RNA–Protein interactions for RNA: ENST00000460838.5

CCDC66-210, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 744 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-210ENST00000460838 LRRC4BQ9NT99 713 aa12.51□□□□□ -0.41
CCDC66-210ENST00000460838 KCPQ6ZWJ8 1503 aa12.51□□□□□ -0.41
CCDC66-210ENST00000460838 PTCD2Q8WV60 388 aaKnown RBP12.5□□□□□ -0.41
CCDC66-210ENST00000460838 EMILIN3Q9NT22 766 aa12.5□□□□□ -0.41
CCDC66-210ENST00000460838 PCDHGA4Q9Y5G9 962 aa12.5□□□□□ -0.41
CCDC66-210ENST00000460838 CICQ96RK0 1608 aaPredicted RBP12.5□□□□□ -0.41
CCDC66-210ENST00000460838 ZNF831Q5JPB2 1677 aa12.5□□□□□ -0.41
CCDC66-210ENST00000460838 C5P01031 1676 aa12.49□□□□□ -0.41
CCDC66-210ENST00000460838 KCNQ4P56696 695 aa12.49□□□□□ -0.41
CCDC66-210ENST00000460838 TEFQ10587 303 aa12.49□□□□□ -0.41
CCDC66-210ENST00000460838 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
CCDC66-210ENST00000460838 ARSIQ5FYB1 569 aa12.49□□□□□ -0.41
CCDC66-210ENST00000460838 OXER1Q8TDS5 423 aa12.49□□□□□ -0.41
CCDC66-210ENST00000460838 SMARCC1Q92922 1105 aaPredicted RBP12.49□□□□□ -0.41
CCDC66-210ENST00000460838 SLC4A9Q96Q91 983 aa12.49□□□□□ -0.41
CCDC66-210ENST00000460838 KDM3BQ7LBC6 1761 aa12.48□□□□□ -0.41
CCDC66-210ENST00000460838 TJP1Q07157 1748 aa12.48□□□□□ -0.41
CCDC66-210ENST00000460838 SENP3-EIF4A1A0A087X0R7 540 aa12.48□□□□□ -0.41
CCDC66-210ENST00000460838 DPYSL4O14531 572 aa12.48□□□□□ -0.41
CCDC66-210ENST00000460838 SLC39A6Q13433 755 aa12.48□□□□□ -0.41
CCDC66-210ENST00000460838 SLC27A3Q5K4L6 730 aa12.48□□□□□ -0.41
CCDC66-210ENST00000460838 KCNV2Q8TDN2 545 aa12.48□□□□□ -0.41
CCDC66-210ENST00000460838 TAF1LQ8IZX4 1826 aa12.48□□□□□ -0.41
CCDC66-210ENST00000460838 LOC102724428A0A0B4J2F2 783 aa12.47□□□□□ -0.41
CCDC66-210ENST00000460838 SIK1P57059 783 aa12.47□□□□□ -0.41
CCDC66-210ENST00000460838 LMOD3Q0VAK6 560 aa12.47□□□□□ -0.41
CCDC66-210ENST00000460838 ANO8Q9HCE9 1232 aaPredicted RBP12.47□□□□□ -0.41
CCDC66-210ENST00000460838 CCNL1Q9UK58 526 aaPredicted RBP12.47□□□□□ -0.41
CCDC66-210ENST00000460838 COL5A3P25940 1745 aaPredicted RBP12.47□□□□□ -0.41
CCDC66-210ENST00000460838 KCNQ3O43525 872 aa12.46□□□□□ -0.41
CCDC66-210ENST00000460838 ST18O60284 1047 aa12.46□□□□□ -0.41
CCDC66-210ENST00000460838 ITPK1Q13572 414 aa12.46□□□□□ -0.41
CCDC66-210ENST00000460838 ZNF790Q6PG37 636 aa12.46□□□□□ -0.41
CCDC66-210ENST00000460838 BTBD11A6QL63 1104 aa12.45□□□□□ -0.42
CCDC66-210ENST00000460838 PTCD1O75127 700 aaKnown RBP12.45□□□□□ -0.42
CCDC66-210ENST00000460838 TAF7Q15545 349 aaPredicted RBP12.45□□□□□ -0.42
CCDC66-210ENST00000460838 ARHGEF1Q92888 912 aaKnown RBP12.45□□□□□ -0.42
CCDC66-210ENST00000460838 MIS18AQ9NYP9 233 aa12.45□□□□□ -0.42
CCDC66-210ENST00000460838 C4BP0C0L5 1744 aa12.45□□□□□ -0.42
CCDC66-210ENST00000460838 ZNF827Q17R98 1081 aa12.44□□□□□ -0.42
CCDC66-210ENST00000460838 CCDC27Q2M243 656 aa12.44□□□□□ -0.42
CCDC66-210ENST00000460838 LINC00116Q8NCU8 138 aa12.44□□□□□ -0.42
CCDC66-210ENST00000460838 KHSRPQ92945 711 aaKnown RBP eCLIP12.44□□□□□ -0.428e-6■■■□□ 18.5
CCDC66-210ENST00000460838 ZNF496Q96IT1 587 aaPredicted RBP12.44□□□□□ -0.42
CCDC66-210ENST00000460838 TUBGCP6Q96RT7 1819 aa12.44□□□□□ -0.42
CCDC66-210ENST00000460838 NUDT7P0C024 238 aa12.43□□□□□ -0.42
CCDC66-210ENST00000460838 HOXB1P14653 301 aaPredicted RBP12.43□□□□□ -0.42
CCDC66-210ENST00000460838 ATP6V1AP38606 617 aa12.43□□□□□ -0.42
CCDC66-210ENST00000460838 GPR153Q6NV75 609 aa12.43□□□□□ -0.42
CCDC66-210ENST00000460838 WWC1Q8IX03 1113 aa12.43□□□□□ -0.42
CCDC66-210ENST00000460838 HEG1Q9ULI3 1381 aa12.43□□□□□ -0.42
CCDC66-210ENST00000460838 TTC5Q8N0Z6 440 aa12.42□□□□□ -0.42
CCDC66-210ENST00000460838 CHL1O00533 1208 aa12.41□□□□□ -0.42
CCDC66-210ENST00000460838 EVI5O60447 810 aa12.41□□□□□ -0.42
CCDC66-210ENST00000460838 ZNF853P0CG23 659 aa12.41□□□□□ -0.42
CCDC66-210ENST00000460838 SLC15A2Q16348 729 aa12.41□□□□□ -0.42
CCDC66-210ENST00000460838 QSER1Q2KHR3 1735 aa12.41□□□□□ -0.42
CCDC66-210ENST00000460838 DNAJC10Q8IXB1 793 aa12.41□□□□□ -0.42
CCDC66-210ENST00000460838 BABAM1Q9NWV8 329 aa12.41□□□□□ -0.42
CCDC66-210ENST00000460838 CASZ1Q86V15 1759 aa12.41□□□□□ -0.42
CCDC66-210ENST00000460838 ZNF521Q96K83 1311 aa12.4□□□□□ -0.42
CCDC66-210ENST00000460838 UBR3Q6ZT12 1888 aa12.4□□□□□ -0.42
CCDC66-210ENST00000460838 MYH14Q7Z406 1995 aaKnown RBP12.4□□□□□ -0.42
CCDC66-210ENST00000460838 PSDA5PKW4 1024 aaPredicted RBP12.4□□□□□ -0.42
CCDC66-210ENST00000460838 EIF4A1P60842 406 aaKnown RBP12.4□□□□□ -0.42
CCDC66-210ENST00000460838 R3HDM1Q15032 1099 aaKnown RBP12.4□□□□□ -0.42
CCDC66-210ENST00000460838 NBPF14Q5TI25 921 aa12.4□□□□□ -0.42
CCDC66-210ENST00000460838 AMIGO3Q86WK7 504 aa12.4□□□□□ -0.42
CCDC66-210ENST00000460838 FMNL2Q96PY5 1086 aa12.4□□□□□ -0.42
CCDC66-210ENST00000460838 STK32BQ9NY57 414 aa12.4□□□□□ -0.42
CCDC66-210ENST00000460838 TSPYL4Q9UJ04 414 aa12.4□□□□□ -0.42
CCDC66-210ENST00000460838 SALL2Q9Y467 1007 aaPredicted RBP12.4□□□□□ -0.42
CCDC66-210ENST00000460838 LAMB4A4D0S4 1761 aa12.4□□□□□ -0.42
CCDC66-210ENST00000460838 CNTNAP4Q9C0A0 1308 aa12.39□□□□□ -0.43
CCDC66-210ENST00000460838 PRAMEF22A3QJZ6 481 aa12.39□□□□□ -0.43
CCDC66-210ENST00000460838 CYP19A1P11511 503 aaPredicted RBP12.39□□□□□ -0.43
CCDC66-210ENST00000460838 EMP3P54852 163 aa12.39□□□□□ -0.43
CCDC66-210ENST00000460838 NGEFQ8N5V2 710 aa12.39□□□□□ -0.43
CCDC66-210ENST00000460838 IFT57Q9NWB7 429 aa12.39□□□□□ -0.43
CCDC66-210ENST00000460838 ARIH1Q9Y4X5 557 aaPredicted RBP12.39□□□□□ -0.43
CCDC66-210ENST00000460838 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
CCDC66-210ENST00000460838 SPDYE16A6NNV3 312 aaPredicted RBP12.38□□□□□ -0.43
CCDC66-210ENST00000460838 CALD1Q05682 793 aaKnown RBP12.38□□□□□ -0.43
CCDC66-210ENST00000460838 INTS5Q6P9B9 1019 aaKnown RBP12.38□□□□□ -0.43
CCDC66-210ENST00000460838 MARVELD3Q96A59 401 aa12.38□□□□□ -0.43
CCDC66-210ENST00000460838 PDGFDQ9GZP0 370 aaPredicted RBP12.38□□□□□ -0.43
CCDC66-210ENST00000460838 MBIPQ9NS73 344 aa12.38□□□□□ -0.43
CCDC66-210ENST00000460838 IL16Q14005 1332 aa12.37□□□□□ -0.43
CCDC66-210ENST00000460838 SNRPA1P09661 255 aaKnown RBP12.37□□□□□ -0.43
CCDC66-210ENST00000460838 CRKLP46109 303 aaKnown RBP12.37□□□□□ -0.43
CCDC66-210ENST00000460838 GNAI1P63096 354 aa12.37□□□□□ -0.43
CCDC66-210ENST00000460838 KRT24Q2M2I5 525 aa12.37□□□□□ -0.43
CCDC66-210ENST00000460838 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
CCDC66-210ENST00000460838 SMIM5Q71RC9 77 aa12.37□□□□□ -0.43
CCDC66-210ENST00000460838 WDR63Q8IWG1 891 aa12.37□□□□□ -0.43
CCDC66-210ENST00000460838 LAS1LQ9Y4W2 734 aaKnown RBP12.37□□□□□ -0.43
CCDC66-210ENST00000460838 GNPATO15228 680 aa12.36□□□□□ -0.43
CCDC66-210ENST00000460838 GIGYF1O75420 1035 aaPredicted RBP12.36□□□□□ -0.43
CCDC66-210ENST00000460838 AK7Q96M32 723 aa12.36□□□□□ -0.43
CCDC66-210ENST00000460838 CCDC87Q9NVE4 849 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms