RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 PRPF40BQ6NWY9 871 aaKnown RBP15.85■□□□□ 0.13
PCYT1A-213ENST00000460827 WBP1LQ9NX94 342 aa15.85■□□□□ 0.13
PCYT1A-213ENST00000460827 TBC1D2BQ9UPU7 963 aa15.85■□□□□ 0.13
PCYT1A-213ENST00000460827 IQCA1LA6NCM1 817 aa15.84■□□□□ 0.13
PCYT1A-213ENST00000460827 TMEM88BA6NKF7 163 aa15.84■□□□□ 0.13
PCYT1A-213ENST00000460827 HMOX1P09601 288 aa15.84■□□□□ 0.13
PCYT1A-213ENST00000460827 STYK1Q6J9G0 422 aa15.84■□□□□ 0.13
PCYT1A-213ENST00000460827 CNKSR1Q969H4 720 aa15.84■□□□□ 0.13
PCYT1A-213ENST00000460827 ADAMTSL1Q8N6G6 1762 aa15.84■□□□□ 0.13
PCYT1A-213ENST00000460827 LBX1P52954 281 aa15.83■□□□□ 0.12
PCYT1A-213ENST00000460827 C7orf43Q8WVR3 580 aa15.83■□□□□ 0.12
PCYT1A-213ENST00000460827 AIDAQ96BJ3 306 aa15.83■□□□□ 0.12
PCYT1A-213ENST00000460827 ZNF496Q96IT1 587 aaPredicted RBP15.83■□□□□ 0.12
PCYT1A-213ENST00000460827 SIPA1L3O60292 1781 aaPredicted RBP15.82■□□□□ 0.12
PCYT1A-213ENST00000460827 SOGA3Q5TF21 947 aa15.82■□□□□ 0.12
PCYT1A-213ENST00000460827 CNBD1Q8NA66 436 aa15.82■□□□□ 0.12
PCYT1A-213ENST00000460827 TIMELESSQ9UNS1 1208 aa15.82■□□□□ 0.12
PCYT1A-213ENST00000460827 HEG1Q9ULI3 1381 aa15.82■□□□□ 0.12
PCYT1A-213ENST00000460827 BCORQ6W2J9 1755 aa15.82■□□□□ 0.12
PCYT1A-213ENST00000460827 CAMTA2O94983 1202 aa15.81■□□□□ 0.12
PCYT1A-213ENST00000460827 IL6STP40189 918 aaPredicted RBP15.81■□□□□ 0.12
PCYT1A-213ENST00000460827 TTC5Q8N0Z6 440 aa15.81■□□□□ 0.12
PCYT1A-213ENST00000460827 MASTLQ96GX5 879 aa15.81■□□□□ 0.12
PCYT1A-213ENST00000460827 SETDB2Q96T68 719 aa15.81■□□□□ 0.12
PCYT1A-213ENST00000460827 ZNF541Q9H0D2 1346 aa15.81■□□□□ 0.12
PCYT1A-213ENST00000460827 PDE4DIPQ5VU43 2346 aa15.8■□□□□ 0.12
PCYT1A-213ENST00000460827 HSPA8P11142 646 aaKnown RBP15.8■□□□□ 0.12
PCYT1A-213ENST00000460827 AMER1Q5JTC6 1135 aaPredicted RBP15.8■□□□□ 0.12
PCYT1A-213ENST00000460827 ZNF790Q6PG37 636 aa15.8■□□□□ 0.12
PCYT1A-213ENST00000460827 ABHD8Q96I13 439 aa15.8■□□□□ 0.12
PCYT1A-213ENST00000460827 ZNF330Q9Y3S2 320 aaPredicted RBP15.8■□□□□ 0.12
PCYT1A-213ENST00000460827 RASSF10A6NK89 507 aa15.79■□□□□ 0.12
PCYT1A-213ENST00000460827 A1BGP04217 495 aa15.79■□□□□ 0.12
PCYT1A-213ENST00000460827 HSPA5P11021 654 aaKnown RBP15.79■□□□□ 0.12
PCYT1A-213ENST00000460827 EAPPQ56P03 285 aaPredicted RBP15.79■□□□□ 0.12
PCYT1A-213ENST00000460827 TEX13AQ9BXU3 409 aaPredicted RBP15.79■□□□□ 0.12
PCYT1A-213ENST00000460827 KNSTRNQ9Y448 316 aa15.79■□□□□ 0.12
PCYT1A-213ENST00000460827 ST5P78524 1137 aa15.78■□□□□ 0.12
PCYT1A-213ENST00000460827 FAM161AQ3B820 660 aa15.78■□□□□ 0.12
PCYT1A-213ENST00000460827 CCDC93Q567U6 631 aa15.78■□□□□ 0.12
PCYT1A-213ENST00000460827 IL17REQ8NFR9 667 aa15.78■□□□□ 0.12
PCYT1A-213ENST00000460827 HACL1Q9UJ83 578 aa15.78■□□□□ 0.12
PCYT1A-213ENST00000460827 NPHP1O15259 732 aa15.77■□□□□ 0.12
PCYT1A-213ENST00000460827 EPHX2P34913 555 aa15.77■□□□□ 0.12
PCYT1A-213ENST00000460827 EIF4G2P78344 907 aaKnown RBP eCLIP15.77■□□□□ 0.12
PCYT1A-213ENST00000460827 FKBP4Q02790 459 aaKnown RBP eCLIP15.77■□□□□ 0.12
PCYT1A-213ENST00000460827 DEFB115Q30KQ5 88 aa15.77■□□□□ 0.12
PCYT1A-213ENST00000460827 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.12
PCYT1A-213ENST00000460827 OLFM4Q6UX06 510 aa15.77■□□□□ 0.12
PCYT1A-213ENST00000460827 ZNF277Q9NRM2 450 aaPredicted RBP15.77■□□□□ 0.12
PCYT1A-213ENST00000460827 FOXD4L1Q9NU39 408 aa15.77■□□□□ 0.12
PCYT1A-213ENST00000460827 KLRG2A4D1S0 409 aaPredicted RBP15.76■□□□□ 0.11
PCYT1A-213ENST00000460827 MAP1SQ66K74 1059 aaPredicted RBP15.76■□□□□ 0.11
PCYT1A-213ENST00000460827 CNTROBQ8N137 903 aa15.76■□□□□ 0.11
PCYT1A-213ENST00000460827 CLEC11AQ9Y240 323 aa15.76■□□□□ 0.11
PCYT1A-213ENST00000460827 WDR33Q9C0J8 1336 aaKnown RBP15.75■□□□□ 0.11
PCYT1A-213ENST00000460827 NPR1P16066 1061 aa15.75■□□□□ 0.11
PCYT1A-213ENST00000460827 TEFQ10587 303 aa15.75■□□□□ 0.11
PCYT1A-213ENST00000460827 DZIP3Q86Y13 1208 aaKnown RBP15.75■□□□□ 0.11
PCYT1A-213ENST00000460827 THSD7BQ9C0I4 1608 aa15.75■□□□□ 0.11
PCYT1A-213ENST00000460827 RNF123Q5XPI4 1314 aa15.74■□□□□ 0.11
PCYT1A-213ENST00000460827 FZD9O00144 591 aa15.74■□□□□ 0.11
PCYT1A-213ENST00000460827 KCNQ3O43525 872 aa15.74■□□□□ 0.11
PCYT1A-213ENST00000460827 DIAPH1O60610 1272 aaKnown RBP15.74■□□□□ 0.11
PCYT1A-213ENST00000460827 MAP2K1Q02750 393 aaPredicted RBP15.74■□□□□ 0.11
PCYT1A-213ENST00000460827 PNMA8AQ86V59 439 aaPredicted RBP15.74■□□□□ 0.11
PCYT1A-213ENST00000460827 NBPF5PQ86XG9 351 aaPredicted RBP15.74■□□□□ 0.11
PCYT1A-213ENST00000460827 FMNL2Q96PY5 1086 aa15.74■□□□□ 0.11
PCYT1A-213ENST00000460827 GNAT3A8MTJ3 354 aa15.73■□□□□ 0.11
PCYT1A-213ENST00000460827 CLEC4GQ6UXB4 293 aa15.73■□□□□ 0.11
PCYT1A-213ENST00000460827 SNED1Q8TER0 1413 aa15.73■□□□□ 0.11
PCYT1A-213ENST00000460827 CEMIPQ8WUJ3 1361 aa15.73■□□□□ 0.11
PCYT1A-213ENST00000460827 TRPM7Q96QT4 1865 aa15.72■□□□□ 0.11
PCYT1A-213ENST00000460827 LTBP1Q14766 1721 aa15.72■□□□□ 0.11
PCYT1A-213ENST00000460827 PIP4K2AP48426 406 aaPredicted RBP15.72■□□□□ 0.11
PCYT1A-213ENST00000460827 NPM2Q86SE8 214 aaKnown RBP15.72■□□□□ 0.11
PCYT1A-213ENST00000460827 RTKN2Q8IZC4 609 aa15.72■□□□□ 0.11
PCYT1A-213ENST00000460827 USP16Q9Y5T5 823 aa15.72■□□□□ 0.11
PCYT1A-213ENST00000460827 COL3A1P02461 1466 aaPredicted RBP15.71■□□□□ 0.11
PCYT1A-213ENST00000460827 COL4A5P29400 1685 aa15.71■□□□□ 0.11
PCYT1A-213ENST00000460827 IARSP41252 1262 aaKnown RBP15.71■□□□□ 0.11
PCYT1A-213ENST00000460827 RGS19P49795 217 aa15.71■□□□□ 0.11
PCYT1A-213ENST00000460827 GPC2Q8N158 579 aa15.71■□□□□ 0.11
PCYT1A-213ENST00000460827 GAS2L2Q8NHY3 880 aa15.71■□□□□ 0.11
PCYT1A-213ENST00000460827 DDX21Q9NR30 783 aaKnown RBP eCLIP15.71■□□□□ 0.11
PCYT1A-213ENST00000460827 ABT1Q9ULW3 272 aaKnown RBP15.71■□□□□ 0.11
PCYT1A-213ENST00000460827 PRAMEF22A3QJZ6 481 aa15.7■□□□□ 0.1
PCYT1A-213ENST00000460827 FMR1Q06787 632 aaKnown RBP eCLIP15.7■□□□□ 0.1
PCYT1A-213ENST00000460827 SYNE4Q8N205 404 aa15.7■□□□□ 0.1
PCYT1A-213ENST00000460827 CAPNS2Q96L46 248 aa15.69■□□□□ 0.1
PCYT1A-213ENST00000460827 CASP8AP2Q9UKL3 1982 aa15.69■□□□□ 0.1
PCYT1A-213ENST00000460827 MLLT1Q03111 559 aaPredicted RBP15.68■□□□□ 0.1
PCYT1A-213ENST00000460827 TPTE2Q6XPS3 522 aa15.68■□□□□ 0.1
PCYT1A-213ENST00000460827 PSMD1Q99460 953 aa15.68■□□□□ 0.1
PCYT1A-213ENST00000460827 NIP7Q9Y221 180 aaKnown RBP eCLIP15.68■□□□□ 0.1
PCYT1A-213ENST00000460827 ZNF652Q9Y2D9 606 aa15.68■□□□□ 0.1
PCYT1A-213ENST00000460827 CCDC85CA6NKD9 419 aa15.67■□□□□ 0.1
PCYT1A-213ENST00000460827 BTBD11A6QL63 1104 aa15.67■□□□□ 0.1
PCYT1A-213ENST00000460827 NBPF26B4DH59 902 aa15.67■□□□□ 0.1
PCYT1A-213ENST00000460827 RGL2O15211 777 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms