96F44 468 aa7.38□□□□□ -1.23
SPTLC1-203ENST00000461132 ZNF594Q96JF6 807 aaPredicted RBP7.38□□□□□ -1.23
SPTLC1-203ENST00000461132 ZNF587Q96SQ5 575 aaPredicted RBP7.38□□□□□ -1.23
SPTLC1-203ENST00000461132 PHACTR1Q9C0D0 580 aa7.38□□□□□ -1.23
SPTLC1-203ENST00000461132 HCN2Q9UL51 889 aa7.38□□□□□ -1.23
SPTLC1-203ENST00000461132 KIAA1024Q9UPX6 916 aa7.38□□□□□ -1.23
SPTLC1-203ENST00000461132 ADARB2-AS1A8MUL3 147 aa7.37□□□□□ -1.23
SPTLC1-203ENST00000461132 M0R2N6 131 aa7.37□□□□□ -1.23
SPTLC1-203ENST00000461132 CLDN10P78369 228 aa7.37□□□□□ -1.23
SPTLC1-203ENST00000461132 TBC1D8BQ0IIM8 1120 aa7.37□□□□□ -1.23
SPTLC1-203ENST00000461132 TRIM28Q13263 835 aaKnown RBP7.37□□□□□ -1.23
SPTLC1-203ENST00000461132 DOC2BQ14184 412 aa7.37□□□□□ -1.23
SPTLC1-203ENST00000461132 SH3PXD2AQ5TCZ1 1133 aa7.37□□□□□ -1.23
SPTLC1-203ENST00000461132 TNFRSF25Q93038 417 aa7.37□□□□□ -1.23
SPTLC1-203ENST00000461132 NACC1Q96RE7 527 aa7.37□□□□□ -1.23
SPTLC1-203ENST00000461132 KCNH4Q9UQ05 1017 aa7.37□□□□□ -1.23
SPTLC1-203ENST00000461132 ZBTB7BO15156 539 aaPredicted RBP7.36□□□□□ -1.23
SPTLC1-203ENST00000461132 ADH7P40394 386 aa7.36□□□□□ -1.23
SPTLC1-203ENST00000461132 RAB44Q7Z6P3 723 aaPredicted RBP7.36□□□□□ -1.23
SPTLC1-203ENST00000461132 TSEN2Q8NCE0 465 aaKnown RBP7.36□□□□□ -1.23
SPTLC1-203ENST00000461132 CHMP7Q8WUX9 453 aaPredicted RBP7.36□□□□□ -1.23
SPTLC1-203ENST00000461132 HSH2DQ96JZ2 352 aa7.36□□□□□ -1.23
SPTLC1-203ENST00000461132 SLC30A3Q99726 388 aa7.36□□□□□ -1.23
SPTLC1-203ENST00000461132 SEMA6BQ9H3T3 888 aa7.36□□□□□ -1.23
SPTLC1-203ENST00000461132 RASA1P20936 1047 aa7.35□□□□□ -1.23
SPTLC1-203ENST00000461132 HIRAP54198 1017 aaPredicted RBP7.35□□□□□ -1.23
SPTLC1-203ENST00000461132 LARP1Q6PKG0 1096 aaKnown RBP7.35□□□□□ -1.23
SPTLC1-203ENST00000461132 SIX5Q8N196 739 aa7.35□□□□□ -1.23
SPTLC1-203ENST00000461132 BHMTQ93088 406 aa7.35□□□□□ -1.23
SPTLC1-203ENST00000461132 NGLY1Q96IV0 654 aa7.35□□□□□ -1.23
SPTLC1-203ENST00000461132 SUSD3Q96L08 255 aa7.35□□□□□ -1.23
SPTLC1-203ENST00000461132 PNMA5Q96PV4 448 aa7.35□□□□□ -1.23
SPTLC1-203ENST00000461132 UBE2OQ9C0C9 1292 aaKnown RBP7.35□□□□□ -1.23
SPTLC1-203ENST00000461132 IGFLR1Q9H665 355 aa7.35□□□□□ -1.23
SPTLC1-203ENST00000461132 SEC13P55735 322 aa7.34□□□□□ -1.23
SPTLC1-203ENST00000461132 XP32Q5T750 250 aa7.34□□□□□ -1.23
SPTLC1-203ENST00000461132 ALDH16A1Q8IZ83 802 aa7.34□□□□□ -1.23
SPTLC1-203ENST00000461132 UCN2Q96RP3 112 aa7.34□□□□□ -1.23
SPTLC1-203ENST00000461132 HINFPQ9BQA5 517 aa7.34□□□□□ -1.23
SPTLC1-203ENST00000461132 LILRB5O75023 590 aa7.33□□□□□ -1.24
SPTLC1-203ENST00000461132 TYRO3Q06418 890 aa7.33□□□□□ -1.24
SPTLC1-203ENST00000461132 TRAPPC3LQ5T215 181 aa7.33□□□□□ -1.24
SPTLC1-203ENST00000461132 GAS2L2Q8NHY3 880 aa7.33□□□□□ -1.24
SPTLC1-203ENST00000461132 ADAMTS19Q8TE59 1207 aa7.33□□□□□ -1.24
SPTLC1-203ENST00000461132 SCG3Q8WXD2 468 aaKnown RBP7.33□□□□□ -1.24
SPTLC1-203ENST00000461132 ATAD2Q6PL18 1390 aa7.33□□□□□ -1.24
SPTLC1-203ENST00000461132 ALBP02768 609 aa7.32□□□□□ -1.24
SPTLC1-203ENST00000461132 EPB42P16452 691 aa7.32□□□□□ -1.24
SPTLC1-203ENST00000461132 MICALL1Q8N3F8 863 aa7.32□□□□□ -1.24
SPTLC1-203ENST00000461132 Q8N3U1 123 aa7.32□□□□□ -1.24
SPTLC1-203ENST00000461132 GLMNQ92990 594 aa7.32□□□□□ -1.24
SPTLC1-203ENST00000461132 PRDM6Q9NQX0 595 aa7.32□□□□□ -1.24
SPTLC1-203ENST00000461132 FAM229AH3BQW9 127 aa7.31□□□□□ -1.24
SPTLC1-203ENST00000461132 KCNQ4P56696 695 aa7.31□□□□□ -1.24
SPTLC1-203ENST00000461132 BTLAQ7Z6A9 289 aa7.31□□□□□ -1.24
SPTLC1-203ENST00000461132 PROSER2Q86WR7 435 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms