RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 AIMP1Q12904 312 aaKnown RBP18.04■□□□□ 0.48
HDLBP-229ENST00000460826 HLFQ16534 295 aa18.04■□□□□ 0.48
HDLBP-229ENST00000460826 COPS6Q7L5N1 327 aa18.04■□□□□ 0.48
HDLBP-229ENST00000460826 NLGN1Q8N2Q7 840 aa18.04■□□□□ 0.48
HDLBP-229ENST00000460826 MAP3K15Q6ZN16 1313 aa18.03■□□□□ 0.48
HDLBP-229ENST00000460826 MMP10P09238 476 aa18.03■□□□□ 0.48
HDLBP-229ENST00000460826 ZBTB3Q9H5J0 574 aa18.03■□□□□ 0.48
HDLBP-229ENST00000460826 PHAXQ9H814 394 aaKnown RBP18.03■□□□□ 0.48
HDLBP-229ENST00000460826 ANKRD36CQ5JPF3 1778 aa18.02■□□□□ 0.48
HDLBP-229ENST00000460826 ARFGEF2Q9Y6D5 1785 aa18.02■□□□□ 0.48
HDLBP-229ENST00000460826 POLD1P28340 1107 aa18.02■□□□□ 0.48
HDLBP-229ENST00000460826 TM4SF1P30408 202 aa18.02■□□□□ 0.48
HDLBP-229ENST00000460826 DDR1Q08345 913 aa18.02■□□□□ 0.48
HDLBP-229ENST00000460826 NFIXQ14938 502 aa18.02■□□□□ 0.48
HDLBP-229ENST00000460826 TBC1D9BQ66K14 1250 aa18.02■□□□□ 0.48
HDLBP-229ENST00000460826 HYPKQ9NX55 129 aa18.02■□□□□ 0.48
HDLBP-229ENST00000460826 KIF6Q6ZMV9 814 aa18.01■□□□□ 0.47
HDLBP-229ENST00000460826 G2E3Q7L622 706 aa18.01■□□□□ 0.47
HDLBP-229ENST00000460826 NRXN2Q9P2S2 1712 aa18.01■□□□□ 0.47
HDLBP-229ENST00000460826 ERVV-1B6SEH8 477 aa18■□□□□ 0.47
HDLBP-229ENST00000460826 BICDL1Q6ZP65 573 aa18■□□□□ 0.47
HDLBP-229ENST00000460826 STK31Q9BXU1 1019 aa18■□□□□ 0.47
HDLBP-229ENST00000460826 CHMP4AQ9BY43 222 aa18■□□□□ 0.47
HDLBP-229ENST00000460826 POLRMTO00411 1230 aaKnown RBP17.99■□□□□ 0.47
HDLBP-229ENST00000460826 SLC4A2P04920 1241 aa17.99■□□□□ 0.47
HDLBP-229ENST00000460826 CLEC4GQ6UXB4 293 aa17.99■□□□□ 0.47
HDLBP-229ENST00000460826 GIGYF2Q6Y7W6 1299 aaKnown RBP17.98■□□□□ 0.47
HDLBP-229ENST00000460826 YTHDC1Q96MU7 727 aaKnown RBP17.98■□□□□ 0.47
HDLBP-229ENST00000460826 PPP1R1BQ9UD71 204 aaPredicted RBP17.98■□□□□ 0.47
HDLBP-229ENST00000460826 KIF13BQ9NQT8 1826 aa17.98■□□□□ 0.47
HDLBP-229ENST00000460826 RGL2O15211 777 aa17.97■□□□□ 0.47
HDLBP-229ENST00000460826 ZNF652Q9Y2D9 606 aa17.97■□□□□ 0.47
HDLBP-229ENST00000460826 PARP3Q9Y6F1 533 aa17.97■□□□□ 0.47
HDLBP-229ENST00000460826 ATP10DQ9P241 1426 aa17.97■□□□□ 0.47
HDLBP-229ENST00000460826 ANKRD13DQ6ZTN6 518 aa17.96■□□□□ 0.47
HDLBP-229ENST00000460826 PLBD2Q8NHP8 589 aa17.96■□□□□ 0.47
HDLBP-229ENST00000460826 SSH1Q8WYL5 1049 aa17.96■□□□□ 0.47
HDLBP-229ENST00000460826 NIP7Q9Y221 180 aaKnown RBP eCLIP17.96■□□□□ 0.47
HDLBP-229ENST00000460826 ANKRD31Q8N7Z5 1873 aa17.95■□□□□ 0.46
HDLBP-229ENST00000460826 SERPINB2P05120 415 aa17.95■□□□□ 0.46
HDLBP-229ENST00000460826 GPTP24298 496 aa17.95■□□□□ 0.46
HDLBP-229ENST00000460826 FLIIQ13045 1269 aa17.95■□□□□ 0.46
HDLBP-229ENST00000460826 UBN2Q6ZU65 1347 aa17.95■□□□□ 0.46
HDLBP-229ENST00000460826 KIAA1551Q9HCM1 1747 aa17.95■□□□□ 0.46
HDLBP-229ENST00000460826 ADCY9O60503 1353 aa17.94■□□□□ 0.46
HDLBP-229ENST00000460826 CARMIL3Q8ND23 1372 aa17.94■□□□□ 0.46
HDLBP-229ENST00000460826 ZNF34Q8IZ26 560 aa17.94■□□□□ 0.46
HDLBP-229ENST00000460826 KLHL34Q8N239 644 aa17.94■□□□□ 0.46
HDLBP-229ENST00000460826 MRPL50Q8N5N7 158 aaKnown RBP17.94■□□□□ 0.46
HDLBP-229ENST00000460826 SETDB2Q96T68 719 aa17.94■□□□□ 0.46
HDLBP-229ENST00000460826 BCL2L13Q9BXK5 485 aa17.94■□□□□ 0.46
HDLBP-229ENST00000460826 FHDC1Q9C0D6 1143 aaPredicted RBP17.94■□□□□ 0.46
HDLBP-229ENST00000460826 C10orf71Q711Q0 1435 aa17.94■□□□□ 0.46
HDLBP-229ENST00000460826 CT47B1P0C2W7 299 aaPredicted RBP17.93■□□□□ 0.46
HDLBP-229ENST00000460826 N4BP2Q86UW6 1770 aaPredicted RBP17.92■□□□□ 0.46
HDLBP-229ENST00000460826 PI4KAP2A4QPH2 592 aa17.92■□□□□ 0.46
HDLBP-229ENST00000460826 FAM177BA6PVY3 158 aa17.92■□□□□ 0.46
HDLBP-229ENST00000460826 TCIRG1Q13488 830 aa17.92■□□□□ 0.46
HDLBP-229ENST00000460826 KSR2Q6VAB6 950 aa17.92■□□□□ 0.46
HDLBP-229ENST00000460826 RIC3Q7Z5B4 369 aa17.92■□□□□ 0.46
HDLBP-229ENST00000460826 CCDC24Q8N4L8 307 aa17.92■□□□□ 0.46
HDLBP-229ENST00000460826 PI4KAP1Q8N8J0 262 aa17.92■□□□□ 0.46
HDLBP-229ENST00000460826 ZNF428Q96B54 188 aa17.92■□□□□ 0.46
HDLBP-229ENST00000460826 DDX58O95786 925 aaKnown RBP17.91■□□□□ 0.46
HDLBP-229ENST00000460826 RARSP54136 660 aaKnown RBP17.91■□□□□ 0.46
HDLBP-229ENST00000460826 ALDH1L2Q3SY69 923 aa17.91■□□□□ 0.46
HDLBP-229ENST00000460826 PRR5LQ6MZQ0 368 aa17.91■□□□□ 0.46
HDLBP-229ENST00000460826 MAP3K2Q9Y2U5 619 aa17.91■□□□□ 0.46
HDLBP-229ENST00000460826 ATP5J2-PTCD1G3V325 749 aa17.9■□□□□ 0.46
HDLBP-229ENST00000460826 FKBP5Q13451 457 aaPredicted RBP17.9■□□□□ 0.46
HDLBP-229ENST00000460826 HSP90AB3PQ58FF7 597 aa17.9■□□□□ 0.46
HDLBP-229ENST00000460826 SUSD4Q5VX71 490 aa17.9■□□□□ 0.46
HDLBP-229ENST00000460826 NLGN2Q8NFZ4 835 aa17.9■□□□□ 0.46
HDLBP-229ENST00000460826 MYD88Q99836 296 aa17.9■□□□□ 0.46
HDLBP-229ENST00000460826 SYT17Q9BSW7 474 aa17.9■□□□□ 0.46
HDLBP-229ENST00000460826 ISCA1Q9BUE6 129 aa17.9■□□□□ 0.46
HDLBP-229ENST00000460826 SMC4Q9NTJ3 1288 aa17.9■□□□□ 0.46
HDLBP-229ENST00000460826 NLRP10Q86W26 655 aa17.89■□□□□ 0.45
HDLBP-229ENST00000460826 NBPF5PQ86XG9 351 aaPredicted RBP17.89■□□□□ 0.45
HDLBP-229ENST00000460826 METTL22Q9BUU2 404 aaPredicted RBP17.89■□□□□ 0.45
HDLBP-229ENST00000460826 CD2APQ9Y5K6 639 aa17.89■□□□□ 0.45
HDLBP-229ENST00000460826 TNRC6CQ9HCJ0 1690 aaKnown RBP17.88■□□□□ 0.45
HDLBP-229ENST00000460826 F6X3S4 739 aa17.88■□□□□ 0.45
HDLBP-229ENST00000460826 NTSR2O95665 410 aa17.88■□□□□ 0.45
HDLBP-229ENST00000460826 CNBD1Q8NA66 436 aa17.88■□□□□ 0.45
HDLBP-229ENST00000460826 COL11A2P13942 1736 aaPredicted RBP17.88■□□□□ 0.45
HDLBP-229ENST00000460826 BRCA1P38398 1863 aaKnown RBP17.87■□□□□ 0.45
HDLBP-229ENST00000460826 PARP10Q53GL7 1025 aa17.87■□□□□ 0.45
HDLBP-229ENST00000460826 NUTM1Q86Y26 1132 aa17.87■□□□□ 0.45
HDLBP-229ENST00000460826 ABCC12Q96J65 1359 aa17.87■□□□□ 0.45
HDLBP-229ENST00000460826 IBTKQ9P2D0 1353 aaPredicted RBP17.87■□□□□ 0.45
HDLBP-229ENST00000460826 PXDNLA1KZ92 1463 aa17.87■□□□□ 0.45
HDLBP-229ENST00000460826 BCAR3O75815 825 aa17.86■□□□□ 0.45
HDLBP-229ENST00000460826 IGKV5-2P06315 115 aa17.86■□□□□ 0.45
HDLBP-229ENST00000460826 DNAAF4Q8WXU2 420 aa17.86■□□□□ 0.45
HDLBP-229ENST00000460826 LAMB2P55268 1798 aa17.86■□□□□ 0.45
HDLBP-229ENST00000460826 DLEC1Q9Y238 1755 aa17.86■□□□□ 0.45
HDLBP-229ENST00000460826 TRIM28Q13263 835 aaKnown RBP17.85■□□□□ 0.45
HDLBP-229ENST00000460826 ERFEQ4G0M1 354 aa17.85■□□□□ 0.45
HDLBP-229ENST00000460826 TPTE2Q6XPS3 522 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms