RNA–Protein interactions for RNA: ENST00000460675.5

COMMD6-206, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-206ENST00000460675 COL11A2P13942 1736 aaPredicted RBP14.16□□□□□ -0.14
COMMD6-206ENST00000460675 SRGNP10124 158 aa14.16□□□□□ -0.14
COMMD6-206ENST00000460675 EAPPQ56P03 285 aaPredicted RBP14.16□□□□□ -0.14
COMMD6-206ENST00000460675 LDHDQ86WU2 507 aa14.16□□□□□ -0.14
COMMD6-206ENST00000460675 IL17REQ8NFR9 667 aa14.16□□□□□ -0.14
COMMD6-206ENST00000460675 CNTNAP1P78357 1384 aa14.16□□□□□ -0.14
COMMD6-206ENST00000460675 SLX4Q8IY92 1834 aa14.15□□□□□ -0.14
COMMD6-206ENST00000460675 GNAT3A8MTJ3 354 aa14.15□□□□□ -0.14
COMMD6-206ENST00000460675 U2SURPO15042 1029 aaKnown RBP14.15□□□□□ -0.14
COMMD6-206ENST00000460675 CAMTA2O94983 1202 aa14.15□□□□□ -0.14
COMMD6-206ENST00000460675 CTCFP49711 727 aaPredicted RBP14.15□□□□□ -0.14
COMMD6-206ENST00000460675 VEGFBP49765 207 aa14.15□□□□□ -0.14
COMMD6-206ENST00000460675 DZIP3Q86Y13 1208 aaKnown RBP14.15□□□□□ -0.14
COMMD6-206ENST00000460675 FMNL2Q96PY5 1086 aa14.15□□□□□ -0.14
COMMD6-206ENST00000460675 TAF1DQ9H5J8 278 aaPredicted RBP14.15□□□□□ -0.14
COMMD6-206ENST00000460675 PRDM10Q9NQV6 1147 aa14.15□□□□□ -0.14
COMMD6-206ENST00000460675 CLEC11AQ9Y240 323 aa14.15□□□□□ -0.14
COMMD6-206ENST00000460675 PASKQ96RG2 1323 aa14.15□□□□□ -0.15
COMMD6-206ENST00000460675 CACNA1SQ13698 1873 aa14.14□□□□□ -0.15
COMMD6-206ENST00000460675 TMEM88BA6NKF7 163 aa14.14□□□□□ -0.15
COMMD6-206ENST00000460675 CC2D1BQ5T0F9 858 aaKnown RBP14.14□□□□□ -0.15
COMMD6-206ENST00000460675 GAS2L2Q8NHY3 880 aa14.14□□□□□ -0.15
COMMD6-206ENST00000460675 CLSPNQ9HAW4 1339 aa14.14□□□□□ -0.15
COMMD6-206ENST00000460675 SCN7AQ01118 1682 aa14.14□□□□□ -0.15
COMMD6-206ENST00000460675 CCDC93Q567U6 631 aa14.13□□□□□ -0.15
COMMD6-206ENST00000460675 NBPF5PQ86XG9 351 aaPredicted RBP14.13□□□□□ -0.15
COMMD6-206ENST00000460675 L3MBTL3Q96JM7 780 aaPredicted RBP14.13□□□□□ -0.15
COMMD6-206ENST00000460675 ITGBL1O95965 494 aaPredicted RBP14.12□□□□□ -0.15
COMMD6-206ENST00000460675 PIP4K2AP48426 406 aaPredicted RBP14.12□□□□□ -0.15
COMMD6-206ENST00000460675 CNGB1Q14028 1251 aaPredicted RBP14.12□□□□□ -0.15
COMMD6-206ENST00000460675 ZNF277Q9NRM2 450 aaPredicted RBP14.12□□□□□ -0.15
COMMD6-206ENST00000460675 HACL1Q9UJ83 578 aa14.12□□□□□ -0.15
COMMD6-206ENST00000460675 SCN4AP35499 1836 aa14.11□□□□□ -0.15
COMMD6-206ENST00000460675 BTBD11A6QL63 1104 aa14.11□□□□□ -0.15
COMMD6-206ENST00000460675 KCNQ3O43525 872 aa14.11□□□□□ -0.15
COMMD6-206ENST00000460675 NPR1P16066 1061 aa14.11□□□□□ -0.15
COMMD6-206ENST00000460675 LBX1P52954 281 aa14.11□□□□□ -0.15
COMMD6-206ENST00000460675 C7orf43Q8WVR3 580 aa14.11□□□□□ -0.15
COMMD6-206ENST00000460675 USP16Q9Y5T5 823 aa14.11□□□□□ -0.15
COMMD6-206ENST00000460675 ZNF541Q9H0D2 1346 aa14.11□□□□□ -0.15
COMMD6-206ENST00000460675 EPHX2P34913 555 aa14.1□□□□□ -0.15
COMMD6-206ENST00000460675 FKBP4Q02790 459 aaKnown RBP eCLIP14.1□□□□□ -0.15
COMMD6-206ENST00000460675 DEFB115Q30KQ5 88 aa14.1□□□□□ -0.15
COMMD6-206ENST00000460675 WBP1LQ9NX94 342 aa14.1□□□□□ -0.15
COMMD6-206ENST00000460675 ZNF652Q9Y2D9 606 aa14.1□□□□□ -0.15
COMMD6-206ENST00000460675 FAM177BA6PVY3 158 aa14.09□□□□□ -0.15
COMMD6-206ENST00000460675 OLFM4Q6UX06 510 aa14.09□□□□□ -0.15
COMMD6-206ENST00000460675 CLEC4GQ6UXB4 293 aa14.09□□□□□ -0.15
COMMD6-206ENST00000460675 TPTE2Q6XPS3 522 aa14.09□□□□□ -0.15
COMMD6-206ENST00000460675 PNMA8AQ86V59 439 aaPredicted RBP14.09□□□□□ -0.15
COMMD6-206ENST00000460675 RTKN2Q8IZC4 609 aa14.09□□□□□ -0.15
COMMD6-206ENST00000460675 CNTROBQ8N137 903 aa14.09□□□□□ -0.15
COMMD6-206ENST00000460675 ARFGEF2Q9Y6D5 1785 aa14.09□□□□□ -0.15
COMMD6-206ENST00000460675 PER1O15534 1290 aaPredicted RBP14.08□□□□□ -0.16
COMMD6-206ENST00000460675 MAP1SQ66K74 1059 aaPredicted RBP14.08□□□□□ -0.16
COMMD6-206ENST00000460675 NIP7Q9Y221 180 aaKnown RBP eCLIP14.08□□□□□ -0.16
COMMD6-206ENST00000460675 KIF7Q2M1P5 1343 aa14.08□□□□□ -0.16
COMMD6-206ENST00000460675 RNF123Q5XPI4 1314 aa14.08□□□□□ -0.16
COMMD6-206ENST00000460675 SIPA1L3O60292 1781 aaPredicted RBP14.07□□□□□ -0.16
COMMD6-206ENST00000460675 PRAMEF22A3QJZ6 481 aa14.07□□□□□ -0.16
COMMD6-206ENST00000460675 GTF2E1P29083 439 aaPredicted RBP14.07□□□□□ -0.16
COMMD6-206ENST00000460675 ALDH1B1P30837 517 aa14.07□□□□□ -0.16
COMMD6-206ENST00000460675 IARSP41252 1262 aaKnown RBP14.07□□□□□ -0.16
COMMD6-206ENST00000460675 SYNE4Q8N205 404 aa14.07□□□□□ -0.16
COMMD6-206ENST00000460675 ABT1Q9ULW3 272 aaKnown RBP14.07□□□□□ -0.16
COMMD6-206ENST00000460675 BCORQ6W2J9 1755 aa14.06□□□□□ -0.16
COMMD6-206ENST00000460675 KLRG2A4D1S0 409 aaPredicted RBP14.06□□□□□ -0.16
COMMD6-206ENST00000460675 RASSF10A6NK89 507 aa14.06□□□□□ -0.16
COMMD6-206ENST00000460675 SNRPA1P09661 255 aaKnown RBP14.06□□□□□ -0.16
COMMD6-206ENST00000460675 MAP2K1Q02750 393 aaPredicted RBP14.06□□□□□ -0.16
COMMD6-206ENST00000460675 JDP2Q8WYK2 163 aa14.06□□□□□ -0.16
COMMD6-206ENST00000460675 ABHD8Q96I13 439 aa14.06□□□□□ -0.16
COMMD6-206ENST00000460675 PHACTR3Q96KR7 559 aa14.06□□□□□ -0.16
COMMD6-206ENST00000460675 WDR33Q9C0J8 1336 aaKnown RBP14.06□□□□□ -0.16
COMMD6-206ENST00000460675 CEMIPQ8WUJ3 1361 aa14.06□□□□□ -0.16
COMMD6-206ENST00000460675 FZD9O00144 591 aa14.05□□□□□ -0.16
COMMD6-206ENST00000460675 HSPA8P11142 646 aaKnown RBP14.05□□□□□ -0.16
COMMD6-206ENST00000460675 PRKAR2BP31323 418 aa14.05□□□□□ -0.16
COMMD6-206ENST00000460675 GPC2Q8N158 579 aa14.05□□□□□ -0.16
COMMD6-206ENST00000460675 RTF1Q92541 710 aaKnown RBP14.05□□□□□ -0.16
COMMD6-206ENST00000460675 GJA3Q9Y6H8 435 aa14.05□□□□□ -0.16
COMMD6-206ENST00000460675 PAXIP1Q6ZW49 1069 aaPredicted RBP14.04□□□□□ -0.16
COMMD6-206ENST00000460675 NBPF26B4DH59 902 aa14.03□□□□□ -0.16
COMMD6-206ENST00000460675 LMOD1P29536 600 aaPredicted RBP14.03□□□□□ -0.16
COMMD6-206ENST00000460675 EIF6P56537 245 aaKnown RBP14.03□□□□□ -0.16
COMMD6-206ENST00000460675 GRM1Q13255 1194 aa14.03□□□□□ -0.16
COMMD6-206ENST00000460675 HLFQ16534 295 aa14.03□□□□□ -0.16
COMMD6-206ENST00000460675 NBPF10Q6P3W6 841 aaKnown RBP14.03□□□□□ -0.16
COMMD6-206ENST00000460675 MCM10Q7L590 875 aa14.03□□□□□ -0.16
COMMD6-206ENST00000460675 NBPF15Q8N660 670 aa14.03□□□□□ -0.16
COMMD6-206ENST00000460675 DDX21Q9NR30 783 aaKnown RBP eCLIP14.03□□□□□ -0.16
COMMD6-206ENST00000460675 COL3A1P02461 1466 aaPredicted RBP14.03□□□□□ -0.16
COMMD6-206ENST00000460675 ADAMTSL1Q8N6G6 1762 aa14.02□□□□□ -0.16
COMMD6-206ENST00000460675 FAM161AQ3B820 660 aa14.02□□□□□ -0.17
COMMD6-206ENST00000460675 BEGAINQ9BUH8 593 aa14.02□□□□□ -0.17
COMMD6-206ENST00000460675 NGEFQ8N5V2 710 aa14.01□□□□□ -0.17
COMMD6-206ENST00000460675 CFAP53Q96M91 514 aa14.01□□□□□ -0.17
COMMD6-206ENST00000460675 PSMD1Q99460 953 aa14.01□□□□□ -0.17
COMMD6-206ENST00000460675 RSPH6AQ9H0K4 717 aa14.01□□□□□ -0.17
COMMD6-206ENST00000460675 CCDC85CA6NKD9 419 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms