RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 GCKRQ14397 625 aa17.05■□□□□ 0.32
PTPRN-210ENST00000460801 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
PTPRN-210ENST00000460801 BICC1Q9H694 974 aaKnown RBP17.05■□□□□ 0.32
PTPRN-210ENST00000460801 EVA1CP58658 441 aa17.04■□□□□ 0.32
PTPRN-210ENST00000460801 ERC1Q8IUD2 1116 aa17.04■□□□□ 0.32
PTPRN-210ENST00000460801 MYD88Q99836 296 aa17.04■□□□□ 0.32
PTPRN-210ENST00000460801 STRN4Q9NRL3 753 aa17.04■□□□□ 0.32
PTPRN-210ENST00000460801 ERBB4Q15303 1308 aa17.04■□□□□ 0.32
PTPRN-210ENST00000460801 OS9Q13438 667 aaPredicted RBP17.04■□□□□ 0.32
PTPRN-210ENST00000460801 CIZ1Q9ULV3 898 aaPredicted RBP17.04■□□□□ 0.32
PTPRN-210ENST00000460801 PIP4K2AP48426 406 aaPredicted RBP17.03■□□□□ 0.32
PTPRN-210ENST00000460801 PA2G4Q9UQ80 394 aaKnown RBP17.03■□□□□ 0.32
PTPRN-210ENST00000460801 TTC41PQ6P2S7 1318 aa17.03■□□□□ 0.32
PTPRN-210ENST00000460801 GSE1Q14687 1217 aa17.02■□□□□ 0.32
PTPRN-210ENST00000460801 PAPPAQ13219 1627 aa17.02■□□□□ 0.32
PTPRN-210ENST00000460801 CLASRPQ8N2M8 674 aaKnown RBP17.02■□□□□ 0.32
PTPRN-210ENST00000460801 AK9Q5TCS8 1911 aa17.02■□□□□ 0.31
PTPRN-210ENST00000460801 KCPQ6ZWJ8 1503 aa17.02■□□□□ 0.31
PTPRN-210ENST00000460801 ARFGEF2Q9Y6D5 1785 aa17.02■□□□□ 0.31
PTPRN-210ENST00000460801 PLBD2Q8NHP8 589 aa17.01■□□□□ 0.31
PTPRN-210ENST00000460801 DDX54Q8TDD1 881 aaKnown RBP17.01■□□□□ 0.31
PTPRN-210ENST00000460801 NBPF26B4DH59 902 aa17■□□□□ 0.31
PTPRN-210ENST00000460801 EPB41L2O43491 1005 aaKnown RBP17■□□□□ 0.31
PTPRN-210ENST00000460801 NBPF14Q5TI25 921 aa17■□□□□ 0.31
PTPRN-210ENST00000460801 NBPF10Q6P3W6 841 aaKnown RBP17■□□□□ 0.31
PTPRN-210ENST00000460801 NBPF15Q8N660 670 aa17■□□□□ 0.31
PTPRN-210ENST00000460801 COL15A1P39059 1388 aa17■□□□□ 0.31
PTPRN-210ENST00000460801 TNS2Q63HR2 1409 aa17■□□□□ 0.31
PTPRN-210ENST00000460801 MCM4P33991 863 aa17■□□□□ 0.31
PTPRN-210ENST00000460801 GLRX3O76003 335 aaKnown RBP16.99■□□□□ 0.31
PTPRN-210ENST00000460801 SASH1O94885 1247 aa16.99■□□□□ 0.31
PTPRN-210ENST00000460801 HSP90AA1P07900 732 aaKnown RBP16.99■□□□□ 0.31
PTPRN-210ENST00000460801 EPHA10Q5JZY3 1008 aa16.99■□□□□ 0.31
PTPRN-210ENST00000460801 AFDNP55196 1824 aaKnown RBP16.99■□□□□ 0.31
PTPRN-210ENST00000460801 G3BP1Q13283 466 aaKnown RBP eCLIP16.98■□□□□ 0.31
PTPRN-210ENST00000460801 CNTROBQ8N137 903 aa16.98■□□□□ 0.31
PTPRN-210ENST00000460801 IL17RAQ96F46 866 aa16.98■□□□□ 0.31
PTPRN-210ENST00000460801 ST18O60284 1047 aa16.98■□□□□ 0.31
PTPRN-210ENST00000460801 ECHDC1Q9NTX5 307 aa16.98■□□□□ 0.31
PTPRN-210ENST00000460801 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
PTPRN-210ENST00000460801 ANAPC15P60006 121 aa16.97■□□□□ 0.31
PTPRN-210ENST00000460801 ANO2Q9NQ90 1003 aa16.97■□□□□ 0.31
PTPRN-210ENST00000460801 BTG4Q9NY30 223 aa16.97■□□□□ 0.31
PTPRN-210ENST00000460801 TOGARAM1Q9Y4F4 1720 aa16.97■□□□□ 0.31
PTPRN-210ENST00000460801 IFIT2P09913 472 aaKnown RBP16.97■□□□□ 0.31
PTPRN-210ENST00000460801 MCCP23508 829 aa16.97■□□□□ 0.31
PTPRN-210ENST00000460801 RAB3GAP1Q15042 981 aa16.97■□□□□ 0.31
PTPRN-210ENST00000460801 RABL6Q3YEC7 729 aaPredicted RBP16.97■□□□□ 0.31
PTPRN-210ENST00000460801 IL25Q9H293 177 aa16.97■□□□□ 0.31
PTPRN-210ENST00000460801 GPATCH3Q96I76 525 aa16.96■□□□□ 0.31
PTPRN-210ENST00000460801 SGSM2O43147 1006 aa16.96■□□□□ 0.3
PTPRN-210ENST00000460801 CASP7P55210 303 aa16.96■□□□□ 0.3
PTPRN-210ENST00000460801 AACSQ86V21 672 aa16.96■□□□□ 0.3
PTPRN-210ENST00000460801 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.96■□□□□ 0.3
PTPRN-210ENST00000460801 ATP5J2-PTCD1G3V325 749 aa16.95■□□□□ 0.3
PTPRN-210ENST00000460801 PTCD1O75127 700 aaKnown RBP16.95■□□□□ 0.3
PTPRN-210ENST00000460801 A1BGP04217 495 aa16.95■□□□□ 0.3
PTPRN-210ENST00000460801 COL14A1Q05707 1796 aaKnown RBP16.95■□□□□ 0.3
PTPRN-210ENST00000460801 UBE3BQ7Z3V4 1068 aa16.95■□□□□ 0.3
PTPRN-210ENST00000460801 EAF2Q96CJ1 260 aaPredicted RBP16.95■□□□□ 0.3
PTPRN-210ENST00000460801 COPRSQ9NQ92 184 aa16.95■□□□□ 0.3
PTPRN-210ENST00000460801 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
PTPRN-210ENST00000460801 NUP188Q5SRE5 1749 aa16.95■□□□□ 0.3
PTPRN-210ENST00000460801 A0A087WZG4 1122 aa16.94■□□□□ 0.3
PTPRN-210ENST00000460801 RFX5P48382 616 aaPredicted RBP16.94■□□□□ 0.3
PTPRN-210ENST00000460801 PALD1Q9ULE6 856 aa16.94■□□□□ 0.3
PTPRN-210ENST00000460801 ROBO1Q9Y6N7 1651 aa16.94■□□□□ 0.3
PTPRN-210ENST00000460801 TTLL7Q6ZT98 887 aa16.94■□□□□ 0.3
PTPRN-210ENST00000460801 TNPO1Q92973 898 aaKnown RBP16.94■□□□□ 0.3
PTPRN-210ENST00000460801 TMOD3Q9NYL9 352 aa16.94■□□□□ 0.3
PTPRN-210ENST00000460801 AHDC1Q5TGY3 1603 aaPredicted RBP16.94■□□□□ 0.3
PTPRN-210ENST00000460801 DISP2A7MBM2 1401 aa16.94■□□□□ 0.3
PTPRN-210ENST00000460801 KLHDC4Q8TBB5 520 aa16.93■□□□□ 0.3
PTPRN-210ENST00000460801 JARID2Q92833 1246 aaPredicted RBP16.93■□□□□ 0.3
PTPRN-210ENST00000460801 SIL1Q9H173 461 aa16.93■□□□□ 0.3
PTPRN-210ENST00000460801 COL22A1Q8NFW1 1626 aaPredicted RBP16.93■□□□□ 0.3
PTPRN-210ENST00000460801 H7C1W4 665 aa16.93■□□□□ 0.3
PTPRN-210ENST00000460801 HSPA4P34932 840 aa16.92■□□□□ 0.3
PTPRN-210ENST00000460801 NEK4P51957 841 aa16.92■□□□□ 0.3
PTPRN-210ENST00000460801 PTPN12Q05209 780 aaKnown RBP16.92■□□□□ 0.3
PTPRN-210ENST00000460801 EVI5LQ96CN4 794 aa16.92■□□□□ 0.3
PTPRN-210ENST00000460801 RAD50Q92878 1312 aa16.91■□□□□ 0.3
PTPRN-210ENST00000460801 PIGBQ92521 554 aa16.91■□□□□ 0.3
PTPRN-210ENST00000460801 LSG1Q9H089 658 aaKnown RBP16.91■□□□□ 0.3
PTPRN-210ENST00000460801 CCDC8Q9H0W5 538 aaPredicted RBP16.91■□□□□ 0.3
PTPRN-210ENST00000460801 MCM2P49736 904 aa16.9■□□□□ 0.3
PTPRN-210ENST00000460801 VSIG10Q8N0Z9 540 aa16.9■□□□□ 0.3
PTPRN-210ENST00000460801 IL27Q8NEV9 243 aa16.9■□□□□ 0.3
PTPRN-210ENST00000460801 CWC25Q9NXE8 425 aaPredicted RBP16.9■□□□□ 0.3
PTPRN-210ENST00000460801 COL16A1Q07092 1604 aaPredicted RBP16.9■□□□□ 0.3
PTPRN-210ENST00000460801 DDX11L8A8MPP1 907 aa16.9■□□□□ 0.3
PTPRN-210ENST00000460801 CWC27Q6UX04 472 aaKnown RBP16.9■□□□□ 0.3
PTPRN-210ENST00000460801 CWC22Q9HCG8 908 aaKnown RBP16.9■□□□□ 0.3
PTPRN-210ENST00000460801 TLR7Q9NYK1 1049 aaKnown RBP16.9■□□□□ 0.3
PTPRN-210ENST00000460801 ITGB4P16144 1822 aa16.89■□□□□ 0.3
PTPRN-210ENST00000460801 FOXO4P98177 505 aa16.89■□□□□ 0.29
PTPRN-210ENST00000460801 CLEC17AQ6ZS10 378 aa16.89■□□□□ 0.29
PTPRN-210ENST00000460801 CCDC191Q8NCU4 936 aa16.89■□□□□ 0.29
PTPRN-210ENST00000460801 RUFY2Q8WXA3 655 aa16.89■□□□□ 0.29
PTPRN-210ENST00000460801 TEX13AQ9BXU3 409 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms